Protein–RNA interactions for Protein: Q96AX1

VPS33A, Vacuolar protein sorting-associated protein 33A, humanhuman

Predictions only

Length 596 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VPS33AQ96AX1 RETREG1-201ENST00000306320 3268 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
VPS33AQ96AX1 ULK3-220ENST00000569437 2611 ntAPPRIS ALT1 TSL 1 (best) BASIC17.94■□□□□ 0.46
VPS33AQ96AX1 PLAUR-203ENST00000340093 1548 ntAPPRIS P3 TSL 1 (best) BASIC17.94■□□□□ 0.46
VPS33AQ96AX1 VASH1-201ENST00000167106 5728 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
VPS33AQ96AX1 POMC-201ENST00000264708 1074 ntAPPRIS P1 TSL 2 BASIC17.94■□□□□ 0.46
VPS33AQ96AX1 SDHC-201ENST00000342751 1127 ntTSL 1 (best) BASIC17.94■□□□□ 0.46
VPS33AQ96AX1 OGG1-209ENST00000383826 1069 ntTSL 5 BASIC17.94■□□□□ 0.46
VPS33AQ96AX1 CA3-AS1-201ENST00000517697 559 ntTSL 4 BASIC17.94■□□□□ 0.46
VPS33AQ96AX1 RNASEK-202ENST00000548577 810 ntTSL 1 (best) BASIC17.94■□□□□ 0.46
VPS33AQ96AX1 CNNM3-201ENST00000305510 3447 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
VPS33AQ96AX1 FMR1-206ENST00000370477 3437 ntTSL 5 BASIC17.94■□□□□ 0.46
VPS33AQ96AX1 GCSH-201ENST00000315467 1597 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
VPS33AQ96AX1 POLI-207ENST00000579434 2705 ntTSL 1 (best) BASIC17.94■□□□□ 0.46
VPS33AQ96AX1 QPRT-202ENST00000395384 2343 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
VPS33AQ96AX1 RFC2-213ENST00000621097 1635 ntTSL 5 BASIC17.94■□□□□ 0.46
VPS33AQ96AX1 AP2M1-201ENST00000292807 1931 ntAPPRIS P4 TSL 5 BASIC17.94■□□□□ 0.46
VPS33AQ96AX1 KLHL33-202ENST00000636854 2394 ntAPPRIS P1 TSL 5 BASIC17.94■□□□□ 0.46
VPS33AQ96AX1 MAPKAPK3-201ENST00000357955 2500 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
VPS33AQ96AX1 BRI3BP-201ENST00000341446 6648 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
VPS33AQ96AX1 SCARB1-203ENST00000415380 2731 ntTSL 2 BASIC17.93■□□□□ 0.46
VPS33AQ96AX1 CACNA1A-214ENST00000614285 8410 ntAPPRIS ALT2 TSL 5 BASIC17.93■□□□□ 0.46
VPS33AQ96AX1 MAFK-201ENST00000343242 3368 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
VPS33AQ96AX1 TDRKH-207ENST00000458431 2768 ntAPPRIS P2 TSL 1 (best) BASIC17.93■□□□□ 0.46
VPS33AQ96AX1 CORO1C-204ENST00000541050 2487 ntAPPRIS P1 TSL 2 BASIC17.93■□□□□ 0.46
VPS33AQ96AX1 KAT2A-201ENST00000225916 3109 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
VPS33AQ96AX1 AP005717.1-201ENST00000500705 1899 ntTSL 5 BASIC17.93■□□□□ 0.46
VPS33AQ96AX1 PRRT1-202ENST00000375150 1726 ntTSL 1 (best) BASIC17.93■□□□□ 0.46
VPS33AQ96AX1 NPBWR1-201ENST00000331251 2687 ntAPPRIS P1 BASIC17.93■□□□□ 0.46
VPS33AQ96AX1 ATP6V1G2-205ENST00000303892 1588 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
VPS33AQ96AX1 HLA-G-205ENST00000428701 1578 ntAPPRIS P2 BASIC17.93■□□□□ 0.46
VPS33AQ96AX1 FCMR-202ENST00000442471 1441 ntTSL 2 BASIC17.93■□□□□ 0.46
