Protein–RNA interactions for Protein: Q9H4P4

RNF41, E3 ubiquitin-protein ligase NRDP1, humanhuman

Predicted RBP Predictions only

Length 317 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNF41Q9H4P4 PKD2-201ENST00000237596 5056 ntAPPRIS P1 TSL 1 (best) BASIC21.99■■□□□ 1.11
RNF41Q9H4P4 CAV2-201ENST00000222693 3301 ntAPPRIS P1 TSL 1 (best) BASIC21.98■■□□□ 1.11
RNF41Q9H4P4 LINC01819-201ENST00000422351 2156 ntTSL 5 BASIC21.98■■□□□ 1.11
RNF41Q9H4P4 TNXA-203ENST00000507684 2038 ntBASIC21.98■■□□□ 1.11
RNF41Q9H4P4 KLK14-201ENST00000156499 1060 ntAPPRIS P1 TSL 1 (best) BASIC21.98■■□□□ 1.11
RNF41Q9H4P4 PAX3-201ENST00000258387 958 ntTSL 1 (best) BASIC21.98■■□□□ 1.11
RNF41Q9H4P4 C6orf48-206ENST00000375641 602 ntAPPRIS P1 TSL 2 BASIC21.98■■□□□ 1.11
RNF41Q9H4P4 MIEN1-201ENST00000394231 1006 ntAPPRIS P1 TSL 1 (best) BASIC21.98■■□□□ 1.11
RNF41Q9H4P4 IMP3-202ENST00000403490 1237 ntAPPRIS P1 BASIC21.98■■□□□ 1.11
RNF41Q9H4P4 DMKN-208ENST00000424570 1293 ntAPPRIS ALT2 TSL 1 (best) BASIC21.98■■□□□ 1.11
RNF41Q9H4P4 C12orf43-206ENST00000537817 1270 ntAPPRIS ALT2 TSL 1 (best) BASIC21.98■■□□□ 1.11
RNF41Q9H4P4 LTBR-211ENST00000543190 785 ntTSL 3 BASIC21.98■■□□□ 1.11
RNF41Q9H4P4 ETFA-216ENST00000560726 942 ntTSL 3 BASIC21.98■■□□□ 1.11
RNF41Q9H4P4 ULK4P3-205ENST00000568486 1158 ntTSL 1 (best) BASIC21.98■■□□□ 1.11
RNF41Q9H4P4 MED9-202ENST00000580462 565 ntTSL 1 (best) BASIC21.98■■□□□ 1.11
RNF41Q9H4P4 C17orf62-221ENST00000581196 668 ntTSL 4 BASIC21.98■■□□□ 1.11
RNF41Q9H4P4 MIR3180-4-201ENST00000582223 153 ntBASIC21.98■■□□□ 1.11
RNF41Q9H4P4 EDNRA-206ENST00000511804 1569 ntTSL 2 BASIC21.98■■□□□ 1.11
RNF41Q9H4P4 NRXN1-208ENST00000405472 5724 ntAPPRIS ALT2 TSL 5 BASIC21.98■■□□□ 1.11
RNF41Q9H4P4 MTERF2-202ENST00000392830 1763 ntAPPRIS P1 TSL 1 (best) BASIC21.97■■□□□ 1.11
RNF41Q9H4P4 NBPF9-209ENST00000621645 5632 ntAPPRIS ALT2 TSL 2 BASIC21.97■■□□□ 1.11
RNF41Q9H4P4 SEPT2-203ENST00000391971 3315 ntAPPRIS P1 TSL 1 (best) BASIC21.97■■□□□ 1.11
RNF41Q9H4P4 MYH14-208ENST00000598205 6137 ntAPPRIS P3 TSL 5 BASIC21.97■■□□□ 1.11
