Protein–RNA interactions for Protein: Q9BT78

COPS4, COP9 signalosome complex subunit 4, humanhuman

Predictions only

Length 406 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COPS4Q9BT78 BFSP1-201ENST00000377868 2063 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
COPS4Q9BT78 NINL-201ENST00000278886 4969 ntAPPRIS P3 TSL 1 (best) BASIC17.11■□□□□ 0.33
COPS4Q9BT78 TNFAIP1-202ENST00000544907 1656 ntTSL 2 BASIC17.11■□□□□ 0.33
COPS4Q9BT78 HMGXB3-206ENST00000613459 5567 ntAPPRIS ALT2 TSL 5 BASIC17.11■□□□□ 0.33
COPS4Q9BT78 SLC22A4-201ENST00000200652 2201 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
COPS4Q9BT78 RPS6KA5-201ENST00000418736 2249 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
COPS4Q9BT78 POC1B-GALNT4-201ENST00000547474 2207 ntTSL 2 BASIC17.11■□□□□ 0.33
COPS4Q9BT78 RAB40C-203ENST00000535977 2717 ntAPPRIS P1 TSL 5 BASIC17.11■□□□□ 0.33
COPS4Q9BT78 RPS14-201ENST00000312037 711 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
COPS4Q9BT78 NPY-202ENST00000405982 565 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
COPS4Q9BT78 ABHD17AP6-201ENST00000458502 1044 ntBASIC17.11■□□□□ 0.33
COPS4Q9BT78 ABCC3-217ENST00000515707 656 ntTSL 3 BASIC17.11■□□□□ 0.33
COPS4Q9BT78 PNMA6B-201ENST00000538162 1200 ntBASIC17.11■□□□□ 0.33
COPS4Q9BT78 AC060766.5-201ENST00000590539 871 ntBASIC17.11■□□□□ 0.33
COPS4Q9BT78 PRSS36-201ENST00000268281 2840 ntAPPRIS P3 TSL 1 (best) BASIC17.11■□□□□ 0.33
COPS4Q9BT78 KCNA2-201ENST00000316361 2827 ntAPPRIS P1 TSL 2 BASIC17.11■□□□□ 0.33
COPS4Q9BT78 SLC1A7-201ENST00000371491 1306 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
COPS4Q9BT78 TRMU-202ENST00000381019 1381 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
COPS4Q9BT78 BAZ1A-203ENST00000382422 5775 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
COPS4Q9BT78 CCAR2-214ENST00000613179 1421 ntTSL 5 BASIC17.11■□□□□ 0.33
COPS4Q9BT78 C14orf180-202ENST00000410013 2009 ntAPPRIS P3 TSL 1 (best) BASIC17.11■□□□□ 0.33
COPS4Q9BT78 MLXIP-201ENST00000319080 8427 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
COPS4Q9BT78 R3HCC1-210ENST00000625275 1489 ntAPPRIS ALT2 TSL 1 (best) BASIC17.11■□□□□ 0.33
COPS4Q9BT78 MAEA-201ENST00000264750 2058 ntTSL 2 BASIC17.11■□□□□ 0.33
COPS4Q9BT78 TRIM41-202ENST00000351937 2696 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
COPS4Q9BT78 PLCB3-204ENST00000540288 4469 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
COPS4Q9BT78 CPZ-201ENST00000315782 2136 ntAPPRIS P3 TSL 1 (best) BASIC17.11■□□□□ 0.33
COPS4Q9BT78 INPP4A-205ENST00000409851 3365 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
COPS4Q9BT78 AHSA2-202ENST00000394457 6574 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
COPS4Q9BT78 FZR1-203ENST00000441788 5212 ntAPPRIS P3 TSL 1 (best) BASIC17.1■□□□□ 0.33
COPS4Q9BT78 STX5-202ENST00000377897 1785 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
