Protein–RNA interactions for Protein: Q9H6U6

BCAS3, Breast carcinoma-amplified sequence 3, humanhuman

Predictions only

Length 928 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
BCAS3Q9H6U6 LAT-204ENST00000395461 1448 ntAPPRIS ALT2 TSL 1 (best) BASIC20.95■□□□□ 0.95
BCAS3Q9H6U6 LDHAL6A-202ENST00000396213 1716 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
BCAS3Q9H6U6 TRIP4-201ENST00000261884 2045 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
BCAS3Q9H6U6 YY1AP1-213ENST00000405763 2011 ntAPPRIS ALT2 TSL 1 (best) BASIC20.95■□□□□ 0.94
BCAS3Q9H6U6 AL512380.2-201ENST00000637901 1780 ntTSL 5 BASIC20.95■□□□□ 0.94
BCAS3Q9H6U6 RGMB-207ENST00000513185 2052 ntAPPRIS ALT2 TSL 2 BASIC20.95■□□□□ 0.94
BCAS3Q9H6U6 SPATA20-226ENST00000619622 2769 ntAPPRIS P2 TSL 5 BASIC20.95■□□□□ 0.94
BCAS3Q9H6U6 SEPT6-202ENST00000354228 1576 ntAPPRIS P4 TSL 1 (best) BASIC20.95■□□□□ 0.94
BCAS3Q9H6U6 ANKRD13D-201ENST00000308440 2219 ntTSL 2 BASIC20.95■□□□□ 0.94
BCAS3Q9H6U6 HSD17B10-201ENST00000168216 960 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
BCAS3Q9H6U6 AL603832.1-201ENST00000421943 449 ntTSL 5 BASIC20.95■□□□□ 0.94
BCAS3Q9H6U6 AP1S2-206ENST00000545766 576 ntTSL 1 (best) BASIC20.95■□□□□ 0.94
BCAS3Q9H6U6 AC010240.3-201ENST00000607688 395 ntBASIC20.95■□□□□ 0.94
BCAS3Q9H6U6 NPAP1P7-201ENST00000613027 823 ntBASIC20.95■□□□□ 0.94
BCAS3Q9H6U6 AD000671.2-201ENST00000589807 1925 ntAPPRIS P1 TSL 2 BASIC20.95■□□□□ 0.94
BCAS3Q9H6U6 LRRC23-201ENST00000007969 1615 ntAPPRIS P4 TSL 1 (best) BASIC20.95■□□□□ 0.94
BCAS3Q9H6U6 TGFBR1-202ENST00000374994 6516 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
BCAS3Q9H6U6 NAT8L-202ENST00000423729 5870 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
BCAS3Q9H6U6 PPM1B-201ENST00000282412 2606 ntAPPRIS P4 TSL 1 (best) BASIC20.95■□□□□ 0.94
BCAS3Q9H6U6 CD7-206ENST00000583376 1659 ntTSL 1 (best) BASIC20.95■□□□□ 0.94
BCAS3Q9H6U6 SLC27A3-204ENST00000368661 2410 ntAPPRIS P2 TSL 1 (best) BASIC20.95■□□□□ 0.94
BCAS3Q9H6U6 PLIN5-201ENST00000381848 2470 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
BCAS3Q9H6U6 CDK18-217ENST00000506784 2143 ntTSL 1 (best) BASIC20.95■□□□□ 0.94
BCAS3Q9H6U6 POLE2-202ENST00000539565 1792 ntTSL 1 (best) BASIC20.95■□□□□ 0.94
BCAS3Q9H6U6 GPR142-201ENST00000335666 1437 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
BCAS3Q9H6U6 HOXB1-202ENST00000577092 1414 ntBASIC20.95■□□□□ 0.94
BCAS3Q9H6U6 LETM1-201ENST00000302787 5462 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
BCAS3Q9H6U6 AL357033.4-201ENST00000617703 1807 ntBASIC20.94■□□□□ 0.94
BCAS3Q9H6U6 LEMD2-201ENST00000293760 2958 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
BCAS3Q9H6U6 PLA2G7-201ENST00000274793 1882 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
BCAS3Q9H6U6 P2RY6-212ENST00000618468 2431 ntAPPRIS P1 TSL 3 BASIC20.94■□□□□ 0.94