RNF41Q9H4P4 PCSK7-201ENST00000320934 4649 ntAPPRIS P1 TSL 1 (best) BASIC21.97■■□□□ 1.11
RNF41Q9H4P4 AP001351.1-201ENST00000501397 1865 ntTSL 2 BASIC21.97■■□□□ 1.11
RNF41Q9H4P4 ARRDC2-201ENST00000222250 2503 ntAPPRIS P1 TSL 1 (best) BASIC21.97■■□□□ 1.11
RNF41Q9H4P4 IL17RC-215ENST00000455057 2244 ntAPPRIS ALT2 TSL 1 (best) BASIC21.97■■□□□ 1.11
RNF41Q9H4P4 CHTOP-202ENST00000368687 1094 ntTSL 1 (best) BASIC21.97■■□□□ 1.11
RNF41Q9H4P4 HOMER2P1-201ENST00000455653 964 ntBASIC21.97■■□□□ 1.11
RNF41Q9H4P4 AC063952.2-201ENST00000498792 1227 ntBASIC21.97■■□□□ 1.11
RNF41Q9H4P4 APBB3-216ENST00000511201 1014 ntTSL 5 BASIC21.97■■□□□ 1.11
RNF41Q9H4P4 CD81-212ENST00000526072 1172 ntTSL 5 BASIC21.97■■□□□ 1.11
RNF41Q9H4P4 C14orf144-201ENST00000553757 537 ntTSL 4 BASIC21.97■■□□□ 1.11
RNF41Q9H4P4 UQCR11-201ENST00000585671 753 ntAPPRIS P1 TSL 1 (best) BASIC21.97■■□□□ 1.11
RNF41Q9H4P4 UBA52-210ENST00000598780 668 ntAPPRIS P1 TSL 3 BASIC21.97■■□□□ 1.11
RNF41Q9H4P4 FPGS-203ENST00000373247 2279 ntAPPRIS P1 TSL 1 (best) BASIC21.97■■□□□ 1.11
RNF41Q9H4P4 SIGIRR-220ENST00000531205 1649 ntTSL 2 BASIC21.97■■□□□ 1.11
RNF41Q9H4P4 ZDHHC20-201ENST00000320220 1351 ntTSL 1 (best) BASIC21.97■■□□□ 1.11
RNF41Q9H4P4 GPR75-201ENST00000394705 2115 ntAPPRIS P1 TSL 1 (best) BASIC21.97■■□□□ 1.11
RNF41Q9H4P4 KRT8P50-201ENST00000562022 1438 ntBASIC21.97■■□□□ 1.11
RNF41Q9H4P4 CORO6-212ENST00000584969 1416 ntAPPRIS ALT1 TSL 5 BASIC21.97■■□□□ 1.11
RNF41Q9H4P4 MAGED2-213ENST00000627068 1811 ntAPPRIS ALT2 TSL 5 BASIC21.96■■□□□ 1.11
RNF41Q9H4P4 L3HYPDH-201ENST00000247194 1527 ntAPPRIS P1 TSL 1 (best) BASIC21.96■■□□□ 1.11
RNF41Q9H4P4 SARAF-214ENST00000545648 1976 ntTSL 1 (best) BASIC21.96■■□□□ 1.11
RNF41Q9H4P4 GGCT-202ENST00000275428 1173 ntAPPRIS P1 TSL 1 (best) BASIC21.96■■□□□ 1.11
RNF41Q9H4P4 UXT-201ENST00000333119 574 ntAPPRIS P1 TSL 1 (best) BASIC21.96■■□□□ 1.11
RNF41Q9H4P4 SUV39H2-204ENST00000378325 1292 ntTSL 1 (best) BASIC21.96■■□□□ 1.11
RNF41Q9H4P4 YPEL3-201ENST00000398838 935 ntAPPRIS P1 TSL 1 (best) BASIC21.96■■□□□ 1.11
