Protein–RNA interactions for Protein: Q96II8

LRCH3, Leucine-rich repeat and calponin homology domain-containing protein 3, humanhuman

Predictions only

Length 777 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LRCH3Q96II8 MIPEPP3-202ENST00000424756 347 ntTSL 3 BASIC20.15■□□□□ 0.82
LRCH3Q96II8 FGFR3P6-201ENST00000457012 610 ntBASIC20.15■□□□□ 0.82
LRCH3Q96II8 PUDP-206ENST00000540122 825 ntTSL 2 BASIC20.15■□□□□ 0.82
LRCH3Q96II8 GSTZ1-218ENST00000557053 580 ntTSL 3 BASIC20.15■□□□□ 0.82
LRCH3Q96II8 AC034238.1-212ENST00000596137 723 ntTSL 5 BASIC20.15■□□□□ 0.82
LRCH3Q96II8 ORC5-208ENST00000626700 344 ntTSL 3 BASIC20.15■□□□□ 0.82
LRCH3Q96II8 LINC01714-202ENST00000635451 896 ntTSL 5 BASIC20.15■□□□□ 0.82
LRCH3Q96II8 CYP2D7-203ENST00000433992 1740 ntTSL 1 (best) BASIC20.15■□□□□ 0.82
LRCH3Q96II8 CYP2D7-207ENST00000612115 1734 ntAPPRIS P1 TSL 5 BASIC20.15■□□□□ 0.82
LRCH3Q96II8 RGMA-208ENST00000556658 1889 ntTSL 1 (best) BASIC20.15■□□□□ 0.82
LRCH3Q96II8 TMEM204-202ENST00000566264 1938 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
LRCH3Q96II8 ZNF773-204ENST00000598770 2019 ntAPPRIS ALT2 TSL 2 BASIC20.15■□□□□ 0.82
LRCH3Q96II8 KRTAP5-AS1-201ENST00000424148 2265 ntTSL 2 BASIC20.15■□□□□ 0.82
LRCH3Q96II8 PGAM5-203ENST00000498926 2834 ntAPPRIS P1 TSL 2 BASIC20.15■□□□□ 0.82
LRCH3Q96II8 NTNG2-202ENST00000393229 4792 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
LRCH3Q96II8 PRKAG2-203ENST00000418337 2318 ntTSL 1 (best) BASIC20.14■□□□□ 0.82
LRCH3Q96II8 ABCC5-204ENST00000392579 1848 ntTSL 1 (best) BASIC20.14■□□□□ 0.81
LRCH3Q96II8 RHBDL1-201ENST00000219551 1560 ntTSL 1 (best) BASIC20.14■□□□□ 0.81
LRCH3Q96II8 PPM1L-204ENST00000497343 1589 ntTSL 2 BASIC20.14■□□□□ 0.81
LRCH3Q96II8 PLAUR-203ENST00000340093 1548 ntAPPRIS P3 TSL 1 (best) BASIC20.14■□□□□ 0.81
LRCH3Q96II8 ARHGEF7-202ENST00000317133 4361 ntAPPRIS ALT2 TSL 1 (best) BASIC20.14■□□□□ 0.81
LRCH3Q96II8 TMEM128-202ENST00000382753 1221 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
LRCH3Q96II8 KRT18P23-201ENST00000435622 1283 ntBASIC20.14■□□□□ 0.81
LRCH3Q96II8 AC122138.1-201ENST00000508799 646 ntTSL 2 BASIC20.14■□□□□ 0.81
LRCH3Q96II8 MIR3180-5-201ENST00000583743 153 ntBASIC20.14■□□□□ 0.81
LRCH3Q96II8 Z83851.2-201ENST00000609564 659 ntBASIC20.14■□□□□ 0.81
LRCH3Q96II8 SELENOM-210ENST00000611680 689 ntAPPRIS ALT2 TSL 5 BASIC20.14■□□□□ 0.81
LRCH3Q96II8 AC106028.4-201ENST00000614509 607 ntBASIC20.14■□□□□ 0.81
LRCH3Q96II8 FGF2-202ENST00000608478 3880 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
LRCH3Q96II8 REV1-201ENST00000258428 4751 ntAPPRIS P3 TSL 1 (best) BASIC20.14■□□□□ 0.81
LRCH3Q96II8 FASTK-201ENST00000297532 1827 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
LRCH3Q96II8 CCDC71-201ENST00000321895 1781 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