COPS4Q9BT78 KCNIP4-205ENST00000382152 1767 ntTSL 5 BASIC17.1■□□□□ 0.33
COPS4Q9BT78 SCARB2-223ENST00000640640 4608 ntTSL 5 BASIC17.1■□□□□ 0.33
COPS4Q9BT78 STRN4-201ENST00000263280 3210 ntAPPRIS P3 TSL 1 (best) BASIC17.1■□□□□ 0.33
COPS4Q9BT78 EXOSC3-201ENST00000327304 1806 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
COPS4Q9BT78 AC142086.1-202ENST00000398669 1839 ntTSL 2 BASIC17.1■□□□□ 0.33
COPS4Q9BT78 ARAP1-AS2-201ENST00000500163 1824 ntTSL 2 BASIC17.1■□□□□ 0.33
COPS4Q9BT78 ITSN2-201ENST00000355123 6300 ntAPPRIS P4 TSL 1 (best) BASIC17.1■□□□□ 0.33
COPS4Q9BT78 PRR23B-201ENST00000329447 1896 ntAPPRIS P1 BASIC17.1■□□□□ 0.33
COPS4Q9BT78 THEG-201ENST00000342640 1877 ntAPPRIS P4 TSL 1 (best) BASIC17.1■□□□□ 0.33
COPS4Q9BT78 DVL2-209ENST00000575458 2659 ntAPPRIS ALT2 TSL 2 BASIC17.1■□□□□ 0.33
COPS4Q9BT78 SBF2-AS1-201ENST00000498905 2709 ntTSL 5 BASIC17.1■□□□□ 0.33
COPS4Q9BT78 SBK2-201ENST00000344158 1056 ntAPPRIS P1 TSL 2 BASIC17.1■□□□□ 0.33
COPS4Q9BT78 SULT1A1-202ENST00000350842 1282 ntTSL 3 BASIC17.1■□□□□ 0.33
COPS4Q9BT78 CABP2-202ENST00000353903 789 ntAPPRIS P1 TSL 5 BASIC17.1■□□□□ 0.33
COPS4Q9BT78 ANKRD39-201ENST00000393537 976 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
COPS4Q9BT78 RAMP1-202ENST00000403885 650 ntTSL 3 BASIC17.1■□□□□ 0.33
COPS4Q9BT78 SBK2-202ENST00000413299 1085 ntAPPRIS P1 TSL 5 BASIC17.1■□□□□ 0.33
COPS4Q9BT78 AC007285.1-201ENST00000422239 893 ntTSL 5 BASIC17.1■□□□□ 0.33
COPS4Q9BT78 AKAIN1-201ENST00000434239 575 ntAPPRIS P1 TSL 2 BASIC17.1■□□□□ 0.33
COPS4Q9BT78 AL807752.2-201ENST00000435463 301 ntTSL 3 BASIC17.1■□□□□ 0.33
COPS4Q9BT78 AC004889.1-203ENST00000464929 819 ntTSL 5 BASIC17.1■□□□□ 0.33
COPS4Q9BT78 OR2A1-AS1-207ENST00000486094 819 ntBASIC17.1■□□□□ 0.33
COPS4Q9BT78 PAQR4-205ENST00000576565 842 ntTSL 2 BASIC17.1■□□□□ 0.33
COPS4Q9BT78 DCAKD-205ENST00000588499 990 ntAPPRIS P1 TSL 2 BASIC17.1■□□□□ 0.33
COPS4Q9BT78 FAM135A-209ENST00000505769 4806 ntTSL 5 BASIC17.1■□□□□ 0.33
COPS4Q9BT78 RGL3-202ENST00000393423 2278 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
COPS4Q9BT78 BNIP2-213ENST00000612191 2515 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
COPS4Q9BT78 KLHL22-201ENST00000328879 2616 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
COPS4Q9BT78 SKOR1-202ENST00000380035 3675 ntAPPRIS ALT2 TSL 5 BASIC17.1■□□□□ 0.33
COPS4Q9BT78 LMF1-212ENST00000568897 1603 ntTSL 5 BASIC17.1■□□□□ 0.33
COPS4Q9BT78 GOLGA6L3-201ENST00000507199 1679 ntBASIC17.1■□□□□ 0.33
COPS4Q9BT78 RASSF1-201ENST00000327761 1757 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
COPS4Q9BT78 SSC5D-202ENST00000587166 3017 ntAPPRIS ALT2 TSL 1 (best) BASIC17.1■□□□□ 0.33
COPS4Q9BT78 WBP2-219ENST00000626827 1867 ntTSL 5 BASIC17.1■□□□□ 0.33
COPS4Q9BT78 OLA1-201ENST00000284719 4417 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
