Protein–RNA interactions for Protein: Q9NQG7

HPS4, Hermansky-Pudlak syndrome 4 protein, humanhuman

Predictions only

Length 708 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HPS4Q9NQG7 BTD-202ENST00000383778 2261 ntAPPRIS ALT2 TSL 2 BASIC19.27■□□□□ 0.68
HPS4Q9NQG7 C21orf58-205ENST00000397683 1674 ntAPPRIS ALT2 TSL 2 BASIC19.27■□□□□ 0.68
HPS4Q9NQG7 PI4KB-213ENST00000529142 2603 ntTSL 2 BASIC19.27■□□□□ 0.68
HPS4Q9NQG7 HEXIM2-201ENST00000307275 1528 ntAPPRIS P1 TSL 2 BASIC19.27■□□□□ 0.68
HPS4Q9NQG7 PAX1-205ENST00000613128 5352 ntAPPRIS ALT2 TSL 1 (best) BASIC19.27■□□□□ 0.68
HPS4Q9NQG7 RAC1-201ENST00000348035 2323 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
HPS4Q9NQG7 ZNF575-201ENST00000314228 1298 ntAPPRIS P1 TSL 2 BASIC19.27■□□□□ 0.68
HPS4Q9NQG7 HIST1H2AI-201ENST00000358739 503 ntAPPRIS P1 BASIC19.27■□□□□ 0.68
HPS4Q9NQG7 MPIG6B-205ENST00000375810 910 ntAPPRIS ALT2 TSL 1 (best) BASIC19.27■□□□□ 0.68
HPS4Q9NQG7 SKP2-204ENST00000508514 821 ntTSL 3 BASIC19.27■□□□□ 0.68
HPS4Q9NQG7 NAPSB-203ENST00000531692 561 ntTSL 2 BASIC19.27■□□□□ 0.68
HPS4Q9NQG7 PRTN3-202ENST00000544537 1036 ntTSL 1 (best) BASIC19.27■□□□□ 0.68
HPS4Q9NQG7 TRAF7-205ENST00000567653 666 ntTSL 2 BASIC19.27■□□□□ 0.68
HPS4Q9NQG7 CLDN7-204ENST00000571881 735 ntTSL 3 BASIC19.27■□□□□ 0.68
HPS4Q9NQG7 CCDC106-206ENST00000591241 1153 ntTSL 3 BASIC19.27■□□□□ 0.68
HPS4Q9NQG7 AL136038.4-201ENST00000603606 1261 ntBASIC19.27■□□□□ 0.68
HPS4Q9NQG7 LRFN4-201ENST00000309602 2431 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
HPS4Q9NQG7 ECEL1-201ENST00000304546 2865 ntAPPRIS P3 TSL 1 (best) BASIC19.27■□□□□ 0.68
HPS4Q9NQG7 PRRT1-202ENST00000375150 1726 ntTSL 1 (best) BASIC19.27■□□□□ 0.68
HPS4Q9NQG7 CD19-206ENST00000567541 1707 ntAPPRIS ALT2 TSL 1 (best) BASIC19.27■□□□□ 0.68
HPS4Q9NQG7 HMGA1-205ENST00000447654 2159 ntAPPRIS P4 TSL 1 (best) BASIC19.27■□□□□ 0.68
HPS4Q9NQG7 AC125437.2-201ENST00000625180 2167 ntBASIC19.27■□□□□ 0.68
HPS4Q9NQG7 POLD2-201ENST00000223361 1597 ntTSL 5 BASIC19.27■□□□□ 0.67
HPS4Q9NQG7 TPD52-211ENST00000519303 1594 ntTSL 1 (best) BASIC19.27■□□□□ 0.67
HPS4Q9NQG7 EARS2-210ENST00000564501 2027 ntTSL 5 BASIC19.27■□□□□ 0.67
HPS4Q9NQG7 SASH1-201ENST00000367467 7711 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.67
HPS4Q9NQG7 AL109659.2-201ENST00000606809 1674 ntBASIC19.27■□□□□ 0.67
HPS4Q9NQG7 AMACR-205ENST00000426255 1316 ntTSL 2 BASIC19.26■□□□□ 0.67
HPS4Q9NQG7 PDE9A-206ENST00000380328 1875 ntTSL 1 (best) BASIC19.26■□□□□ 0.67
HPS4Q9NQG7 RDH13-203ENST00000415061 1871 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
HPS4Q9NQG7 PLEKHH3-204ENST00000591022 2983 ntAPPRIS P2 TSL 1 (best) BASIC19.26■□□□□ 0.67
HPS4Q9NQG7 DALRD3-201ENST00000313778 1968 ntTSL 2 BASIC19.26■□□□□ 0.67
HPS4Q9NQG7 RCC2P3-201ENST00000418112 1537 ntBASIC19.26■□□□□ 0.67
