Protein–RNA interactions for Protein: Q96RK4

BBS4, Bardet-Biedl syndrome 4 protein, humanhuman

Predictions only

Length 519 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
BBS4Q96RK4 DAB1-202ENST00000371230 1150 ntTSL 5 BASIC17.69■□□□□ 0.42
BBS4Q96RK4 UBB-203ENST00000395839 1012 ntAPPRIS P1 TSL 2 BASIC17.69■□□□□ 0.42
BBS4Q96RK4 FDX2-206ENST00000492239 773 ntTSL 2 BASIC17.69■□□□□ 0.42
BBS4Q96RK4 TMEM263-208ENST00000551489 621 ntTSL 4 BASIC17.69■□□□□ 0.42
BBS4Q96RK4 GCHFR-205ENST00000559932 695 ntTSL 2 BASIC17.69■□□□□ 0.42
BBS4Q96RK4 ITGA4-202ENST00000339307 1403 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
BBS4Q96RK4 ARHGAP22-203ENST00000374172 2380 ntTSL 2 BASIC17.69■□□□□ 0.42
BBS4Q96RK4 IFNL4-203ENST00000634680 1421 ntAPPRIS ALT2 TSL 1 (best) BASIC17.69■□□□□ 0.42
BBS4Q96RK4 MCU-202ENST00000373053 2949 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
BBS4Q96RK4 TNFAIP2-201ENST00000333007 4175 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
BBS4Q96RK4 RGS3-231ENST00000613049 1726 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
BBS4Q96RK4 ARRB1-201ENST00000360025 1895 ntAPPRIS P3 TSL 1 (best) BASIC17.69■□□□□ 0.42
BBS4Q96RK4 CASP16P-202ENST00000575497 2161 ntTSL 2 BASIC17.69■□□□□ 0.42
BBS4Q96RK4 LRP4-201ENST00000378623 8076 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
BBS4Q96RK4 IFNLR1-202ENST00000327575 1476 ntAPPRIS ALT2 TSL 1 (best) BASIC17.69■□□□□ 0.42
BBS4Q96RK4 HAUS4-218ENST00000555986 1626 ntTSL 5 BASIC17.69■□□□□ 0.42
BBS4Q96RK4 BLOC1S3-201ENST00000433642 2601 ntAPPRIS P1 TSL 2 BASIC17.68■□□□□ 0.42
BBS4Q96RK4 TMEM110-201ENST00000355083 4769 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
BBS4Q96RK4 PAQR6-201ENST00000292291 1908 ntAPPRIS P3 TSL 1 (best) BASIC17.68■□□□□ 0.42
BBS4Q96RK4 IL17RC-215ENST00000455057 2244 ntAPPRIS ALT2 TSL 1 (best) BASIC17.68■□□□□ 0.42
BBS4Q96RK4 FBXW11-202ENST00000296933 4539 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
BBS4Q96RK4 KRT15-203ENST00000393976 2394 ntAPPRIS P1 TSL 5 BASIC17.68■□□□□ 0.42
BBS4Q96RK4 APIP-201ENST00000395787 1366 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
BBS4Q96RK4 REPS2-201ENST00000303843 7771 ntAPPRIS ALT2 TSL 1 (best) BASIC17.68■□□□□ 0.42
BBS4Q96RK4 BRI3BP-201ENST00000341446 6648 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
BBS4Q96RK4 NFYC-AS1-201ENST00000606277 1687 ntBASIC17.68■□□□□ 0.42
BBS4Q96RK4 AC087457.1-201ENST00000503496 2727 ntTSL 2 BASIC17.68■□□□□ 0.42
BBS4Q96RK4 STRN4-202ENST00000391910 3628 ntAPPRIS ALT1 TSL 5 BASIC17.68■□□□□ 0.42
BBS4Q96RK4 PIGH-201ENST00000216452 1420 ntAPPRIS P2 TSL 1 (best) BASIC17.68■□□□□ 0.42
BBS4Q96RK4 METTL27-201ENST00000297873 941 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
BBS4Q96RK4 PMVK-201ENST00000368467 1280 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
BBS4Q96RK4 USF2-203ENST00000379134 648 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
