Protein–RNA interactions for Protein: Q8TD26

CHD6, Chromodomain-helicase-DNA-binding protein 6, humanhuman

Predictions only

Length 2,715 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHD6Q8TD26 SLC13A3-204ENST00000413164 2008 ntTSL 2 BASIC16.74■□□□□ 0.27
CHD6Q8TD26 RGMA-208ENST00000556658 1889 ntTSL 1 (best) BASIC16.74■□□□□ 0.27
CHD6Q8TD26 IGLL1-202ENST00000330377 901 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
CHD6Q8TD26 SFTPD-201ENST00000372292 1281 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
CHD6Q8TD26 DMKN-206ENST00000418261 1257 ntAPPRIS ALT2 TSL 1 (best) BASIC16.74■□□□□ 0.27
CHD6Q8TD26 ACTG1P14-201ENST00000446382 1122 ntBASIC16.74■□□□□ 0.27
CHD6Q8TD26 PTPRG-AS1-205ENST00000475371 733 ntTSL 3 BASIC16.74■□□□□ 0.27
CHD6Q8TD26 ARAP1-AS1-201ENST00000542022 388 ntTSL 5 BASIC16.74■□□□□ 0.27
CHD6Q8TD26 AC034102.5-201ENST00000548731 540 ntTSL 4 BASIC16.74■□□□□ 0.27
CHD6Q8TD26 COX11-202ENST00000571584 1108 ntTSL 2 BASIC16.74■□□□□ 0.27
CHD6Q8TD26 IFT20-214ENST00000585089 1071 ntTSL 1 (best) BASIC16.74■□□□□ 0.27
CHD6Q8TD26 DUSP13-212ENST00000605915 1015 ntTSL 5 BASIC16.74■□□□□ 0.27
CHD6Q8TD26 AC114488.2-214ENST00000609033 813 ntTSL 5 BASIC16.74■□□□□ 0.27
CHD6Q8TD26 INTS4P1-201ENST00000438455 1935 ntBASIC16.74■□□□□ 0.27
CHD6Q8TD26 P4HA3-201ENST00000331597 2274 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
CHD6Q8TD26 RNPEP-202ENST00000367286 2282 ntTSL 5 BASIC16.74■□□□□ 0.27
CHD6Q8TD26 CLDN14-203ENST00000399136 1330 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
CHD6Q8TD26 TMEM25-205ENST00000411589 2442 ntAPPRIS ALT2 TSL 2 BASIC16.74■□□□□ 0.27
CHD6Q8TD26 FYTTD1-205ENST00000424384 1758 ntTSL 2 BASIC16.74■□□□□ 0.27
CHD6Q8TD26 AC005906.2-202ENST00000638821 2168 ntTSL 5 BASIC16.74■□□□□ 0.27
CHD6Q8TD26 COX5BP8-201ENST00000416911 349 ntBASIC16.74■□□□□ 0.27
CHD6Q8TD26 FAM86GP-201ENST00000448322 971 ntBASIC16.74■□□□□ 0.27
CHD6Q8TD26 SPATA8-AS1-201ENST00000558722 465 ntTSL 3 BASIC16.74■□□□□ 0.27
CHD6Q8TD26 C19orf25-210ENST00000591027 574 ntTSL 4 BASIC16.74■□□□□ 0.27
CHD6Q8TD26 AC022145.2-201ENST00000598203 171 ntBASIC16.74■□□□□ 0.27
CHD6Q8TD26 GRIFIN-202ENST00000614228 461 ntAPPRIS P1 TSL 5 BASIC16.74■□□□□ 0.27
CHD6Q8TD26 MIR6805-201ENST00000615055 62 ntBASIC16.74■□□□□ 0.27
CHD6Q8TD26 NEK2-205ENST00000540251 1318 ntTSL 1 (best) BASIC16.74■□□□□ 0.27
CHD6Q8TD26 ASRGL1-202ENST00000415229 2270 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
CHD6Q8TD26 RHOV-201ENST00000220507 1705 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
CHD6Q8TD26 RABEP2-201ENST00000357573 2175 ntTSL 1 (best) BASIC16.73■□□□□ 0.27
CHD6Q8TD26 PCDH1-204ENST00000503492 2373 ntTSL 5 BASIC16.73■□□□□ 0.27
CHD6Q8TD26 CPE-201ENST00000402744 2421 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