RNF41Q9H4P4 AC034232.1-201ENST00000506026 1064 ntBASIC21.96■■□□□ 1.11
RNF41Q9H4P4 ZNF706-206ENST00000519744 785 ntTSL 3 BASIC21.96■■□□□ 1.11
RNF41Q9H4P4 LY6E-210ENST00000521182 1079 ntTSL 1 (best) BASIC21.96■■□□□ 1.11
RNF41Q9H4P4 AL049597.2-201ENST00000565575 961 ntBASIC21.96■■□□□ 1.11
RNF41Q9H4P4 LINC01238-205ENST00000567549 1107 ntBASIC21.96■■□□□ 1.11
RNF41Q9H4P4 NAT14-202ENST00000587400 416 ntTSL 5 BASIC21.96■■□□□ 1.11
RNF41Q9H4P4 BDKRB1-204ENST00000611804 1085 ntAPPRIS P1 BASIC21.96■■□□□ 1.11
RNF41Q9H4P4 WFDC1-203ENST00000568638 1319 ntAPPRIS P1 TSL 2 BASIC21.96■■□□□ 1.11
RNF41Q9H4P4 SEMA3B-202ENST00000418576 1765 ntTSL 2 BASIC21.96■■□□□ 1.11
RNF41Q9H4P4 P2RY2-201ENST00000311131 2660 ntAPPRIS P1 TSL 1 (best) BASIC21.96■■□□□ 1.11
RNF41Q9H4P4 KSR1-205ENST00000509603 2731 ntAPPRIS ALT2 TSL 5 BASIC21.96■■□□□ 1.11
RNF41Q9H4P4 ZMYM5-202ENST00000382905 1382 ntTSL 1 (best) BASIC21.96■■□□□ 1.11
RNF41Q9H4P4 SLC26A11-212ENST00000572725 1862 ntAPPRIS P1 TSL 1 (best) BASIC21.96■■□□□ 1.11
RNF41Q9H4P4 RAB29-205ENST00000446390 1441 ntTSL 2 BASIC21.96■■□□□ 1.11
RNF41Q9H4P4 STX11-201ENST00000367568 1926 ntAPPRIS P1 TSL 1 (best) BASIC21.96■■□□□ 1.11
RNF41Q9H4P4 ZNF768-202ENST00000562803 1999 ntAPPRIS ALT2 TSL 3 BASIC21.96■■□□□ 1.11
RNF41Q9H4P4 FAM160A2-201ENST00000265978 3481 ntAPPRIS P3 TSL 1 (best) BASIC21.96■■□□□ 1.11
RNF41Q9H4P4 TMEM176A-210ENST00000484928 1530 ntAPPRIS P2 TSL 5 BASIC21.96■■□□□ 1.11
RNF41Q9H4P4 MFSD10-205ENST00000507555 1573 ntTSL 5 BASIC21.95■■□□□ 1.11
RNF41Q9H4P4 PTRH1-204ENST00000419060 2692 ntAPPRIS P1 TSL 2 BASIC21.95■■□□□ 1.1
RNF41Q9H4P4 TP53I3-202ENST00000335934 1635 ntAPPRIS P1 TSL 1 (best) BASIC21.95■■□□□ 1.1
RNF41Q9H4P4 SLC2A14-214ENST00000542505 1650 ntTSL 1 (best) BASIC21.95■■□□□ 1.1
RNF41Q9H4P4 RGS3-231ENST00000613049 1726 ntTSL 1 (best) BASIC21.95■■□□□ 1.1
RNF41Q9H4P4 DEF8-211ENST00000563795 1767 ntTSL 5 BASIC21.95■■□□□ 1.1
RNF41Q9H4P4 KLC1-217ENST00000554280 2426 ntTSL 5 BASIC21.95■■□□□ 1.1
RNF41Q9H4P4 MYO15B-232ENST00000610510 9195 ntAPPRIS P1 TSL 5 BASIC21.95■■□□□ 1.1
