Protein–RNA interactions for Protein: Q96PC3

AP1S3, AP-1 complex subunit sigma-3, humanhuman

Predictions only

Length 154 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
AP1S3Q96PC3 ANKRD2-201ENST00000298808 1350 ntTSL 1 (best) BASIC14.09□□□□□ -0.15
AP1S3Q96PC3 ARFRP1-213ENST00000619493 2456 ntAPPRIS P1 TSL 3 BASIC14.09□□□□□ -0.15
AP1S3Q96PC3 BOD1L2-201ENST00000585477 3239 ntAPPRIS P1 BASIC14.09□□□□□ -0.15
AP1S3Q96PC3 FAM222A-201ENST00000358906 2731 ntAPPRIS P1 TSL 5 BASIC14.09□□□□□ -0.15
AP1S3Q96PC3 LDLRAP1-201ENST00000374338 2940 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
AP1S3Q96PC3 FN3K-201ENST00000300784 1434 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
AP1S3Q96PC3 SPESP1-201ENST00000310673 1431 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
AP1S3Q96PC3 PDLIM2-204ENST00000397760 1847 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
AP1S3Q96PC3 TMEM91-209ENST00000539627 1843 ntTSL 1 (best) BASIC14.09□□□□□ -0.15
AP1S3Q96PC3 MELTF-201ENST00000296350 3963 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
AP1S3Q96PC3 LIN7B-201ENST00000221459 755 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
AP1S3Q96PC3 NDUFB2-201ENST00000247866 504 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
AP1S3Q96PC3 PYY-201ENST00000360085 1053 ntAPPRIS P2 TSL 1 (best) BASIC14.09□□□□□ -0.15
AP1S3Q96PC3 GDNF-203ENST00000381826 778 ntTSL 1 (best) BASIC14.09□□□□□ -0.15
AP1S3Q96PC3 GDNF-204ENST00000427982 856 ntTSL 1 (best) BASIC14.09□□□□□ -0.15
AP1S3Q96PC3 RASGEF1B-208ENST00000510780 539 ntTSL 3 BASIC14.09□□□□□ -0.15
AP1S3Q96PC3 RASGEF1B-209ENST00000512343 498 ntTSL 3 BASIC14.09□□□□□ -0.15
AP1S3Q96PC3 SPI1-203ENST00000533030 661 ntTSL 2 BASIC14.09□□□□□ -0.15
AP1S3Q96PC3 PLLP-204ENST00000569059 665 ntTSL 3 BASIC14.09□□□□□ -0.15
AP1S3Q96PC3 HERC2P5-204ENST00000569697 1214 ntTSL 2 BASIC14.09□□□□□ -0.15
AP1S3Q96PC3 AC018553.1-201ENST00000616682 1458 ntBASIC14.09□□□□□ -0.15
AP1S3Q96PC3 CHAC1-205ENST00000617961 1498 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
AP1S3Q96PC3 NR4A2-204ENST00000409572 2878 ntAPPRIS P1 TSL 5 BASIC14.09□□□□□ -0.15
AP1S3Q96PC3 LONP1-215ENST00000593119 2918 ntTSL 2 BASIC14.09□□□□□ -0.15
AP1S3Q96PC3 C19orf54-203ENST00000470681 2521 ntTSL 2 BASIC14.09□□□□□ -0.15
AP1S3Q96PC3 MARC2-202ENST00000366913 2134 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
AP1S3Q96PC3 YPEL5-205ENST00000402708 1735 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
AP1S3Q96PC3 ACTL6B-201ENST00000160382 1537 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
AP1S3Q96PC3 ZNF276-201ENST00000289816 4589 ntTSL 1 (best) BASIC14.09□□□□□ -0.15
AP1S3Q96PC3 KCNQ2-207ENST00000370224 3004 ntTSL 5 BASIC14.09□□□□□ -0.15
AP1S3Q96PC3 LONRF1-208ENST00000533751 3043 ntTSL 5 BASIC14.09□□□□□ -0.15
AP1S3Q96PC3 EGFR-204ENST00000420316 1570 ntTSL 1 (best) BASIC14.09□□□□□ -0.15