LRCH3Q96II8 PML-204ENST00000359928 1726 ntTSL 1 (best) BASIC20.13■□□□□ 0.81
LRCH3Q96II8 CLDN6-202ENST00000396925 1739 ntAPPRIS P1 TSL 5 BASIC20.13■□□□□ 0.81
LRCH3Q96II8 ERCC2-205ENST00000485403 1538 ntTSL 1 (best) BASIC20.13■□□□□ 0.81
LRCH3Q96II8 BCS1L-201ENST00000359273 1454 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
LRCH3Q96II8 ARMC9-201ENST00000349938 2300 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
LRCH3Q96II8 HTD2-206ENST00000481972 1378 ntAPPRIS P1 TSL 2 BASIC20.13■□□□□ 0.81
LRCH3Q96II8 CYP27A1-201ENST00000258415 2286 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
LRCH3Q96II8 LYN-202ENST00000519728 2297 ntAPPRIS P3 TSL 1 (best) BASIC20.13■□□□□ 0.81
LRCH3Q96II8 FCN2-201ENST00000291744 1057 ntAPPRIS P2 TSL 1 (best) BASIC20.13■□□□□ 0.81
LRCH3Q96II8 BOLA1-202ENST00000369152 859 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
LRCH3Q96II8 TXNDC5-201ENST00000379757 2964 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
LRCH3Q96II8 ZGLP1-201ENST00000403352 1028 ntAPPRIS ALT2 TSL 5 BASIC20.13■□□□□ 0.81
LRCH3Q96II8 JMJD7-203ENST00000408047 1192 ntTSL 5 BASIC20.13■□□□□ 0.81
LRCH3Q96II8 IL17RC-205ENST00000413608 2147 ntAPPRIS ALT2 TSL 1 (best) BASIC20.13■□□□□ 0.81
LRCH3Q96II8 AL645939.2-201ENST00000427340 991 ntBASIC20.13■□□□□ 0.81
LRCH3Q96II8 COX18-204ENST00000507544 1086 ntAPPRIS ALT1 TSL 1 (best) BASIC20.13■□□□□ 0.81
LRCH3Q96II8 UBE2V2-201ENST00000517630 612 ntTSL 4 BASIC20.13■□□□□ 0.81
LRCH3Q96II8 LINC02387-201ENST00000541749 868 ntTSL 1 (best) BASIC20.13■□□□□ 0.81
LRCH3Q96II8 CCL3-204ENST00000613922 778 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
LRCH3Q96II8 HMGN3-203ENST00000620514 1010 ntTSL 3 BASIC20.13■□□□□ 0.81
LRCH3Q96II8 HDAC2-201ENST00000368632 2084 ntTSL 2 BASIC20.13■□□□□ 0.81
LRCH3Q96II8 ADAM9-203ENST00000466936 2053 ntTSL 2 BASIC20.13■□□□□ 0.81
LRCH3Q96II8 SUSD1-203ENST00000374264 2754 ntAPPRIS ALT2 TSL 1 (best) BASIC20.13■□□□□ 0.81
LRCH3Q96II8 NDUFAF6-203ENST00000396124 1798 ntAPPRIS P1 TSL 2 BASIC20.13■□□□□ 0.81
LRCH3Q96II8 AL161756.1-202ENST00000359491 1717 ntTSL 1 (best) BASIC20.13■□□□□ 0.81
LRCH3Q96II8 AC023830.1-201ENST00000569678 1543 ntTSL 2 BASIC20.12■□□□□ 0.81
LRCH3Q96II8 PABPC1L-204ENST00000255136 2129 ntAPPRIS P1 TSL 5 BASIC20.12■□□□□ 0.81
LRCH3Q96II8 HDAC11-211ENST00000433119 2043 ntTSL 1 (best) BASIC20.12■□□□□ 0.81
LRCH3Q96II8 FAM43B-201ENST00000332947 2572 ntAPPRIS P1 BASIC20.12■□□□□ 0.81
LRCH3Q96II8 PLIN2-201ENST00000276914 1972 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
LRCH3Q96II8 AC005329.3-201ENST00000626781 1366 ntTSL 5 BASIC20.12■□□□□ 0.81
LRCH3Q96II8 MMP17-201ENST00000360564 2411 ntAPPRIS P2 TSL 1 (best) BASIC20.12■□□□□ 0.81
LRCH3Q96II8 SCFD2-204ENST00000611795 1320 ntTSL 5 BASIC20.12■□□□□ 0.81
LRCH3Q96II8 NUDT11-201ENST00000375992 2385 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