CHD6Q8TD26 AL365232.1-201ENST00000423730 1636 ntAPPRIS P1 TSL 5 BASIC16.73■□□□□ 0.27
CHD6Q8TD26 TMEM59-202ENST00000371337 600 ntTSL 2 BASIC16.73■□□□□ 0.27
CHD6Q8TD26 CNEP1R1-202ENST00000427478 2117 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
CHD6Q8TD26 RBAKDN-201ENST00000498308 514 ntTSL 1 (best) BASIC16.73■□□□□ 0.27
CHD6Q8TD26 NKAPP1-205ENST00000585790 367 ntBASIC16.73■□□□□ 0.27
CHD6Q8TD26 FSTL3-202ENST00000588773 746 ntTSL 2 BASIC16.73■□□□□ 0.27
CHD6Q8TD26 CXorf49-202ENST00000535490 1715 ntAPPRIS P1 TSL 5 BASIC16.73■□□□□ 0.27
CHD6Q8TD26 CXorf49B-202ENST00000542739 1715 ntAPPRIS P1 TSL 5 BASIC16.73■□□□□ 0.27
CHD6Q8TD26 ESAM-201ENST00000278927 1826 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
CHD6Q8TD26 CDK4-202ENST00000312990 1650 ntTSL 1 (best) BASIC16.73■□□□□ 0.27
CHD6Q8TD26 IKZF1-209ENST00000438033 1748 ntTSL 2 BASIC16.73■□□□□ 0.27
CHD6Q8TD26 NPM1-201ENST00000296930 1758 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
CHD6Q8TD26 ALG5-201ENST00000239891 1154 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
CHD6Q8TD26 GPX7-201ENST00000361314 1228 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
CHD6Q8TD26 ELK2AP-201ENST00000392510 1007 ntBASIC16.73■□□□□ 0.27
CHD6Q8TD26 IFT20-203ENST00000395418 825 ntAPPRIS P4 TSL 1 (best) BASIC16.73■□□□□ 0.27
CHD6Q8TD26 U91328.1-201ENST00000437528 223 ntBASIC16.73■□□□□ 0.27
CHD6Q8TD26 RPSAP31-202ENST00000445165 716 ntTSL 2 BASIC16.73■□□□□ 0.27
CHD6Q8TD26 BX890604.1-208ENST00000490920 726 ntTSL 2 BASIC16.73■□□□□ 0.27
CHD6Q8TD26 IFT20-216ENST00000588477 774 ntTSL 5 BASIC16.73■□□□□ 0.27
CHD6Q8TD26 ADAP1-218ENST00000617043 1946 ntTSL 2 BASIC16.73■□□□□ 0.27
CHD6Q8TD26 SHD-201ENST00000543264 2577 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
CHD6Q8TD26 BCS1L-210ENST00000431802 2015 ntAPPRIS P1 TSL 2 BASIC16.72■□□□□ 0.27
CHD6Q8TD26 C6orf141-206ENST00000529246 1450 ntAPPRIS P1 BASIC16.72■□□□□ 0.27
CHD6Q8TD26 FASTK-201ENST00000297532 1827 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
CHD6Q8TD26 TUSC3-204ENST00000506802 1546 ntTSL 5 BASIC16.72■□□□□ 0.27
CHD6Q8TD26 TMSB15B-202ENST00000436583 2186 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
CHD6Q8TD26 NMRK2-201ENST00000168977 1126 ntAPPRIS P3 TSL 2 BASIC16.72■□□□□ 0.27
CHD6Q8TD26 AL022341.1-201ENST00000455294 389 ntTSL 2 BASIC16.72■□□□□ 0.27
CHD6Q8TD26 EEF1D-207ENST00000524624 1084 ntAPPRIS ALT2 TSL 5 BASIC16.72■□□□□ 0.27
CHD6Q8TD26 MIR4525-201ENST00000580000 75 ntBASIC16.72■□□□□ 0.27
CHD6Q8TD26 NMRK2-205ENST00000616156 1139 ntAPPRIS ALT2 TSL 5 BASIC16.72■□□□□ 0.27
CHD6Q8TD26 MMD-201ENST00000262065 2735 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
CHD6Q8TD26 AC125634.1-201ENST00000438758 1403 ntBASIC16.72■□□□□ 0.27