AP1S3Q96PC3 RRNAD1-202ENST00000368218 1802 ntAPPRIS ALT2 TSL 3 BASIC14.08□□□□□ -0.15
AP1S3Q96PC3 SPRYD7-204ENST00000613924 2285 ntTSL 1 (best) BASIC14.08□□□□□ -0.15
AP1S3Q96PC3 AGAP4-201ENST00000311652 2715 ntAPPRIS ALT2 TSL 1 (best) BASIC14.08□□□□□ -0.15
AP1S3Q96PC3 TBL2-201ENST00000305632 3161 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.15
AP1S3Q96PC3 C19orf67-203ENST00000548523 1427 ntAPPRIS P2 TSL 5 BASIC14.08□□□□□ -0.15
AP1S3Q96PC3 RNF112-201ENST00000461366 3212 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
AP1S3Q96PC3 TEX21P-204ENST00000641479 1693 ntBASIC14.08□□□□□ -0.16
AP1S3Q96PC3 SNAP47-201ENST00000315781 2367 ntAPPRIS P3 TSL 1 (best) BASIC14.08□□□□□ -0.16
AP1S3Q96PC3 YTHDF3-212ENST00000621413 2370 ntTSL 5 BASIC14.08□□□□□ -0.16
AP1S3Q96PC3 PFDN6-206ENST00000463584 1915 ntTSL 3 BASIC14.08□□□□□ -0.16
AP1S3Q96PC3 C11orf80-214ENST00000532565 1948 ntAPPRIS ALT2 TSL 5 BASIC14.08□□□□□ -0.16
AP1S3Q96PC3 VSTM2B-201ENST00000335523 1488 ntAPPRIS P1 TSL 5 BASIC14.08□□□□□ -0.16
AP1S3Q96PC3 P3H4-202ENST00000393928 2601 ntAPPRIS P2 TSL 1 (best) BASIC14.08□□□□□ -0.16
AP1S3Q96PC3 RASSF8-AS1-202ENST00000500276 2610 ntTSL 2 BASIC14.08□□□□□ -0.16
AP1S3Q96PC3 UNC50-201ENST00000357765 1143 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
AP1S3Q96PC3 CCDC160-201ENST00000370809 1299 ntAPPRIS P1 TSL 5 BASIC14.08□□□□□ -0.16
AP1S3Q96PC3 ASIP-201ENST00000374954 586 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
AP1S3Q96PC3 CD99P1-203ENST00000431582 602 ntTSL 4 BASIC14.08□□□□□ -0.16
AP1S3Q96PC3 WWTR1-AS1-203ENST00000495094 975 ntTSL 1 (best) BASIC14.08□□□□□ -0.16
AP1S3Q96PC3 EDA-209ENST00000525810 843 ntTSL 1 (best) BASIC14.08□□□□□ -0.16
AP1S3Q96PC3 EDA-210ENST00000527388 927 ntTSL 1 (best) BASIC14.08□□□□□ -0.16
AP1S3Q96PC3 C2orf69P4-201ENST00000565394 541 ntBASIC14.08□□□□□ -0.16
AP1S3Q96PC3 AP001005.4-202ENST00000575325 560 ntTSL 4 BASIC14.08□□□□□ -0.16
AP1S3Q96PC3 TMEM191A-208ENST00000450925 1961 ntTSL 2 BASIC14.08□□□□□ -0.16
AP1S3Q96PC3 SMARCC2-201ENST00000267064 4076 ntAPPRIS P4 TSL 1 (best) BASIC14.08□□□□□ -0.16
AP1S3Q96PC3 C17orf58-201ENST00000334461 1535 ntTSL 2 BASIC14.08□□□□□ -0.16
AP1S3Q96PC3 SLC16A3-221ENST00000617373 2048 ntAPPRIS P1 TSL 5 BASIC14.08□□□□□ -0.16
AP1S3Q96PC3 SLC16A3-222ENST00000619321 2015 ntAPPRIS P1 TSL 5 BASIC14.08□□□□□ -0.16
AP1S3Q96PC3 CT47B1-201ENST00000371311 1328 ntAPPRIS P1 TSL 5 BASIC14.08□□□□□ -0.16
AP1S3Q96PC3 TOM1L2-210ENST00000542206 1320 ntTSL 2 BASIC14.08□□□□□ -0.16
AP1S3Q96PC3 C6orf223-202ENST00000439969 2757 ntTSL 2 BASIC14.08□□□□□ -0.16
AP1S3Q96PC3 AC116351.2-201ENST00000606540 1585 ntBASIC14.08□□□□□ -0.16
AP1S3Q96PC3 PGAM1-201ENST00000334828 1830 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
AP1S3Q96PC3 SLC5A10-203ENST00000395645 2069 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