HPS4Q9NQG7 AL391807.1-203ENST00000604392 2365 ntBASIC19.26■□□□□ 0.67
HPS4Q9NQG7 ST3GAL4-217ENST00000534083 1919 ntAPPRIS ALT1 TSL 5 BASIC19.26■□□□□ 0.67
HPS4Q9NQG7 FUCA1-201ENST00000374479 2047 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
HPS4Q9NQG7 HAAO-201ENST00000294973 1265 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
HPS4Q9NQG7 S100A14-201ENST00000344616 1058 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
HPS4Q9NQG7 UBE2F-205ENST00000414443 2100 ntTSL 2 BASIC19.26■□□□□ 0.67
HPS4Q9NQG7 PRAP1-202ENST00000463201 587 ntAPPRIS ALT2 TSL 1 (best) BASIC19.26■□□□□ 0.67
HPS4Q9NQG7 KCTD10-211ENST00000540411 866 ntTSL 1 (best) BASIC19.26■□□□□ 0.67
HPS4Q9NQG7 MIR3652-201ENST00000579335 131 ntBASIC19.26■□□□□ 0.67
HPS4Q9NQG7 PRR29-207ENST00000580752 458 ntTSL 3 BASIC19.26■□□□□ 0.67
HPS4Q9NQG7 CADM1-222ENST00000616271 1246 ntTSL 5 BASIC19.26■□□□□ 0.67
HPS4Q9NQG7 SPEG-225ENST00000617028 815 ntTSL 5 BASIC19.26■□□□□ 0.67
HPS4Q9NQG7 AL691432.3-201ENST00000621860 400 ntBASIC19.26■□□□□ 0.67
HPS4Q9NQG7 SRP9-203ENST00000366839 1596 ntTSL 1 (best) BASIC19.26■□□□□ 0.67
HPS4Q9NQG7 AL512353.2-201ENST00000448759 1962 ntBASIC19.26■□□□□ 0.67
HPS4Q9NQG7 PKD2-201ENST00000237596 5056 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
HPS4Q9NQG7 AC008073.3-201ENST00000610442 2281 ntAPPRIS P1 TSL 2 BASIC19.26■□□□□ 0.67
HPS4Q9NQG7 NGLY1-202ENST00000280700 2473 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
HPS4Q9NQG7 RNF38-202ENST00000350199 5104 ntAPPRIS P1 TSL 5 BASIC19.26■□□□□ 0.67
HPS4Q9NQG7 ETV7-202ENST00000340181 1719 ntAPPRIS P3 TSL 1 (best) BASIC19.25■□□□□ 0.67
HPS4Q9NQG7 ELMOD1-206ENST00000531234 1832 ntTSL 2 BASIC19.25■□□□□ 0.67
HPS4Q9NQG7 FAM83E-201ENST00000263266 1926 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
HPS4Q9NQG7 AC008556.1-201ENST00000610908 2040 ntBASIC19.25■□□□□ 0.67
HPS4Q9NQG7 PTPRE-201ENST00000254667 5331 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
HPS4Q9NQG7 RIMBP3C-201ENST00000331505 5475 ntAPPRIS ALT2 BASIC19.25■□□□□ 0.67
HPS4Q9NQG7 CADPS-201ENST00000283269 4591 ntAPPRIS P4 TSL 1 (best) BASIC19.25■□□□□ 0.67
HPS4Q9NQG7 AC104581.1-201ENST00000324348 2852 ntAPPRIS P1 TSL 2 BASIC19.25■□□□□ 0.67
HPS4Q9NQG7 EML2-220ENST00000589876 2364 ntAPPRIS ALT2 TSL 1 (best) BASIC19.25■□□□□ 0.67
HPS4Q9NQG7 SLC16A5-202ENST00000450736 2051 ntAPPRIS P2 TSL 1 (best) BASIC19.25■□□□□ 0.67
HPS4Q9NQG7 ACD-214ENST00000620338 2065 ntAPPRIS ALT2 TSL 1 (best) BASIC19.25■□□□□ 0.67
HPS4Q9NQG7 RPRM-201ENST00000325926 1471 ntAPPRIS P1 BASIC19.25■□□□□ 0.67
HPS4Q9NQG7 AURKAIP1-202ENST00000338338 1047 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
HPS4Q9NQG7 PDLIM4-202ENST00000379018 1006 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
HPS4Q9NQG7 RPUSD3-201ENST00000383820 1225 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
