Protein–RNA interactions for Protein: Q8WXH6

RAB40A, Ras-related protein Rab-40A, humanhuman

Predictions only

Length 277 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RAB40AQ8WXH6 TAB2-209ENST00000637181 4230 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
RAB40AQ8WXH6 CD1E-205ENST00000368160 1727 ntAPPRIS ALT2 TSL 1 (best) BASIC16.42■□□□□ 0.22
RAB40AQ8WXH6 ALDH4A1-201ENST00000290597 2124 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
RAB40AQ8WXH6 ADCY6-202ENST00000357869 5748 ntTSL 2 BASIC16.42■□□□□ 0.22
RAB40AQ8WXH6 MAPRE3-201ENST00000233121 1892 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
RAB40AQ8WXH6 RIPK2-201ENST00000220751 2584 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
RAB40AQ8WXH6 SELENOF-201ENST00000331835 1781 ntAPPRIS P2 TSL 1 (best) BASIC16.41■□□□□ 0.22
RAB40AQ8WXH6 IL15-201ENST00000296545 2472 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
RAB40AQ8WXH6 ACADS-202ENST00000411593 1398 ntTSL 2 BASIC16.41■□□□□ 0.22
RAB40AQ8WXH6 NFE2-204ENST00000553070 1523 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
RAB40AQ8WXH6 FAM213B-202ENST00000378425 2665 ntAPPRIS ALT2 TSL 2 BASIC16.41■□□□□ 0.22
RAB40AQ8WXH6 NDRG2-227ENST00000554143 1980 ntAPPRIS ALT1 TSL 2 BASIC16.41■□□□□ 0.22
RAB40AQ8WXH6 SULT1A1-202ENST00000350842 1282 ntTSL 3 BASIC16.41■□□□□ 0.22
RAB40AQ8WXH6 GLYCTK-205ENST00000473032 935 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
RAB40AQ8WXH6 AC035140.1-201ENST00000507957 493 ntTSL 3 BASIC16.41■□□□□ 0.22
RAB40AQ8WXH6 AC069185.1-201ENST00000531395 811 ntTSL 3 BASIC16.41■□□□□ 0.22
RAB40AQ8WXH6 TGIF1-219ENST00000551541 990 ntTSL 2 BASIC16.41■□□□□ 0.22
RAB40AQ8WXH6 PNN-205ENST00000556530 601 ntTSL 2 BASIC16.41■□□□□ 0.22
RAB40AQ8WXH6 AC090877.2-202ENST00000560363 574 ntTSL 2 BASIC16.41■□□□□ 0.22
RAB40AQ8WXH6 AC009093.4-201ENST00000567984 561 ntTSL 4 BASIC16.41■□□□□ 0.22
RAB40AQ8WXH6 TRIM47-201ENST00000254816 2266 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
RAB40AQ8WXH6 ST6GALNAC6-201ENST00000291839 2280 ntAPPRIS P3 TSL 1 (best) BASIC16.41■□□□□ 0.22
RAB40AQ8WXH6 MAPKAPK3-208ENST00000621469 2563 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
RAB40AQ8WXH6 RRS1-201ENST00000320270 1706 ntAPPRIS P1 BASIC16.41■□□□□ 0.22
RAB40AQ8WXH6 DUSP1-201ENST00000239223 2019 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
RAB40AQ8WXH6 TRIM50-201ENST00000333149 2047 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
RAB40AQ8WXH6 QPRT-202ENST00000395384 2343 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
RAB40AQ8WXH6 TAF4B-201ENST00000269142 5260 ntAPPRIS P3 TSL 1 (best) BASIC16.41■□□□□ 0.22
RAB40AQ8WXH6 FAM58A-204ENST00000576892 1306 ntAPPRIS ALT2 TSL 1 (best) BASIC16.41■□□□□ 0.22
RAB40AQ8WXH6 MAP2K2-202ENST00000394867 1471 ntTSL 5 BASIC16.41■□□□□ 0.22
RAB40AQ8WXH6 TSPAN4-204ENST00000397404 1462 ntAPPRIS P1 TSL 5 BASIC16.41■□□□□ 0.22
RAB40AQ8WXH6 AL590648.2-201ENST00000427949 2225 ntTSL 2 BASIC16.41■□□□□ 0.22
