Protein–RNA interactions for Protein: Q93096

PTP4A1, Protein tyrosine phosphatase type IVA 1, humanhuman

Predictions only

Length 173 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PTP4A1Q93096 QRICH1-201ENST00000357496 3083 ntAPPRIS P1 TSL 2 BASIC16.76■□□□□ 0.27
PTP4A1Q93096 TMEM91-210ENST00000542945 1610 ntTSL 2 BASIC16.76■□□□□ 0.27
PTP4A1Q93096 PRMT2-203ENST00000355680 2688 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
PTP4A1Q93096 APP-203ENST00000354192 3167 ntTSL 1 (best) BASIC16.76■□□□□ 0.27
PTP4A1Q93096 PIP4K2C-202ENST00000422156 1558 ntTSL 2 BASIC16.76■□□□□ 0.27
PTP4A1Q93096 MAFG-201ENST00000357736 5040 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
PTP4A1Q93096 AL355987.1-201ENST00000435202 2420 ntAPPRIS P1 TSL 2 BASIC16.76■□□□□ 0.27
PTP4A1Q93096 MAEA-201ENST00000264750 2058 ntTSL 2 BASIC16.76■□□□□ 0.27
PTP4A1Q93096 ADRA1A-205ENST00000380582 2089 ntTSL 1 (best) BASIC16.76■□□□□ 0.27
PTP4A1Q93096 AC008764.6-201ENST00000595909 2069 ntBASIC16.76■□□□□ 0.27
PTP4A1Q93096 GTF2H4-201ENST00000259895 1735 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
PTP4A1Q93096 CSF1-203ENST00000369801 1364 ntTSL 1 (best) BASIC16.76■□□□□ 0.27
PTP4A1Q93096 DYNLL1-209ENST00000550845 1376 ntTSL 1 (best) BASIC16.76■□□□□ 0.27
PTP4A1Q93096 PGRMC2-208ENST00000613358 3783 ntTSL 1 (best) BASIC16.76■□□□□ 0.27
PTP4A1Q93096 POC1B-GALNT4-201ENST00000547474 2207 ntTSL 2 BASIC16.76■□□□□ 0.27
PTP4A1Q93096 POLI-207ENST00000579434 2705 ntTSL 1 (best) BASIC16.76■□□□□ 0.27
PTP4A1Q93096 SOGA3-203ENST00000525778 4077 ntAPPRIS P1 TSL 5 BASIC16.75■□□□□ 0.27
PTP4A1Q93096 HSPA4-205ENST00000617074 2358 ntTSL 5 BASIC16.75■□□□□ 0.27
PTP4A1Q93096 SRMS-201ENST00000217188 1516 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
PTP4A1Q93096 TAPT1-201ENST00000405303 4591 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
PTP4A1Q93096 TNFRSF1A-213ENST00000540022 1527 ntTSL 1 (best) BASIC16.75■□□□□ 0.27
PTP4A1Q93096 OGFOD3-202ENST00000329197 1652 ntTSL 1 (best) BASIC16.75■□□□□ 0.27
PTP4A1Q93096 AC124066.1-201ENST00000581122 1660 ntTSL 5 BASIC16.75■□□□□ 0.27
PTP4A1Q93096 TMEM132A-201ENST00000005286 3480 ntAPPRIS P3 TSL 5 BASIC16.75■□□□□ 0.27
PTP4A1Q93096 AFG3L1P-203ENST00000418696 2965 ntTSL 2 BASIC16.75■□□□□ 0.27
PTP4A1Q93096 NOM1-201ENST00000275820 6077 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
PTP4A1Q93096 DLK1-202ENST00000341267 4722 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
PTP4A1Q93096 GJA4-201ENST00000342280 1622 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
PTP4A1Q93096 PDLIM3-201ENST00000284767 2589 ntTSL 5 BASIC16.75■□□□□ 0.27
PTP4A1Q93096 GNE-201ENST00000377902 2565 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
PTP4A1Q93096 PMAIP1-202ENST00000316660 1948 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