BCAS3Q9H6U6 PTGIR-201ENST00000291294 2107 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
BCAS3Q9H6U6 C20orf196-201ENST00000303142 1154 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
BCAS3Q9H6U6 BEX1-201ENST00000372728 864 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
BCAS3Q9H6U6 ING5-202ENST00000406941 946 ntAPPRIS ALT1 TSL 1 (best) BASIC20.94■□□□□ 0.94
BCAS3Q9H6U6 PSMB11-201ENST00000408907 2110 ntAPPRIS P1 BASIC20.94■□□□□ 0.94
BCAS3Q9H6U6 PLAC8-202ENST00000411416 786 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
BCAS3Q9H6U6 AP000347.1-209ENST00000437294 557 ntTSL 4 BASIC20.94■□□□□ 0.94
BCAS3Q9H6U6 DUSP5P1-201ENST00000441325 1139 ntBASIC20.94■□□□□ 0.94
BCAS3Q9H6U6 LINC01293-201ENST00000453951 1266 ntTSL 1 (best) BASIC20.94■□□□□ 0.94
BCAS3Q9H6U6 AC008825.1-201ENST00000504398 452 ntTSL 3 BASIC20.94■□□□□ 0.94
BCAS3Q9H6U6 ZNF706-206ENST00000519744 785 ntTSL 3 BASIC20.94■□□□□ 0.94
BCAS3Q9H6U6 TCTN1-223ENST00000550703 2149 ntTSL 2 BASIC20.94■□□□□ 0.94
BCAS3Q9H6U6 RNF126P1-202ENST00000569893 925 ntBASIC20.94■□□□□ 0.94
BCAS3Q9H6U6 IFNL4-202ENST00000616270 1132 ntAPPRIS ALT2 TSL 1 (best) BASIC20.94■□□□□ 0.94
BCAS3Q9H6U6 AC012313.10-201ENST00000623509 926 ntBASIC20.94■□□□□ 0.94
BCAS3Q9H6U6 RASSF1-201ENST00000327761 1757 ntTSL 1 (best) BASIC20.94■□□□□ 0.94
BCAS3Q9H6U6 PGAM1-201ENST00000334828 1830 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
BCAS3Q9H6U6 EDC3-214ENST00000568176 1825 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
BCAS3Q9H6U6 AC016734.2-201ENST00000624325 1377 ntBASIC20.94■□□□□ 0.94
BCAS3Q9H6U6 IL4I1-201ENST00000341114 2349 ntAPPRIS P4 TSL 1 (best) BASIC20.94■□□□□ 0.94
BCAS3Q9H6U6 PRKCSH-209ENST00000589838 1898 ntAPPRIS P3 TSL 1 (best) BASIC20.94■□□□□ 0.94
BCAS3Q9H6U6 PCID2-203ENST00000375457 2372 ntTSL 1 (best) BASIC20.94■□□□□ 0.94
BCAS3Q9H6U6 LINC02028-204ENST00000449350 1419 ntTSL 3 BASIC20.94■□□□□ 0.94
BCAS3Q9H6U6 MGAT3-201ENST00000341184 5062 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
BCAS3Q9H6U6 MTMR9LP-203ENST00000426597 1545 ntBASIC20.94■□□□□ 0.94
BCAS3Q9H6U6 AL162741.1-201ENST00000565563 1558 ntBASIC20.93■□□□□ 0.94
BCAS3Q9H6U6 EWSR1-208ENST00000414183 2189 ntAPPRIS P4 TSL 2 BASIC20.93■□□□□ 0.94
BCAS3Q9H6U6 NFATC4-220ENST00000555393 2235 ntTSL 1 (best) BASIC20.93■□□□□ 0.94
BCAS3Q9H6U6 AIRE-201ENST00000291582 2257 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
BCAS3Q9H6U6 AGO3-202ENST00000324350 1726 ntTSL 2 BASIC20.93■□□□□ 0.94
BCAS3Q9H6U6 LINC00466-207ENST00000634725 1736 ntTSL 5 BASIC20.93■□□□□ 0.94
BCAS3Q9H6U6 SNAP47-202ENST00000366759 2362 ntAPPRIS P3 TSL 1 (best) BASIC20.93■□□□□ 0.94
BCAS3Q9H6U6 GHDC-212ENST00000593209 1827 ntTSL 5 BASIC20.93■□□□□ 0.94
BCAS3Q9H6U6 AC114490.1-202ENST00000311990 1887 ntTSL 1 (best) BASIC20.93■□□□□ 0.94
BCAS3Q9H6U6 TNFRSF10C-202ENST00000397703 1242 ntTSL 2 BASIC20.93■□□□□ 0.94