RAB40AQ8WXH6 TXNRD3-203ENST00000524230 2950 ntAPPRIS ALT2 TSL 1 (best) BASIC16.41■□□□□ 0.22
RAB40AQ8WXH6 EDA-204ENST00000374553 5272 ntAPPRIS ALT1 TSL 1 (best) BASIC16.4■□□□□ 0.22
RAB40AQ8WXH6 SLC43A1-201ENST00000278426 2598 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
RAB40AQ8WXH6 GNE-201ENST00000377902 2565 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
RAB40AQ8WXH6 ACADS-201ENST00000242592 1950 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
RAB40AQ8WXH6 FDXR-214ENST00000581530 1827 ntAPPRIS P3 TSL 1 (best) BASIC16.4■□□□□ 0.22
RAB40AQ8WXH6 NAPRT-202ENST00000426292 1654 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
RAB40AQ8WXH6 HOXC11-201ENST00000243082 2039 ntTSL 3 BASIC16.4■□□□□ 0.22
RAB40AQ8WXH6 OCSTAMP-201ENST00000279028 2043 ntAPPRIS P1 TSL 5 BASIC16.4■□□□□ 0.22
RAB40AQ8WXH6 PDZD7-201ENST00000370215 2032 ntTSL 2 BASIC16.4■□□□□ 0.22
RAB40AQ8WXH6 SEMA3C-201ENST00000265361 5174 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
RAB40AQ8WXH6 KTI12-201ENST00000371614 1714 ntAPPRIS P1 BASIC16.4■□□□□ 0.22
RAB40AQ8WXH6 CACNA1B-205ENST00000371363 9758 ntAPPRIS ALT2 TSL 5 BASIC16.4■□□□□ 0.22
RAB40AQ8WXH6 PSMD6-201ENST00000295901 1430 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
RAB40AQ8WXH6 MPV17L2-204ENST00000599612 1408 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
RAB40AQ8WXH6 CXCL3-201ENST00000296026 1075 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
RAB40AQ8WXH6 TSTD1-201ENST00000318289 626 ntAPPRIS P3 TSL 1 (best) BASIC16.4■□□□□ 0.22
RAB40AQ8WXH6 ANG-201ENST00000336811 1222 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
RAB40AQ8WXH6 AC093620.1-201ENST00000342963 583 ntTSL 3 BASIC16.4■□□□□ 0.22
RAB40AQ8WXH6 LYPD1-201ENST00000345008 1033 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
RAB40AQ8WXH6 TREX2-204ENST00000370212 861 ntTSL 5 BASIC16.4■□□□□ 0.22
RAB40AQ8WXH6 TREX2-205ENST00000370231 1255 ntAPPRIS P1 TSL 5 BASIC16.4■□□□□ 0.22
RAB40AQ8WXH6 TREX2-207ENST00000393862 907 ntAPPRIS P1 TSL 2 BASIC16.4■□□□□ 0.22
RAB40AQ8WXH6 ANKRD54-204ENST00000411961 946 ntTSL 5 BASIC16.4■□□□□ 0.22
RAB40AQ8WXH6 STK24-AS1-201ENST00000434547 1278 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
RAB40AQ8WXH6 AC068831.2-201ENST00000448987 367 ntTSL 2 BASIC16.4■□□□□ 0.22
RAB40AQ8WXH6 AC068987.1-201ENST00000562996 427 ntTSL 3 BASIC16.4■□□□□ 0.22
RAB40AQ8WXH6 AL354712.1-201ENST00000563570 477 ntTSL 3 BASIC16.4■□□□□ 0.22
RAB40AQ8WXH6 NOXO1-205ENST00000566005 1144 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
RAB40AQ8WXH6 FXYD1-204ENST00000588081 645 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
RAB40AQ8WXH6 ELAC1-203ENST00000588577 694 ntTSL 2 BASIC16.4■□□□□ 0.22
RAB40AQ8WXH6 CABP2-204ENST00000636477 941 ntTSL 5 BASIC16.4■□□□□ 0.22
RAB40AQ8WXH6 AC008764.6-201ENST00000595909 2069 ntBASIC16.4■□□□□ 0.22
RAB40AQ8WXH6 LEMD2-214ENST00000614475 2883 ntAPPRIS P1 TSL 5 BASIC16.4■□□□□ 0.22