PTP4A1Q93096 FIBIN-201ENST00000318627 1938 ntAPPRIS P1 BASIC16.75■□□□□ 0.27
PTP4A1Q93096 NPEPL1-204ENST00000525967 1917 ntTSL 1 (best) BASIC16.75■□□□□ 0.27
PTP4A1Q93096 IL17C-201ENST00000244241 1044 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
PTP4A1Q93096 FITM1-201ENST00000267426 1194 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
PTP4A1Q93096 MRGPRG-201ENST00000332314 870 ntAPPRIS P1 BASIC16.75■□□□□ 0.27
PTP4A1Q93096 ABHD17AP1-201ENST00000358206 933 ntBASIC16.75■□□□□ 0.27
PTP4A1Q93096 FAM86C1-203ENST00000426628 952 ntAPPRIS ALT2 TSL 2 BASIC16.75■□□□□ 0.27
PTP4A1Q93096 MAGI2-AS3-211ENST00000451809 707 ntTSL 3 BASIC16.75■□□□□ 0.27
PTP4A1Q93096 SBF2-AS1-202ENST00000499953 854 ntTSL 5 BASIC16.75■□□□□ 0.27
PTP4A1Q93096 PRSS44-201ENST00000515154 1146 ntBASIC16.75■□□□□ 0.27
PTP4A1Q93096 RNF121-214ENST00000533380 870 ntTSL 3 BASIC16.75■□□□□ 0.27
PTP4A1Q93096 AC140479.4-201ENST00000561715 463 ntTSL 4 BASIC16.75■□□□□ 0.27
PTP4A1Q93096 AC142381.4-202ENST00000563973 229 ntBASIC16.75■□□□□ 0.27
PTP4A1Q93096 RPL23AP53-202ENST00000606507 370 ntTSL 3 BASIC16.75■□□□□ 0.27
PTP4A1Q93096 FAM197Y4-202ENST00000622692 608 ntBASIC16.75■□□□□ 0.27
PTP4A1Q93096 AC131212.4-201ENST00000623606 975 ntBASIC16.75■□□□□ 0.27
PTP4A1Q93096 SLC44A3-201ENST00000271227 2388 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
PTP4A1Q93096 KLHL33-202ENST00000636854 2394 ntAPPRIS P1 TSL 5 BASIC16.75■□□□□ 0.27
PTP4A1Q93096 ACAA1-209ENST00000450296 1570 ntTSL 5 BASIC16.75■□□□□ 0.27
PTP4A1Q93096 FAM110A-203ENST00000381939 1737 ntAPPRIS P1 TSL 3 BASIC16.75■□□□□ 0.27
PTP4A1Q93096 ZNF114-206ENST00000600687 1742 ntAPPRIS P1 TSL 5 BASIC16.75■□□□□ 0.27
PTP4A1Q93096 AP005717.1-201ENST00000500705 1899 ntTSL 5 BASIC16.75■□□□□ 0.27
PTP4A1Q93096 GPBAR1-202ENST00000519574 1382 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
PTP4A1Q93096 KRT81-202ENST00000615839 1505 ntAPPRIS ALT2 TSL 5 BASIC16.75■□□□□ 0.27
PTP4A1Q93096 ERICH1-201ENST00000262109 1813 ntAPPRIS P2 TSL 1 (best) BASIC16.75■□□□□ 0.27
PTP4A1Q93096 AC142086.1-202ENST00000398669 1839 ntTSL 2 BASIC16.75■□□□□ 0.27
PTP4A1Q93096 RARRES1-201ENST00000237696 1952 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
PTP4A1Q93096 T-201ENST00000296946 2436 ntAPPRIS P1 TSL 5 BASIC16.75■□□□□ 0.27
PTP4A1Q93096 PAK4-201ENST00000321944 2555 ntTSL 1 (best) BASIC16.75■□□□□ 0.27
PTP4A1Q93096 HTATSF1-204ENST00000535601 3019 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
PTP4A1Q93096 ZDHHC23-201ENST00000330212 3778 ntAPPRIS P2 TSL 1 (best) BASIC16.75■□□□□ 0.27
PTP4A1Q93096 MAPK8IP3-202ENST00000356010 4456 ntTSL 5 BASIC16.74■□□□□ 0.27
PTP4A1Q93096 ZBTB16-201ENST00000335953 2523 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
PTP4A1Q93096 MCOLN1-201ENST00000264079 2082 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
PTP4A1Q93096 KRT13-208ENST00000587544 1456 ntAPPRIS ALT2 TSL 1 (best) BASIC16.74■□□□□ 0.27