BCAS3Q9H6U6 DECR2-202ENST00000424398 1012 ntTSL 5 BASIC20.93■□□□□ 0.94
BCAS3Q9H6U6 HCG4P8-203ENST00000443049 980 ntBASIC20.93■□□□□ 0.94
BCAS3Q9H6U6 NAT14-202ENST00000587400 416 ntTSL 5 BASIC20.93■□□□□ 0.94
BCAS3Q9H6U6 AL136038.4-201ENST00000603606 1261 ntBASIC20.93■□□□□ 0.94
BCAS3Q9H6U6 E4F1-201ENST00000301727 2573 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
BCAS3Q9H6U6 NKX1-2-201ENST00000451024 3364 ntAPPRIS P1 TSL 5 BASIC20.93■□□□□ 0.94
BCAS3Q9H6U6 SPSB3-201ENST00000301717 1449 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
BCAS3Q9H6U6 MOXD1-203ENST00000392401 2191 ntTSL 4 BASIC20.93■□□□□ 0.94
BCAS3Q9H6U6 EMX1-202ENST00000394111 1528 ntTSL 3 BASIC20.93■□□□□ 0.94
BCAS3Q9H6U6 SKOR2-202ENST00000425639 3899 ntAPPRIS ALT2 TSL 5 BASIC20.93■□□□□ 0.94
BCAS3Q9H6U6 ZNF655-202ENST00000320583 1601 ntTSL 1 (best) BASIC20.93■□□□□ 0.94
BCAS3Q9H6U6 WDR18-202ENST00000585809 1608 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
BCAS3Q9H6U6 WDR34-201ENST00000372715 1755 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
BCAS3Q9H6U6 CERS5-203ENST00000422340 2855 ntAPPRIS ALT2 TSL 2 BASIC20.92■□□□□ 0.94
BCAS3Q9H6U6 C11orf80-214ENST00000532565 1948 ntAPPRIS ALT2 TSL 5 BASIC20.92■□□□□ 0.94
BCAS3Q9H6U6 SLC6A7-203ENST00000524041 2431 ntTSL 5 BASIC20.92■□□□□ 0.94
BCAS3Q9H6U6 CD1E-211ENST00000368166 1271 ntTSL 1 (best) BASIC20.92■□□□□ 0.94
BCAS3Q9H6U6 ELOB-202ENST00000409477 997 ntTSL 1 (best) BASIC20.92■□□□□ 0.94
BCAS3Q9H6U6 LAMTOR4-205ENST00000468582 621 ntTSL 2 BASIC20.92■□□□□ 0.94
BCAS3Q9H6U6 AC011498.5-201ENST00000592027 486 ntBASIC20.92■□□□□ 0.94
BCAS3Q9H6U6 AL121894.2-201ENST00000602977 491 ntBASIC20.92■□□□□ 0.94
BCAS3Q9H6U6 AC092119.3-201ENST00000612618 583 ntBASIC20.92■□□□□ 0.94
BCAS3Q9H6U6 BCL10-202ENST00000620248 774 ntTSL 5 BASIC20.92■□□□□ 0.94
BCAS3Q9H6U6 PTPRM-211ENST00000580170 5941 ntAPPRIS ALT2 TSL 1 (best) BASIC20.92■□□□□ 0.94
BCAS3Q9H6U6 AUTS2-203ENST00000406775 5950 ntAPPRIS ALT2 TSL 1 (best) BASIC20.92■□□□□ 0.94
BCAS3Q9H6U6 GRB7-202ENST00000394204 1667 ntTSL 1 (best) BASIC20.92■□□□□ 0.94
BCAS3Q9H6U6 AP5S1-202ENST00000379567 1791 ntAPPRIS P1 TSL 2 BASIC20.92■□□□□ 0.94
BCAS3Q9H6U6 DMD-208ENST00000378680 1858 ntTSL 1 (best) BASIC20.92■□□□□ 0.94
BCAS3Q9H6U6 CTBP2-214ENST00000531469 1918 ntAPPRIS P1 TSL 2 BASIC20.92■□□□□ 0.94
BCAS3Q9H6U6 RAB11FIP5-201ENST00000258098 4342 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
BCAS3Q9H6U6 GFER-201ENST00000248114 2345 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
BCAS3Q9H6U6 MEN1-205ENST00000377316 2868 ntTSL 5 BASIC20.91■□□□□ 0.94
BCAS3Q9H6U6 REEP2-201ENST00000254901 2099 ntAPPRIS P3 TSL 1 (best) BASIC20.91■□□□□ 0.94
BCAS3Q9H6U6 LUC7L-201ENST00000293872 1456 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
Retrieved 100 of 98,524 protein–RNA pairs in 19.7 ms