VPS33AQ96AX1 COQ10B-203ENST00000409398 879 ntTSL 3 BASIC17.93■□□□□ 0.46
VPS33AQ96AX1 EP300-AS1-201ENST00000420537 457 ntTSL 3 BASIC17.93■□□□□ 0.46
VPS33AQ96AX1 H1FX-AS1-204ENST00000511998 917 ntTSL 5 BASIC17.93■□□□□ 0.46
VPS33AQ96AX1 AC142086.2-201ENST00000569753 217 ntBASIC17.93■□□□□ 0.46
VPS33AQ96AX1 AC127496.6-201ENST00000576215 338 ntTSL 3 BASIC17.93■□□□□ 0.46
VPS33AQ96AX1 AC104771.1-201ENST00000603335 964 ntBASIC17.93■□□□□ 0.46
VPS33AQ96AX1 AC004264.1-201ENST00000608354 794 ntBASIC17.93■□□□□ 0.46
VPS33AQ96AX1 AC005225.2-202ENST00000617980 408 ntTSL 4 BASIC17.93■□□□□ 0.46
VPS33AQ96AX1 LSM4-203ENST00000593829 1908 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
VPS33AQ96AX1 RNFT2-204ENST00000407967 2415 ntTSL 5 BASIC17.93■□□□□ 0.46
VPS33AQ96AX1 RABL6-201ENST00000311502 3091 ntAPPRIS P3 TSL 1 (best) BASIC17.93■□□□□ 0.46
VPS33AQ96AX1 JAG1-201ENST00000254958 6048 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
VPS33AQ96AX1 SEPT2-245ENST00000616972 3446 ntTSL 2 BASIC17.93■□□□□ 0.46
VPS33AQ96AX1 CDKN2B-AS1-217ENST00000585267 1337 ntTSL 1 (best) BASIC17.93■□□□□ 0.46
VPS33AQ96AX1 IL17RC-206ENST00000416074 2342 ntAPPRIS ALT2 TSL 1 (best) BASIC17.93■□□□□ 0.46
VPS33AQ96AX1 ANKRD18DP-201ENST00000335478 2171 ntTSL 2 BASIC17.93■□□□□ 0.46
VPS33AQ96AX1 SLC44A3-201ENST00000271227 2388 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
VPS33AQ96AX1 OSM-201ENST00000215781 1854 ntAPPRIS P3 TSL 1 (best) BASIC17.92■□□□□ 0.46
VPS33AQ96AX1 RHBDL1-201ENST00000219551 1560 ntTSL 1 (best) BASIC17.92■□□□□ 0.46
VPS33AQ96AX1 SERGEF-201ENST00000265965 1566 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
VPS33AQ96AX1 ZNF420-201ENST00000304239 1945 ntTSL 2 BASIC17.92■□□□□ 0.46
VPS33AQ96AX1 AL162741.1-201ENST00000565563 1558 ntBASIC17.92■□□□□ 0.46
VPS33AQ96AX1 GSDMD-206ENST00000526406 2496 ntAPPRIS P2 TSL 2 BASIC17.92■□□□□ 0.46
VPS33AQ96AX1 BCR-201ENST00000305877 7082 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
VPS33AQ96AX1 SPC24-206ENST00000592540 2315 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
VPS33AQ96AX1 STX3-201ENST00000337979 3299 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
VPS33AQ96AX1 GPSM1-203ENST00000392944 1111 ntTSL 3 BASIC17.92■□□□□ 0.46
VPS33AQ96AX1 DYNLT3-203ENST00000432389 719 ntTSL 5 BASIC17.92■□□□□ 0.46
VPS33AQ96AX1 DHRS4-206ENST00000558581 1143 ntTSL 1 (best) BASIC17.92■□□□□ 0.46
VPS33AQ96AX1 AC013268.1-201ENST00000639717 1208 ntTSL 5 BASIC17.92■□□□□ 0.46
VPS33AQ96AX1 PPAN-P2RY11-201ENST00000393796 2385 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
VPS33AQ96AX1 SLC43A1-201ENST00000278426 2598 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
VPS33AQ96AX1 RAB4B-EGLN2-201ENST00000594136 2554 ntAPPRIS P1 TSL 2 BASIC17.92■□□□□ 0.46
VPS33AQ96AX1 KATNBL1P6-202ENST00000562413 1466 ntBASIC17.92■□□□□ 0.46
VPS33AQ96AX1 GNAZ-203ENST00000615612 3333 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
