Protein–RNA interactions for Protein: Q9C0D0

PHACTR1, Phosphatase and actin regulator 1, humanhuman

Predictions only

Length 580 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PHACTR1Q9C0D0 ZSCAN18-201ENST00000240727 2779 ntAPPRIS P3 TSL 1 (best) BASIC18.93■□□□□ 0.62
PHACTR1Q9C0D0 AC067852.2-201ENST00000590513 2313 ntBASIC18.92■□□□□ 0.62
PHACTR1Q9C0D0 POR-209ENST00000439269 1858 ntTSL 2 BASIC18.92■□□□□ 0.62
PHACTR1Q9C0D0 HSPA4-205ENST00000617074 2358 ntTSL 5 BASIC18.92■□□□□ 0.62
PHACTR1Q9C0D0 ZC3H12D-201ENST00000409806 5791 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
PHACTR1Q9C0D0 ALDH3A1-206ENST00000457500 1925 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
PHACTR1Q9C0D0 SKOR1-203ENST00000554054 3620 ntAPPRIS ALT2 TSL 5 BASIC18.92■□□□□ 0.62
PHACTR1Q9C0D0 EEF1AKMT2-201ENST00000368836 1462 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
PHACTR1Q9C0D0 CDC14B-208ENST00000463569 1734 ntAPPRIS ALT2 TSL 5 BASIC18.92■□□□□ 0.62
PHACTR1Q9C0D0 STIM2-212ENST00000639640 2241 ntAPPRIS P3 TSL 1 (best) BASIC18.92■□□□□ 0.62
PHACTR1Q9C0D0 FOXP1-214ENST00000493089 2703 ntAPPRIS ALT1 TSL 2 BASIC18.92■□□□□ 0.62
PHACTR1Q9C0D0 MAPKAP1-205ENST00000373503 3045 ntTSL 1 (best) BASIC18.92■□□□□ 0.62
PHACTR1Q9C0D0 CALM3-201ENST00000291295 2289 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
PHACTR1Q9C0D0 SNX17-201ENST00000233575 2044 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
PHACTR1Q9C0D0 RCC2P3-201ENST00000418112 1537 ntBASIC18.92■□□□□ 0.62
PHACTR1Q9C0D0 TTC9B-201ENST00000311308 843 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
PHACTR1Q9C0D0 MRGPRG-201ENST00000332314 870 ntAPPRIS P1 BASIC18.92■□□□□ 0.62
PHACTR1Q9C0D0 PHOSPHO2-201ENST00000359744 1125 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
PHACTR1Q9C0D0 DUSP23-201ENST00000368107 756 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
PHACTR1Q9C0D0 SERF2-207ENST00000409614 582 ntTSL 2 BASIC18.92■□□□□ 0.62
PHACTR1Q9C0D0 PPP1R14BP5-201ENST00000440334 435 ntBASIC18.92■□□□□ 0.62
PHACTR1Q9C0D0 AC026366.1-201ENST00000488803 879 ntBASIC18.92■□□□□ 0.62
PHACTR1Q9C0D0 SCARA5-203ENST00000518030 1074 ntTSL 1 (best) BASIC18.92■□□□□ 0.62
PHACTR1Q9C0D0 CFL2-205ENST00000555765 632 ntTSL 2 BASIC18.92■□□□□ 0.62
PHACTR1Q9C0D0 AC140479.4-201ENST00000561715 463 ntTSL 4 BASIC18.92■□□□□ 0.62
PHACTR1Q9C0D0 CLN6-207ENST00000566347 981 ntTSL 1 (best) BASIC18.92■□□□□ 0.62
PHACTR1Q9C0D0 AC026271.3-201ENST00000571884 352 ntBASIC18.92■□□□□ 0.62
PHACTR1Q9C0D0 LRRN4CL-201ENST00000317449 2585 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
PHACTR1Q9C0D0 DDX42-202ENST00000389924 3939 ntAPPRIS P1 TSL 5 BASIC18.92■□□□□ 0.62
PHACTR1Q9C0D0 FAM213B-202ENST00000378425 2665 ntAPPRIS ALT2 TSL 2 BASIC18.92■□□□□ 0.62
PHACTR1Q9C0D0 LGALS12-203ENST00000394618 1618 ntAPPRIS P3 TSL 1 (best) BASIC18.92■□□□□ 0.62
PHACTR1Q9C0D0 PAQR6-201ENST00000292291 1908 ntAPPRIS P3 TSL 1 (best) BASIC18.92■□□□□ 0.62