AP1S3Q96PC3 ACTR8-202ENST00000482349 2091 ntTSL 2 BASIC14.08□□□□□ -0.16
AP1S3Q96PC3 POMT1-208ENST00000423007 3320 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
AP1S3Q96PC3 TNRC18-203ENST00000399537 10572 ntAPPRIS ALT2 TSL 5 BASIC14.08□□□□□ -0.16
AP1S3Q96PC3 TNRC18-205ENST00000430969 10562 ntAPPRIS P2 TSL 5 BASIC14.08□□□□□ -0.16
AP1S3Q96PC3 PTPN18-201ENST00000175756 3669 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
AP1S3Q96PC3 SNAP23-201ENST00000249647 2687 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
AP1S3Q96PC3 PHKA1-202ENST00000373539 4476 ntTSL 5 BASIC14.07□□□□□ -0.16
AP1S3Q96PC3 PAK6-202ENST00000455577 4215 ntTSL 2 BASIC14.07□□□□□ -0.16
AP1S3Q96PC3 GPC1-201ENST00000264039 3713 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
AP1S3Q96PC3 MTX1-201ENST00000316721 1441 ntTSL 1 (best) BASIC14.07□□□□□ -0.16
AP1S3Q96PC3 NFATC4-220ENST00000555393 2235 ntTSL 1 (best) BASIC14.07□□□□□ -0.16
AP1S3Q96PC3 IL10RB-201ENST00000290200 1963 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
AP1S3Q96PC3 HCK-206ENST00000518730 1742 ntAPPRIS ALT2 TSL 1 (best) BASIC14.07□□□□□ -0.16
AP1S3Q96PC3 SOCS2-210ENST00000551556 1716 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
AP1S3Q96PC3 PTPRA-205ENST00000399903 3337 ntTSL 5 BASIC14.07□□□□□ -0.16
AP1S3Q96PC3 AC067930.6-201ENST00000623257 4947 ntBASIC14.07□□□□□ -0.16
AP1S3Q96PC3 PALM3-201ENST00000340790 2262 ntAPPRIS P2 TSL 5 BASIC14.07□□□□□ -0.16
AP1S3Q96PC3 GOLGA4-208ENST00000444882 1451 ntTSL 1 (best) BASIC14.07□□□□□ -0.16
AP1S3Q96PC3 PSPC1-206ENST00000619300 2013 ntAPPRIS P1 TSL 5 BASIC14.07□□□□□ -0.16
AP1S3Q96PC3 PDP1-208ENST00000520728 2554 ntAPPRIS P3 TSL 1 (best) BASIC14.07□□□□□ -0.16
AP1S3Q96PC3 FGFR3-208ENST00000481110 4217 ntTSL 1 (best) BASIC14.07□□□□□ -0.16
AP1S3Q96PC3 ACVR1B-205ENST00000541224 1791 ntTSL 2 BASIC14.07□□□□□ -0.16
AP1S3Q96PC3 CMPK2-201ENST00000256722 2884 ntAPPRIS P3 TSL 1 (best) BASIC14.07□□□□□ -0.16
AP1S3Q96PC3 MFSD11-220ENST00000621483 2850 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
AP1S3Q96PC3 AC006333.2-201ENST00000607957 2099 ntBASIC14.07□□□□□ -0.16
AP1S3Q96PC3 PQLC2-203ENST00000400548 1548 ntTSL 1 (best) BASIC14.07□□□□□ -0.16
AP1S3Q96PC3 PRKAR2A-206ENST00000454963 1849 ntAPPRIS P1 TSL 2 BASIC14.07□□□□□ -0.16
AP1S3Q96PC3 RNPS1-201ENST00000301730 1276 ntAPPRIS P1 TSL 2 BASIC14.07□□□□□ -0.16
AP1S3Q96PC3 MGST3-205ENST00000367889 1015 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
AP1S3Q96PC3 LBX2-202ENST00000377566 1186 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
AP1S3Q96PC3 CALM3-202ENST00000391918 702 ntTSL 2 BASIC14.07□□□□□ -0.16
AP1S3Q96PC3 STAG3L3-201ENST00000423834 1262 ntTSL 2 BASIC14.07□□□□□ -0.16
AP1S3Q96PC3 AC022509.3-202ENST00000545819 566 ntTSL 3 BASIC14.07□□□□□ -0.16
AP1S3Q96PC3 C15orf56-202ENST00000623360 2129 ntTSL 2 BASIC14.07□□□□□ -0.16
Retrieved 100 of 98,524 protein–RNA pairs in 23.1 ms