LRCH3Q96II8 ME2-216ENST00000639850 2331 ntTSL 5 BASIC20.12■□□□□ 0.81
LRCH3Q96II8 PDCD2L-201ENST00000246535 1171 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
LRCH3Q96II8 ATP23-201ENST00000300145 1245 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
LRCH3Q96II8 ZNF7-201ENST00000325217 592 ntTSL 4 BASIC20.12■□□□□ 0.81
LRCH3Q96II8 BRCC3-202ENST00000340647 1101 ntAPPRIS P2 TSL 2 BASIC20.12■□□□□ 0.81
LRCH3Q96II8 SFT2D1-201ENST00000361731 1079 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
LRCH3Q96II8 FAM99B-201ENST00000382166 1067 ntTSL 5 BASIC20.12■□□□□ 0.81
LRCH3Q96II8 POMC-203ENST00000395826 959 ntAPPRIS P1 TSL 2 BASIC20.12■□□□□ 0.81
LRCH3Q96II8 AC023274.1-201ENST00000418278 595 ntBASIC20.12■□□□□ 0.81
LRCH3Q96II8 AC092910.1-201ENST00000482027 1129 ntBASIC20.12■□□□□ 0.81
LRCH3Q96II8 NDUFAF2-203ENST00000511107 586 ntTSL 1 (best) BASIC20.12■□□□□ 0.81
LRCH3Q96II8 LINC01413-201ENST00000564843 772 ntTSL 3 BASIC20.12■□□□□ 0.81
LRCH3Q96II8 AC018521.5-202ENST00000577279 374 ntTSL 3 BASIC20.12■□□□□ 0.81
LRCH3Q96II8 AC005306.1-201ENST00000587498 661 ntTSL 3 BASIC20.12■□□□□ 0.81
LRCH3Q96II8 BCL2L12-210ENST00000611631 1259 ntTSL 1 (best) BASIC20.12■□□□□ 0.81
LRCH3Q96II8 MIR1199-201ENST00000621445 119 ntBASIC20.12■□□□□ 0.81
LRCH3Q96II8 AL359644.1-202ENST00000637541 571 ntTSL 3 BASIC20.12■□□□□ 0.81
LRCH3Q96II8 SLC2A8-215ENST00000610552 1763 ntTSL 3 BASIC20.12■□□□□ 0.81
LRCH3Q96II8 AL391422.3-201ENST00000603791 2761 ntBASIC20.12■□□□□ 0.81
LRCH3Q96II8 PTPRJ-208ENST00000615445 4773 ntAPPRIS ALT2 TSL 5 BASIC20.12■□□□□ 0.81
LRCH3Q96II8 ESR2-212ENST00000556275 2695 ntTSL 2 BASIC20.12■□□□□ 0.81
LRCH3Q96II8 LRRC23-209ENST00000443597 1628 ntAPPRIS P4 TSL 1 (best) BASIC20.12■□□□□ 0.81
LRCH3Q96II8 PEX16-210ENST00000532681 1639 ntTSL 3 BASIC20.12■□□□□ 0.81
LRCH3Q96II8 SPNS1-203ENST00000334536 2027 ntTSL 1 (best) BASIC20.12■□□□□ 0.81
LRCH3Q96II8 CAMK2B-203ENST00000347193 1577 ntTSL 1 (best) BASIC20.12■□□□□ 0.81
LRCH3Q96II8 C17orf67-201ENST00000397861 2013 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
LRCH3Q96II8 TH-202ENST00000333684 1535 ntTSL 1 (best) BASIC20.12■□□□□ 0.81
LRCH3Q96II8 SNUPN-205ENST00000564644 1931 ntAPPRIS P1 TSL 2 BASIC20.12■□□□□ 0.81
LRCH3Q96II8 SHCBP1L-201ENST00000367547 2317 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
LRCH3Q96II8 SIMC1-203ENST00000429602 2694 ntAPPRIS ALT2 TSL 1 (best) BASIC20.11■□□□□ 0.81
LRCH3Q96II8 DNAAF3-207ENST00000527223 2228 ntAPPRIS ALT2 TSL 2 BASIC20.11■□□□□ 0.81
LRCH3Q96II8 CNTNAP3B-212ENST00000617422 2170 ntTSL 2 BASIC20.11■□□□□ 0.81
LRCH3Q96II8 NTRK3-206ENST00000540489 2145 ntTSL 5 BASIC20.11■□□□□ 0.81
LRCH3Q96II8 LGI3-202ENST00000424267 3114 ntTSL 1 (best) BASIC20.11■□□□□ 0.81
Retrieved 100 of 98,524 protein–RNA pairs in 23.5 ms