PHACTR1Q9C0D0 SPART-209ENST00000494062 3018 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
PHACTR1Q9C0D0 AL109659.2-201ENST00000606809 1674 ntBASIC18.92■□□□□ 0.62
PHACTR1Q9C0D0 TICAM1-202ENST00000621756 1650 ntTSL 5 BASIC18.92■□□□□ 0.62
PHACTR1Q9C0D0 HOXC13-AS-201ENST00000512916 1408 ntTSL 3 BASIC18.91■□□□□ 0.62
PHACTR1Q9C0D0 PAK4-201ENST00000321944 2555 ntTSL 1 (best) BASIC18.91■□□□□ 0.62
PHACTR1Q9C0D0 BPIFB3-201ENST00000375494 1454 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
PHACTR1Q9C0D0 MOCS2-202ENST00000396954 1785 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
PHACTR1Q9C0D0 BRMS1L-201ENST00000216807 2657 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
PHACTR1Q9C0D0 ACTN4-202ENST00000390009 2102 ntTSL 1 (best) BASIC18.91■□□□□ 0.62
PHACTR1Q9C0D0 GPS1-201ENST00000306823 1842 ntAPPRIS P3 TSL 1 (best) BASIC18.91■□□□□ 0.62
PHACTR1Q9C0D0 FOXD4L1-201ENST00000306507 2491 ntAPPRIS P1 BASIC18.91■□□□□ 0.62
PHACTR1Q9C0D0 AP001476.1-201ENST00000451618 2198 ntTSL 2 BASIC18.91■□□□□ 0.62
PHACTR1Q9C0D0 ISG20-201ENST00000306072 1856 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
PHACTR1Q9C0D0 TNNC1-201ENST00000232975 714 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
PHACTR1Q9C0D0 NDUFA12-201ENST00000327772 635 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
PHACTR1Q9C0D0 OGG1-209ENST00000383826 1069 ntTSL 5 BASIC18.91■□□□□ 0.62
PHACTR1Q9C0D0 APTR-205ENST00000447009 902 ntTSL 2 BASIC18.91■□□□□ 0.62
PHACTR1Q9C0D0 MFSD4A-206ENST00000489709 1136 ntTSL 5 BASIC18.91■□□□□ 0.62
PHACTR1Q9C0D0 EMC9-206ENST00000560403 872 ntTSL 2 BASIC18.91■□□□□ 0.62
PHACTR1Q9C0D0 ULK3-220ENST00000569437 2611 ntAPPRIS ALT1 TSL 1 (best) BASIC18.91■□□□□ 0.62
PHACTR1Q9C0D0 MATN4-205ENST00000537548 1991 ntAPPRIS ALT2 TSL 5 BASIC18.91■□□□□ 0.62
PHACTR1Q9C0D0 HOXD12-202ENST00000406506 1318 ntAPPRIS P1 TSL 3 BASIC18.91■□□□□ 0.62
PHACTR1Q9C0D0 PRODH-205ENST00000420436 2034 ntAPPRIS ALT2 TSL 2 BASIC18.91■□□□□ 0.62
PHACTR1Q9C0D0 KLHL33-202ENST00000636854 2394 ntAPPRIS P1 TSL 5 BASIC18.91■□□□□ 0.62
PHACTR1Q9C0D0 MROH1-202ENST00000423230 1712 ntTSL 1 (best) BASIC18.91■□□□□ 0.62
PHACTR1Q9C0D0 SMPD3-211ENST00000568373 2073 ntTSL 1 (best) BASIC18.91■□□□□ 0.62
PHACTR1Q9C0D0 MSANTD1-201ENST00000438480 2922 ntAPPRIS P3 TSL 5 BASIC18.9■□□□□ 0.62
PHACTR1Q9C0D0 HSPB6-201ENST00000004982 1457 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
PHACTR1Q9C0D0 SPPL2C-201ENST00000329196 2238 ntAPPRIS P1 BASIC18.9■□□□□ 0.62
PHACTR1Q9C0D0 KCNH2-203ENST00000430723 2648 ntTSL 5 BASIC18.9■□□□□ 0.62
PHACTR1Q9C0D0 NFKB2-201ENST00000189444 3011 ntAPPRIS ALT1 TSL 1 (best) BASIC18.9■□□□□ 0.62
PHACTR1Q9C0D0 FLJ13224-201ENST00000313737 1514 ntBASIC18.9■□□□□ 0.62
PHACTR1Q9C0D0 PNLDC1-207ENST00000610273 1940 ntTSL 1 (best) BASIC18.9■□□□□ 0.62
PHACTR1Q9C0D0 PIGV-201ENST00000078527 2367 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