VPS33AQ96AX1 PCDHB2-202ENST00000622947 2231 ntTSL 1 (best) BASIC17.92■□□□□ 0.46
VPS33AQ96AX1 ASZ1-201ENST00000284629 1865 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
VPS33AQ96AX1 GRIN3B-201ENST00000234389 3281 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
VPS33AQ96AX1 FAM3A-203ENST00000369641 1359 ntTSL 5 BASIC17.91■□□□□ 0.46
VPS33AQ96AX1 CEMP1-202ENST00000567119 1374 ntAPPRIS P2 BASIC17.91■□□□□ 0.46
VPS33AQ96AX1 TCP11-209ENST00000444780 1841 ntAPPRIS ALT2 TSL 2 BASIC17.91■□□□□ 0.46
VPS33AQ96AX1 FZD10-201ENST00000229030 3281 ntAPPRIS P1 BASIC17.91■□□□□ 0.46
VPS33AQ96AX1 ADRA1A-205ENST00000380582 2089 ntTSL 1 (best) BASIC17.91■□□□□ 0.46
VPS33AQ96AX1 RPRM-201ENST00000325926 1471 ntAPPRIS P1 BASIC17.91■□□□□ 0.46
VPS33AQ96AX1 CKLF-201ENST00000264001 669 ntAPPRIS P4 TSL 1 (best) BASIC17.91■□□□□ 0.46
VPS33AQ96AX1 LINC00708-201ENST00000428165 916 ntTSL 1 (best) BASIC17.91■□□□□ 0.46
VPS33AQ96AX1 CCDC124-201ENST00000445755 938 ntAPPRIS P1 TSL 2 BASIC17.91■□□□□ 0.46
VPS33AQ96AX1 ZNF302-209ENST00000507959 854 ntTSL 2 BASIC17.91■□□□□ 0.46
VPS33AQ96AX1 UNC93B5-201ENST00000530315 699 ntBASIC17.91■□□□□ 0.46
VPS33AQ96AX1 TP53I11-215ENST00000531928 1078 ntTSL 3 BASIC17.91■□□□□ 0.46
VPS33AQ96AX1 CCDC124-203ENST00000597436 1055 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
VPS33AQ96AX1 AC068587.9-201ENST00000641814 219 ntBASIC17.91■□□□□ 0.46
VPS33AQ96AX1 CPEB3-203ENST00000614585 5789 ntAPPRIS P3 TSL 5 BASIC17.91■□□□□ 0.46
VPS33AQ96AX1 ISM2-207ENST00000493585 1739 ntTSL 1 (best) BASIC17.91■□□□□ 0.46
VPS33AQ96AX1 PIGQ-203ENST00000321878 3006 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
VPS33AQ96AX1 NRBP1-204ENST00000379863 2174 ntTSL 5 BASIC17.91■□□□□ 0.46
VPS33AQ96AX1 RNASEH2C-203ENST00000528220 1337 ntTSL 2 BASIC17.91■□□□□ 0.46
VPS33AQ96AX1 PDLIM3-202ENST00000284770 1766 ntTSL 1 (best) BASIC17.91■□□□□ 0.46
VPS33AQ96AX1 PHKG1-205ENST00000452681 2226 ntTSL 2 BASIC17.91■□□□□ 0.46
VPS33AQ96AX1 POM121C-208ENST00000615331 5835 ntAPPRIS P2 TSL 1 (best) BASIC17.91■□□□□ 0.46
VPS33AQ96AX1 FOXD4L1-201ENST00000306507 2491 ntAPPRIS P1 BASIC17.91■□□□□ 0.46
VPS33AQ96AX1 AC135776.1-201ENST00000319817 2481 ntBASIC17.91■□□□□ 0.46
VPS33AQ96AX1 CYP46A1-202ENST00000380228 1597 ntTSL 2 BASIC17.91■□□□□ 0.46
VPS33AQ96AX1 SOD2-206ENST00000452684 2045 ntTSL 1 (best) BASIC17.91■□□□□ 0.46
VPS33AQ96AX1 SCARB2-201ENST00000264896 4792 ntAPPRIS P2 TSL 1 (best) BASIC17.91■□□□□ 0.46
VPS33AQ96AX1 MAP4K4-202ENST00000324219 7526 ntTSL 5 BASIC17.91■□□□□ 0.46
VPS33AQ96AX1 CHMP4A-201ENST00000347519 1393 ntTSL 1 (best) BASIC17.91■□□□□ 0.46
VPS33AQ96AX1 TTLL8-201ENST00000266182 2505 ntAPPRIS ALT2 TSL 5 BASIC17.91■□□□□ 0.46
VPS33AQ96AX1 PLCH2-203ENST00000378486 4837 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
Retrieved 100 of 98,524 protein–RNA pairs in 32.4 ms