RAB40AQ8WXH6 CD276-201ENST00000318424 2738 ntTSL 5 BASIC16.4■□□□□ 0.22
RAB40AQ8WXH6 PTP4A3-202ENST00000349124 2710 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
RAB40AQ8WXH6 HHATL-201ENST00000310417 1750 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
RAB40AQ8WXH6 TBX18-202ENST00000369663 6245 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
RAB40AQ8WXH6 C20orf27-201ENST00000217195 1302 ntTSL 2 BASIC16.4■□□□□ 0.22
RAB40AQ8WXH6 C19orf84-202ENST00000574814 1318 ntAPPRIS P2 TSL 1 (best) BASIC16.4■□□□□ 0.22
RAB40AQ8WXH6 COPS7A-210ENST00000539735 1832 ntAPPRIS P1 TSL 5 BASIC16.4■□□□□ 0.22
RAB40AQ8WXH6 MYC-205ENST00000524013 2150 ntAPPRIS ALT1 TSL 1 (best) BASIC16.4■□□□□ 0.22
RAB40AQ8WXH6 ADRA1A-205ENST00000380582 2089 ntTSL 1 (best) BASIC16.39■□□□□ 0.21
RAB40AQ8WXH6 SALRNA1-201ENST00000555871 2086 ntTSL 4 BASIC16.39■□□□□ 0.21
RAB40AQ8WXH6 KLC1-217ENST00000554280 2426 ntTSL 5 BASIC16.39■□□□□ 0.21
RAB40AQ8WXH6 SRSF2-202ENST00000359995 1927 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
RAB40AQ8WXH6 DTWD1-202ENST00000403028 1584 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
RAB40AQ8WXH6 AP2M1-203ENST00000411763 1577 ntTSL 5 BASIC16.39■□□□□ 0.21
RAB40AQ8WXH6 TMEM263-204ENST00000548125 3349 ntAPPRIS P1 TSL 2 BASIC16.39■□□□□ 0.21
RAB40AQ8WXH6 SCARB2-201ENST00000264896 4792 ntAPPRIS P2 TSL 1 (best) BASIC16.39■□□□□ 0.21
RAB40AQ8WXH6 CAMKK2-207ENST00000404169 2116 ntAPPRIS P4 TSL 1 (best) BASIC16.39■□□□□ 0.21
RAB40AQ8WXH6 SPART-209ENST00000494062 3018 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
RAB40AQ8WXH6 AL135905.2-201ENST00000584934 1404 ntBASIC16.39■□□□□ 0.21
RAB40AQ8WXH6 ENTPD6-209ENST00000433259 2654 ntTSL 5 BASIC16.39■□□□□ 0.21
RAB40AQ8WXH6 NUAK1-201ENST00000261402 6828 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
RAB40AQ8WXH6 SIKE1-201ENST00000060969 2190 ntAPPRIS P3 TSL 1 (best) BASIC16.39■□□□□ 0.21
RAB40AQ8WXH6 RRAS-201ENST00000246792 1044 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
RAB40AQ8WXH6 METTL27-201ENST00000297873 941 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
RAB40AQ8WXH6 SSNA1-201ENST00000322310 896 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
RAB40AQ8WXH6 AK2-201ENST00000354858 1021 ntAPPRIS P4 TSL 1 (best) BASIC16.39■□□□□ 0.21
RAB40AQ8WXH6 PSMG1-202ENST00000380900 907 ntTSL 1 (best) BASIC16.39■□□□□ 0.21
RAB40AQ8WXH6 DNPH1-202ENST00000393987 796 ntTSL 2 BASIC16.39■□□□□ 0.21
RAB40AQ8WXH6 METTL21A-204ENST00000425132 869 ntTSL 2 BASIC16.39■□□□□ 0.21
RAB40AQ8WXH6 AL590666.2-201ENST00000448869 758 ntTSL 2 BASIC16.39■□□□□ 0.21
RAB40AQ8WXH6 LEF1-AS1-203ENST00000507799 459 ntTSL 3 BASIC16.39■□□□□ 0.21
RAB40AQ8WXH6 TK2-204ENST00000525974 1178 ntTSL 2 BASIC16.39■□□□□ 0.21
RAB40AQ8WXH6 DHRS4-206ENST00000558581 1143 ntTSL 1 (best) BASIC16.39■□□□□ 0.21
RAB40AQ8WXH6 AC027682.2-201ENST00000563083 336 ntTSL 5 BASIC16.39■□□□□ 0.21
Retrieved 100 of 98,524 protein–RNA pairs in 24.4 ms