BBS4Q96RK4 TMSB4X-201ENST00000380633 495 ntAPPRIS P1 TSL 3 BASIC17.68■□□□□ 0.42
BBS4Q96RK4 SLC22A17-204ENST00000397267 2455 ntAPPRIS P4 TSL 5 BASIC17.68■□□□□ 0.42
BBS4Q96RK4 GPM6B-204ENST00000398361 1033 ntTSL 2 BASIC17.68■□□□□ 0.42
BBS4Q96RK4 CCDC74B-203ENST00000409128 789 ntAPPRIS ALT2 TSL 2 BASIC17.68■□□□□ 0.42
BBS4Q96RK4 AL162231.1-203ENST00000416454 465 ntAPPRIS ALT2 TSL 2 BASIC17.68■□□□□ 0.42
BBS4Q96RK4 PEX26-203ENST00000428061 815 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
BBS4Q96RK4 TSPY7P-201ENST00000431358 1114 ntBASIC17.68■□□□□ 0.42
BBS4Q96RK4 TSPY1-202ENST00000451548 1160 ntAPPRIS P5 TSL 1 (best) BASIC17.68■□□□□ 0.42
BBS4Q96RK4 AC004080.6-201ENST00000467897 919 ntTSL 5 BASIC17.68■□□□□ 0.42
BBS4Q96RK4 AC096719.1-201ENST00000510705 1874 ntTSL 5 BASIC17.68■□□□□ 0.42
BBS4Q96RK4 AC044860.1-201ENST00000560756 1160 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
BBS4Q96RK4 MIR4785-201ENST00000585005 73 ntBASIC17.68■□□□□ 0.42
BBS4Q96RK4 UBL5-202ENST00000586895 432 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
BBS4Q96RK4 TSTD3-202ENST00000636394 336 ntAPPRIS ALT2 TSL 3 BASIC17.68■□□□□ 0.42
BBS4Q96RK4 ARHGEF28-212ENST00000513042 6273 ntAPPRIS ALT2 TSL 5 BASIC17.68■□□□□ 0.42
BBS4Q96RK4 EFS-201ENST00000216733 3118 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
BBS4Q96RK4 STXBP2-203ENST00000441779 1914 ntTSL 2 BASIC17.68■□□□□ 0.42
BBS4Q96RK4 CAMK4-210ENST00000512453 1640 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
BBS4Q96RK4 OGFOD2-222ENST00000545317 1481 ntTSL 2 BASIC17.68■□□□□ 0.42
BBS4Q96RK4 TMEM109-201ENST00000227525 2413 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
BBS4Q96RK4 RABL2B-205ENST00000395595 2428 ntAPPRIS ALT2 TSL 1 (best) BASIC17.68■□□□□ 0.42
BBS4Q96RK4 RTEL1-204ENST00000370003 2273 ntTSL 2 BASIC17.68■□□□□ 0.42
BBS4Q96RK4 IFRD2-202ENST00000417626 2109 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
BBS4Q96RK4 MTMR9LP-203ENST00000426597 1545 ntBASIC17.67■□□□□ 0.42
BBS4Q96RK4 LARGE2-202ENST00000401752 2516 ntAPPRIS P3 TSL 1 (best) BASIC17.67■□□□□ 0.42
BBS4Q96RK4 AGTR1-201ENST00000349243 2356 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
BBS4Q96RK4 MRPL3-201ENST00000264995 1706 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
BBS4Q96RK4 ATP6V1G2-205ENST00000303892 1588 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
BBS4Q96RK4 FBXL18-205ENST00000620087 2076 ntTSL 5 BASIC17.67■□□□□ 0.42
BBS4Q96RK4 KCNA3-201ENST00000369769 2569 ntAPPRIS P1 BASIC17.67■□□□□ 0.42
BBS4Q96RK4 CYP2D6-201ENST00000359033 1433 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
BBS4Q96RK4 TTLL10-203ENST00000379290 2283 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
BBS4Q96RK4 CCNA1-202ENST00000440264 1758 ntAPPRIS P1 TSL 2 BASIC17.67■□□□□ 0.42
BBS4Q96RK4 AK2-201ENST00000354858 1021 ntAPPRIS P4 TSL 1 (best) BASIC17.67■□□□□ 0.42