PTP4A1Q93096 NTRK1-203ENST00000392302 2609 ntTSL 5 BASIC16.74■□□□□ 0.27
PTP4A1Q93096 USP39-201ENST00000323701 2177 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
PTP4A1Q93096 MFSD10-205ENST00000507555 1573 ntTSL 5 BASIC16.74■□□□□ 0.27
PTP4A1Q93096 APMAP-201ENST00000217456 2430 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
PTP4A1Q93096 WISP2-201ENST00000190983 1403 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
PTP4A1Q93096 AC112777.1-201ENST00000540175 1423 ntBASIC16.74■□□□□ 0.27
PTP4A1Q93096 PRORSD1P-201ENST00000295112 541 ntBASIC16.74■□□□□ 0.27
PTP4A1Q93096 RPP25L-201ENST00000297613 1092 ntAPPRIS P1 TSL 2 BASIC16.74■□□□□ 0.27
PTP4A1Q93096 AC004980.1-204ENST00000429707 299 ntBASIC16.74■□□□□ 0.27
PTP4A1Q93096 A3GALT2-201ENST00000442999 1023 ntAPPRIS P1 TSL 5 BASIC16.74■□□□□ 0.27
PTP4A1Q93096 ATP6V0E1-204ENST00000519911 718 ntTSL 2 BASIC16.74■□□□□ 0.27
PTP4A1Q93096 BAALC-AS1-207ENST00000522856 594 ntTSL 3 BASIC16.74■□□□□ 0.27
PTP4A1Q93096 AC091564.2-201ENST00000527191 399 ntTSL 3 BASIC16.74■□□□□ 0.27
PTP4A1Q93096 SUMO2-203ENST00000578238 490 ntTSL 2 BASIC16.74■□□□□ 0.27
PTP4A1Q93096 PRORSD1P-203ENST00000579162 626 ntTSL 5 BASIC16.74■□□□□ 0.27
PTP4A1Q93096 AC010336.4-201ENST00000595655 438 ntTSL 5 BASIC16.74■□□□□ 0.27
PTP4A1Q93096 PNMA8A-203ENST00000602246 572 ntAPPRIS ALT2 TSL 4 BASIC16.74■□□□□ 0.27
PTP4A1Q93096 BX649632.1-201ENST00000610187 819 ntTSL 3 BASIC16.74■□□□□ 0.27
PTP4A1Q93096 AL359736.2-201ENST00000621992 437 ntBASIC16.74■□□□□ 0.27
PTP4A1Q93096 CABP2-204ENST00000636477 941 ntTSL 5 BASIC16.74■□□□□ 0.27
PTP4A1Q93096 TMEM191A-211ENST00000637163 1067 ntBASIC16.74■□□□□ 0.27
PTP4A1Q93096 FAM117B-201ENST00000392238 5763 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
PTP4A1Q93096 PHF12-202ENST00000332830 4759 ntAPPRIS P1 TSL 2 BASIC16.74■□□□□ 0.27
PTP4A1Q93096 CCDC120-204ENST00000597275 2752 ntAPPRIS P3 TSL 2 BASIC16.74■□□□□ 0.27
PTP4A1Q93096 MBD3-201ENST00000156825 5518 ntTSL 1 (best) BASIC16.74■□□□□ 0.27
PTP4A1Q93096 NDN-201ENST00000331837 1931 ntAPPRIS P1 BASIC16.74■□□□□ 0.27
PTP4A1Q93096 TBP-202ENST00000392092 1903 ntAPPRIS P3 TSL 1 (best) BASIC16.74■□□□□ 0.27
PTP4A1Q93096 PCBP4-210ENST00000471622 1784 ntTSL 5 BASIC16.74■□□□□ 0.27
PTP4A1Q93096 AC063977.6-201ENST00000600074 1763 ntTSL 1 (best) BASIC16.74■□□□□ 0.27
PTP4A1Q93096 NCOA6-207ENST00000616167 3271 ntAPPRIS ALT2 TSL 5 BASIC16.74■□□□□ 0.27
PTP4A1Q93096 TFEB-206ENST00000403298 2162 ntAPPRIS P1 TSL 5 BASIC16.74■□□□□ 0.27
PTP4A1Q93096 NECAB1-201ENST00000417640 5289 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
PTP4A1Q93096 TTLL12-201ENST00000216129 3385 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
PTP4A1Q93096 TMEM25-203ENST00000354284 1456 ntTSL 2 BASIC16.73■□□□□ 0.27
Retrieved 100 of 98,524 protein–RNA pairs in 31.5 ms