COPS4Q9BT78 SLC27A5-207ENST00000601355 1987 ntAPPRIS ALT2 TSL 2 BASIC17.09■□□□□ 0.33
COPS4Q9BT78 SNAI3-AS1-205ENST00000568633 2096 ntBASIC17.09■□□□□ 0.33
COPS4Q9BT78 FBXL22-202ENST00000534939 2443 ntAPPRIS ALT2 TSL 3 BASIC17.09■□□□□ 0.33
COPS4Q9BT78 NUDT19-201ENST00000397061 2967 ntAPPRIS P1 TSL 2 BASIC17.09■□□□□ 0.33
COPS4Q9BT78 ADNP2-201ENST00000262198 5393 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
COPS4Q9BT78 GLI4-202ENST00000344692 1012 ntTSL 2 BASIC17.09■□□□□ 0.33
COPS4Q9BT78 NOXO1-203ENST00000397280 1147 ntAPPRIS ALT2 TSL 1 (best) BASIC17.09■□□□□ 0.33
COPS4Q9BT78 EIF4E3-203ENST00000421769 777 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
COPS4Q9BT78 TP53I11-215ENST00000531928 1078 ntTSL 3 BASIC17.09■□□□□ 0.33
COPS4Q9BT78 AL929601.1-201ENST00000551565 573 ntTSL 4 BASIC17.09■□□□□ 0.33
COPS4Q9BT78 MAX-217ENST00000557277 728 ntTSL 3 BASIC17.09■□□□□ 0.33
COPS4Q9BT78 AC007216.1-201ENST00000570197 601 ntTSL 4 BASIC17.09■□□□□ 0.33
COPS4Q9BT78 AC083880.1-201ENST00000608266 535 ntBASIC17.09■□□□□ 0.33
COPS4Q9BT78 AC133041.1-202ENST00000642053 222 ntBASIC17.09■□□□□ 0.33
COPS4Q9BT78 DYNLL1-209ENST00000550845 1376 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
COPS4Q9BT78 TSPAN4-204ENST00000397404 1462 ntAPPRIS P1 TSL 5 BASIC17.09■□□□□ 0.33
COPS4Q9BT78 SLC25A15-201ENST00000338625 1586 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
COPS4Q9BT78 KCNT1-202ENST00000371757 4717 ntAPPRIS P3 TSL 1 (best) BASIC17.09■□□□□ 0.33
COPS4Q9BT78 PCBP4-210ENST00000471622 1784 ntTSL 5 BASIC17.09■□□□□ 0.33
COPS4Q9BT78 POLR1D-220ENST00000637071 1943 ntTSL 5 BASIC17.09■□□□□ 0.33
COPS4Q9BT78 WDR25-202ENST00000402312 1969 ntAPPRIS P1 TSL 2 BASIC17.09■□□□□ 0.33
COPS4Q9BT78 PHKA1-201ENST00000339490 6121 ntAPPRIS ALT1 TSL 1 (best) BASIC17.09■□□□□ 0.33
COPS4Q9BT78 WSCD1-209ENST00000574232 2129 ntAPPRIS P1 TSL 5 BASIC17.09■□□□□ 0.33
COPS4Q9BT78 TSPAN3-201ENST00000267970 6467 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
COPS4Q9BT78 MCM9-201ENST00000316068 2442 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
COPS4Q9BT78 STAMBPL1-203ENST00000371926 2532 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
COPS4Q9BT78 DENND5B-201ENST00000354285 3132 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
COPS4Q9BT78 PARP12-201ENST00000263549 3796 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
COPS4Q9BT78 MAGI1-213ENST00000483466 4791 ntAPPRIS P3 TSL 1 (best) BASIC17.09■□□□□ 0.33
COPS4Q9BT78 PROSER1-201ENST00000352251 5168 ntAPPRIS P2 TSL 1 (best) BASIC17.08■□□□□ 0.33
COPS4Q9BT78 KCNQ2-207ENST00000370224 3004 ntTSL 5 BASIC17.08■□□□□ 0.33
COPS4Q9BT78 STRA6-209ENST00000563965 2565 ntTSL 1 (best) BASIC17.08■□□□□ 0.33
COPS4Q9BT78 AC009053.2-201ENST00000563701 2365 ntBASIC17.08■□□□□ 0.33
COPS4Q9BT78 NEXN-AS1-201ENST00000421331 2292 ntTSL 2 BASIC17.08■□□□□ 0.33
Retrieved 100 of 98,524 protein–RNA pairs in 20.4 ms