PHACTR1Q9C0D0 MST1R-214ENST00000613534 2025 ntTSL 1 (best) BASIC18.9■□□□□ 0.62
PHACTR1Q9C0D0 MINOS1-NBL1-204ENST00000602662 1623 ntAPPRIS P1 TSL 2 BASIC18.9■□□□□ 0.62
PHACTR1Q9C0D0 CIZ1-226ENST00000629610 2855 ntAPPRIS ALT2 TSL 2 BASIC18.9■□□□□ 0.62
PHACTR1Q9C0D0 THAP12-201ENST00000260045 3300 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
PHACTR1Q9C0D0 BEGAIN-211ENST00000637646 2911 ntTSL 5 BASIC18.9■□□□□ 0.62
PHACTR1Q9C0D0 AP000593.1-201ENST00000393668 712 ntBASIC18.9■□□□□ 0.62
PHACTR1Q9C0D0 KRASP1-201ENST00000407852 552 ntBASIC18.9■□□□□ 0.62
PHACTR1Q9C0D0 CT47A12-201ENST00000419982 1165 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
PHACTR1Q9C0D0 AC091390.4-202ENST00000476426 537 ntBASIC18.9■□□□□ 0.62
PHACTR1Q9C0D0 HLX-AS1-201ENST00000552026 563 ntTSL 4 BASIC18.9■□□□□ 0.62
PHACTR1Q9C0D0 PHC1-212ENST00000543824 4292 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
PHACTR1Q9C0D0 DDX17-211ENST00000640332 2190 ntAPPRIS P3 TSL 1 (best) BASIC18.9■□□□□ 0.62
PHACTR1Q9C0D0 DDX17-212ENST00000640668 2196 ntAPPRIS ALT2 TSL 1 (best) BASIC18.9■□□□□ 0.62
PHACTR1Q9C0D0 AC083805.3-201ENST00000619560 1315 ntTSL 3 BASIC18.9■□□□□ 0.62
PHACTR1Q9C0D0 SLC22A4-201ENST00000200652 2201 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
PHACTR1Q9C0D0 GALNT2-201ENST00000366672 4454 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
PHACTR1Q9C0D0 SCARB1-203ENST00000415380 2731 ntTSL 2 BASIC18.9■□□□□ 0.62
PHACTR1Q9C0D0 GPR42-201ENST00000454971 1804 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
PHACTR1Q9C0D0 IRAK3-202ENST00000457197 1853 ntTSL 2 BASIC18.9■□□□□ 0.62
PHACTR1Q9C0D0 CACNA2D1-203ENST00000423588 1429 ntTSL 1 (best) BASIC18.9■□□□□ 0.62
PHACTR1Q9C0D0 NOMO2-201ENST00000330537 4352 ntAPPRIS ALT2 TSL 5 BASIC18.9■□□□□ 0.62
PHACTR1Q9C0D0 STEAP1B-201ENST00000404369 1515 ntAPPRIS ALT2 TSL 1 (best) BASIC18.9■□□□□ 0.62
PHACTR1Q9C0D0 VPS26B-202ENST00000525095 1558 ntAPPRIS P1 TSL 5 BASIC18.89■□□□□ 0.62
PHACTR1Q9C0D0 KCNIP4-206ENST00000447367 1641 ntTSL 5 BASIC18.89■□□□□ 0.62
PHACTR1Q9C0D0 GPRIN2-201ENST00000374314 1696 ntAPPRIS P1 BASIC18.89■□□□□ 0.61
PHACTR1Q9C0D0 ACBD4-215ENST00000592162 1684 ntTSL 5 BASIC18.89■□□□□ 0.61
PHACTR1Q9C0D0 MAPK8IP3-202ENST00000356010 4456 ntTSL 5 BASIC18.89■□□□□ 0.61
PHACTR1Q9C0D0 LINC00574-201ENST00000420557 2318 ntTSL 2 BASIC18.89■□□□□ 0.61
PHACTR1Q9C0D0 TMEM104-202ENST00000417024 1781 ntTSL 2 BASIC18.89■□□□□ 0.61
PHACTR1Q9C0D0 TACSTD2-201ENST00000371225 2351 ntAPPRIS P1 BASIC18.89■□□□□ 0.61
PHACTR1Q9C0D0 VPS37B-201ENST00000267202 3028 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
PHACTR1Q9C0D0 AL355987.1-201ENST00000435202 2420 ntAPPRIS P1 TSL 2 BASIC18.89■□□□□ 0.61
PHACTR1Q9C0D0 MYH7B-201ENST00000262873 6293 ntAPPRIS P2 TSL 1 (best) BASIC18.89■□□□□ 0.61
PHACTR1Q9C0D0 AC004951.3-201ENST00000418645 1148 ntBASIC18.89■□□□□ 0.61
Retrieved 100 of 98,524 protein–RNA pairs in 27.3 ms