CHD6Q8TD26 TRIM67-203ENST00000449018 2166 ntTSL 1 (best) BASIC16.72■□□□□ 0.27
CHD6Q8TD26 CAPN10-208ENST00000404753 2570 ntAPPRIS ALT2 TSL 5 BASIC16.72■□□□□ 0.27
CHD6Q8TD26 RAB7A-203ENST00000482525 1589 ntTSL 1 (best) BASIC16.72■□□□□ 0.27
CHD6Q8TD26 CTBP1-203ENST00000382952 2467 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
CHD6Q8TD26 PIP5KL1-201ENST00000300432 1104 ntTSL 1 (best) BASIC16.72■□□□□ 0.27
CHD6Q8TD26 POP7-201ENST00000303151 927 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
CHD6Q8TD26 TMEM52-201ENST00000310991 929 ntAPPRIS P2 TSL 1 (best) BASIC16.72■□□□□ 0.27
CHD6Q8TD26 GPR53P-205ENST00000457298 1084 ntBASIC16.72■□□□□ 0.27
CHD6Q8TD26 SMIM4-202ENST00000476842 522 ntTSL 4 BASIC16.72■□□□□ 0.27
CHD6Q8TD26 AC138474.1-201ENST00000586630 523 ntTSL 3 BASIC16.72■□□□□ 0.27
CHD6Q8TD26 AC004835.2-201ENST00000603762 682 ntBASIC16.72■□□□□ 0.27
CHD6Q8TD26 NSL1-203ENST00000366978 1344 ntTSL 2 BASIC16.72■□□□□ 0.27
CHD6Q8TD26 DNAJC28-203ENST00000402202 1480 ntAPPRIS P1 TSL 5 BASIC16.72■□□□□ 0.27
CHD6Q8TD26 DTX3-201ENST00000337737 2029 ntAPPRIS P3 TSL 2 BASIC16.72■□□□□ 0.27
CHD6Q8TD26 NDUFAF2-201ENST00000296597 719 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
CHD6Q8TD26 MCFD2-205ENST00000409218 648 ntAPPRIS P1 TSL 2 BASIC16.71■□□□□ 0.27
CHD6Q8TD26 HCG4B-203ENST00000450128 991 ntBASIC16.71■□□□□ 0.27
CHD6Q8TD26 FAM25G-201ENST00000452267 345 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
CHD6Q8TD26 ETFA-208ENST00000559602 792 ntTSL 3 BASIC16.71■□□□□ 0.27
CHD6Q8TD26 AC244517.5-205ENST00000623615 575 ntTSL 4 BASIC16.71■□□□□ 0.27
CHD6Q8TD26 CEBPB-201ENST00000303004 1956 ntAPPRIS P1 BASIC16.71■□□□□ 0.27
CHD6Q8TD26 PRR14-202ENST00000300835 2198 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
CHD6Q8TD26 RABEPK-202ENST00000373538 1504 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
CHD6Q8TD26 CPNE2-202ENST00000535318 2316 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
CHD6Q8TD26 TMEM17-201ENST00000335390 1797 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
CHD6Q8TD26 PRKCD-202ENST00000394729 2810 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
CHD6Q8TD26 PCSK6-216ENST00000615296 2921 ntTSL 5 BASIC16.71■□□□□ 0.27
CHD6Q8TD26 MAP3K3-210ENST00000584573 2480 ntTSL 1 (best) BASIC16.71■□□□□ 0.27
CHD6Q8TD26 CKS1B-202ENST00000368436 820 ntTSL 2 BASIC16.71■□□□□ 0.27
CHD6Q8TD26 PTGES3-204ENST00000448157 1017 ntTSL 2 BASIC16.71■□□□□ 0.27
CHD6Q8TD26 AC023141.5-201ENST00000458585 616 ntBASIC16.71■□□□□ 0.27
CHD6Q8TD26 NME2-206ENST00000513177 692 ntAPPRIS P1 TSL 2 BASIC16.71■□□□□ 0.27
CHD6Q8TD26 CYBA-210ENST00000569359 1415 ntTSL 1 (best) BASIC16.71■□□□□ 0.27
Retrieved 100 of 98,524 protein–RNA pairs in 35.7 ms