RNF41Q9H4P4 GCDH-216ENST00000591470 1867 ntAPPRIS P1 TSL 1 (best) BASIC21.95■■□□□ 1.1
RNF41Q9H4P4 FGF8-202ENST00000344255 707 ntTSL 1 (best) BASIC21.95■■□□□ 1.1
RNF41Q9H4P4 LCE4A-202ENST00000368777 672 ntAPPRIS P1 TSL 2 BASIC21.95■■□□□ 1.1
RNF41Q9H4P4 C7orf49-209ENST00000483029 596 ntTSL 2 BASIC21.95■■□□□ 1.1
RNF41Q9H4P4 CNTD2-203ENST00000513948 787 ntAPPRIS ALT2 TSL 2 BASIC21.95■■□□□ 1.1
RNF41Q9H4P4 REEP1-207ENST00000535845 1196 ntTSL 2 BASIC21.95■■□□□ 1.1
RNF41Q9H4P4 MFGE8-203ENST00000542878 1172 ntTSL 2 BASIC21.95■■□□□ 1.1
RNF41Q9H4P4 ELAC2-212ENST00000578071 579 ntTSL 4 BASIC21.95■■□□□ 1.1
RNF41Q9H4P4 AC020911.2-202ENST00000588945 593 ntTSL 3 BASIC21.95■■□□□ 1.1
RNF41Q9H4P4 AC010240.3-201ENST00000607688 395 ntBASIC21.95■■□□□ 1.1
RNF41Q9H4P4 WNK1-203ENST00000447667 1902 ntTSL 1 (best) BASIC21.95■■□□□ 1.1
RNF41Q9H4P4 CXXC5-201ENST00000302517 2658 ntAPPRIS P1 TSL 1 (best) BASIC21.95■■□□□ 1.1
RNF41Q9H4P4 PLK5-201ENST00000334770 2106 ntAPPRIS P2 TSL 2 BASIC21.95■■□□□ 1.1
RNF41Q9H4P4 CRADD-202ENST00000542893 1403 ntAPPRIS P1 TSL 1 (best) BASIC21.95■■□□□ 1.1
RNF41Q9H4P4 ENDOV-225ENST00000522751 1475 ntTSL 5 BASIC21.95■■□□□ 1.1
RNF41Q9H4P4 MRAS-204ENST00000464896 1534 ntTSL 2 BASIC21.95■■□□□ 1.1
RNF41Q9H4P4 SLC12A4-202ENST00000422611 4670 ntTSL 2 BASIC21.95■■□□□ 1.1
RNF41Q9H4P4 CRTC1-203ENST00000594658 2384 ntTSL 1 (best) BASIC21.95■■□□□ 1.1
RNF41Q9H4P4 PPP1R3F-202ENST00000376188 2443 ntTSL 2 BASIC21.95■■□□□ 1.1
RNF41Q9H4P4 GCGR-202ENST00000570996 1872 ntAPPRIS ALT2 TSL 2 BASIC21.94■■□□□ 1.1
RNF41Q9H4P4 JPH2-201ENST00000342272 1923 ntTSL 1 (best) BASIC21.94■■□□□ 1.1
RNF41Q9H4P4 SEMA6C-210ENST00000621728 1918 ntTSL 1 (best) BASIC21.94■■□□□ 1.1
RNF41Q9H4P4 SLC35B2-207ENST00000619636 2063 ntTSL 1 (best) BASIC21.94■■□□□ 1.1
RNF41Q9H4P4 TMEM53-202ENST00000372237 2310 ntAPPRIS P1 TSL 1 (best) BASIC21.94■■□□□ 1.1
RNF41Q9H4P4 ADAMTS10-205ENST00000595838 2458 ntTSL 2 BASIC21.94■■□□□ 1.1
RNF41Q9H4P4 PIEZO1-202ENST00000327397 1246 ntTSL 2 BASIC21.94■■□□□ 1.1
Retrieved 100 of 98,524 protein–RNA pairs in 28.4 ms