HPS4Q9NQG7 IFT27-205ENST00000433985 1095 ntAPPRIS ALT1 TSL 1 (best) BASIC19.25■□□□□ 0.67
HPS4Q9NQG7 DYDC2-206ENST00000444807 1173 ntAPPRIS P3 TSL 3 BASIC19.25■□□□□ 0.67
HPS4Q9NQG7 MHENCR-202ENST00000449500 801 ntTSL 2 BASIC19.25■□□□□ 0.67
HPS4Q9NQG7 AC008825.1-201ENST00000504398 452 ntTSL 3 BASIC19.25■□□□□ 0.67
HPS4Q9NQG7 SELENOH-204ENST00000534355 818 ntAPPRIS P2 TSL 1 (best) BASIC19.25■□□□□ 0.67
HPS4Q9NQG7 YPEL3-204ENST00000563788 730 ntAPPRIS P1 TSL 3 BASIC19.25■□□□□ 0.67
HPS4Q9NQG7 MARK4-211ENST00000622871 1147 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
HPS4Q9NQG7 AL365255.1-201ENST00000637702 847 ntTSL 2 BASIC19.25■□□□□ 0.67
HPS4Q9NQG7 MARK2-208ENST00000508192 2924 ntAPPRIS P3 TSL 5 BASIC19.25■□□□□ 0.67
HPS4Q9NQG7 C1orf198-201ENST00000366663 3858 ntAPPRIS P3 TSL 1 (best) BASIC19.25■□□□□ 0.67
HPS4Q9NQG7 SLC6A18-201ENST00000324642 2121 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
HPS4Q9NQG7 NECAB3-202ENST00000375238 1942 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
HPS4Q9NQG7 PAIP1-203ENST00000436644 1734 ntAPPRIS ALT1 TSL 1 (best) BASIC19.25■□□□□ 0.67
HPS4Q9NQG7 CFAP77-203ENST00000393216 1638 ntAPPRIS ALT2 TSL 1 (best) BASIC19.25■□□□□ 0.67
HPS4Q9NQG7 HAUS4-218ENST00000555986 1626 ntTSL 5 BASIC19.25■□□□□ 0.67
HPS4Q9NQG7 SLC25A41-201ENST00000321510 1532 ntAPPRIS P1 TSL 5 BASIC19.25■□□□□ 0.67
HPS4Q9NQG7 CCK-202ENST00000396169 1527 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
HPS4Q9NQG7 MRAS-204ENST00000464896 1534 ntTSL 2 BASIC19.25■□□□□ 0.67
HPS4Q9NQG7 WNK2-202ENST00000395477 6834 ntAPPRIS ALT2 TSL 5 BASIC19.25■□□□□ 0.67
HPS4Q9NQG7 AQP11-201ENST00000313578 2152 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
HPS4Q9NQG7 FAM129C-208ENST00000599164 2073 ntAPPRIS ALT2 TSL 2 BASIC19.24■□□□□ 0.67
HPS4Q9NQG7 HS3ST3A1-201ENST00000284110 2527 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
HPS4Q9NQG7 TMEM104-202ENST00000417024 1781 ntTSL 2 BASIC19.24■□□□□ 0.67
HPS4Q9NQG7 PPFIA1-201ENST00000253925 5234 ntAPPRIS P4 TSL 1 (best) BASIC19.24■□□□□ 0.67
HPS4Q9NQG7 FAM182B-201ENST00000376403 1681 ntAPPRIS P5 TSL 1 (best) BASIC19.24■□□□□ 0.67
HPS4Q9NQG7 DSCC1-201ENST00000313655 2314 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
HPS4Q9NQG7 AC093525.10-201ENST00000625130 1569 ntBASIC19.24■□□□□ 0.67
HPS4Q9NQG7 MEN1-202ENST00000315422 3148 ntAPPRIS ALT1 TSL 5 BASIC19.24■□□□□ 0.67
HPS4Q9NQG7 ZNF655-203ENST00000357864 1370 ntTSL 2 BASIC19.24■□□□□ 0.67
HPS4Q9NQG7 MMP28-201ENST00000605424 1928 ntAPPRIS P3 TSL 1 (best) BASIC19.24■□□□□ 0.67
HPS4Q9NQG7 CHIC2-201ENST00000263921 1194 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
HPS4Q9NQG7 KCNK7-202ENST00000342202 1283 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
HPS4Q9NQG7 MIR662-201ENST00000384847 95 ntBASIC19.24■□□□□ 0.67
Retrieved 100 of 98,524 protein–RNA pairs in 25.3 ms