BBS4Q96RK4 HIST1H2AM-201ENST00000359611 393 ntAPPRIS P1 BASIC17.67■□□□□ 0.42
BBS4Q96RK4 TRPT1-203ENST00000394547 865 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
BBS4Q96RK4 RHOG-202ENST00000396978 1066 ntAPPRIS P1 TSL 3 BASIC17.67■□□□□ 0.42
BBS4Q96RK4 UBE2I-203ENST00000397514 2976 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
BBS4Q96RK4 LINC00620-201ENST00000419618 996 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
BBS4Q96RK4 KHDRBS1-204ENST00000492989 1215 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
BBS4Q96RK4 PACRGL-207ENST00000502938 810 ntTSL 4 BASIC17.67■□□□□ 0.42
BBS4Q96RK4 DHDH-203ENST00000522614 776 ntTSL 5 BASIC17.67■□□□□ 0.42
BBS4Q96RK4 AKIP1-206ENST00000525005 1128 ntTSL 2 BASIC17.67■□□□□ 0.42
BBS4Q96RK4 TGIF1-219ENST00000551541 990 ntTSL 2 BASIC17.67■□□□□ 0.42
BBS4Q96RK4 AC100839.1-201ENST00000559589 577 ntTSL 4 BASIC17.67■□□□□ 0.42
BBS4Q96RK4 AC016737.2-201ENST00000609273 358 ntTSL 3 BASIC17.67■□□□□ 0.42
BBS4Q96RK4 PTN-201ENST00000348225 1614 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
BBS4Q96RK4 CPSF3-201ENST00000238112 2345 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
BBS4Q96RK4 KCNH1-210ENST00000640044 1818 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
BBS4Q96RK4 SPIRE2-201ENST00000378247 3235 ntAPPRIS P2 TSL 1 (best) BASIC17.67■□□□□ 0.42
BBS4Q96RK4 SNAP47-201ENST00000315781 2367 ntAPPRIS P3 TSL 1 (best) BASIC17.67■□□□□ 0.42
BBS4Q96RK4 ANKRD17-211ENST00000639793 3486 ntTSL 5 BASIC17.67■□□□□ 0.42
BBS4Q96RK4 PSTPIP1-203ENST00000558012 1896 ntAPPRIS P2 TSL 1 (best) BASIC17.67■□□□□ 0.42
BBS4Q96RK4 EIF4E3-201ENST00000295612 2764 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
BBS4Q96RK4 NUP153-202ENST00000537253 6030 ntAPPRIS ALT2 TSL 2 BASIC17.67■□□□□ 0.42
BBS4Q96RK4 LRRC20-205ENST00000395010 2959 ntTSL 3 BASIC17.67■□□□□ 0.42
BBS4Q96RK4 FARSA-202ENST00000423140 1720 ntTSL 2 BASIC17.67■□□□□ 0.42
BBS4Q96RK4 IFRD2-204ENST00000436390 2275 ntAPPRIS P1 TSL 2 BASIC17.67■□□□□ 0.42
BBS4Q96RK4 HMGXB3-206ENST00000613459 5567 ntAPPRIS ALT2 TSL 5 BASIC17.66■□□□□ 0.42
BBS4Q96RK4 ZNF420-201ENST00000304239 1945 ntTSL 2 BASIC17.66■□□□□ 0.42
BBS4Q96RK4 CDK11A-205ENST00000378633 2458 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
BBS4Q96RK4 GJB6-204ENST00000400066 1927 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
BBS4Q96RK4 NR1H2-210ENST00000598168 1915 ntAPPRIS ALT2 TSL 5 BASIC17.66■□□□□ 0.42
BBS4Q96RK4 NUDT16-201ENST00000502852 1552 ntTSL 2 BASIC17.66■□□□□ 0.42
BBS4Q96RK4 DOC2B-203ENST00000613549 6048 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
BBS4Q96RK4 COBL-202ENST00000395540 2332 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
BBS4Q96RK4 RHOU-201ENST00000366691 4372 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
BBS4Q96RK4 MPZ-206ENST00000533357 1955 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
Retrieved 100 of 98,524 protein–RNA pairs in 34.2 ms