Protein–RNA interactions for Protein: Q8NDH2

CCDC168, Coiled-coil domain-containing protein 168, humanhuman

Predictions only

Length 2,452 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC168Q8NDH2 AC020558.1-201ENST00000583662 425 ntTSL 3 BASIC15.54■□□□□ 0.08
CCDC168Q8NDH2 GZMM-202ENST00000592501 941 ntTSL 3 BASIC15.54■□□□□ 0.08
CCDC168Q8NDH2 AC012645.4-201ENST00000610691 1061 ntBASIC15.54■□□□□ 0.08
CCDC168Q8NDH2 ADORA1-208ENST00000618295 862 ntTSL 1 (best) BASIC15.54■□□□□ 0.08
CCDC168Q8NDH2 SNX32-201ENST00000308342 2003 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
CCDC168Q8NDH2 ASMTL-202ENST00000381333 2035 ntAPPRIS ALT2 TSL 2 BASIC15.54■□□□□ 0.08
CCDC168Q8NDH2 HTRA3-202ENST00000382512 2023 ntTSL 1 (best) BASIC15.54■□□□□ 0.08
CCDC168Q8NDH2 ASCL5-201ENST00000449188 2026 ntAPPRIS P1 TSL 3 BASIC15.54■□□□□ 0.08
CCDC168Q8NDH2 TMEM62-201ENST00000260403 2771 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
CCDC168Q8NDH2 KCNC3-201ENST00000376959 5447 ntAPPRIS ALT2 TSL 5 BASIC15.53■□□□□ 0.08
CCDC168Q8NDH2 MIR770-201ENST00000390219 98 ntBASIC15.53■□□□□ 0.08
CCDC168Q8NDH2 UPK3A-202ENST00000396082 627 ntAPPRIS ALT2 TSL 1 (best) BASIC15.53■□□□□ 0.08
CCDC168Q8NDH2 RPS2P1-201ENST00000434010 821 ntBASIC15.53■□□□□ 0.08
CCDC168Q8NDH2 AC005020.2-201ENST00000455905 830 ntAPPRIS P1 TSL 3 BASIC15.53■□□□□ 0.08
CCDC168Q8NDH2 LINC00882-201ENST00000473636 710 ntTSL 3 BASIC15.53■□□□□ 0.08
CCDC168Q8NDH2 CFL1-202ENST00000524553 860 ntTSL 2 BASIC15.53■□□□□ 0.08
CCDC168Q8NDH2 CYB561D1-208ENST00000528785 1271 ntAPPRIS ALT1 TSL 5 BASIC15.53■□□□□ 0.08
CCDC168Q8NDH2 CYB561D1-209ENST00000533024 913 ntTSL 2 BASIC15.53■□□□□ 0.08
CCDC168Q8NDH2 LINC01956-202ENST00000584273 612 ntTSL 3 BASIC15.53■□□□□ 0.08
CCDC168Q8NDH2 ANKMY2-206ENST00000628652 1270 ntTSL 5 BASIC15.53■□□□□ 0.08
CCDC168Q8NDH2 IL11RA-201ENST00000318041 1728 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
CCDC168Q8NDH2 ESYT3-201ENST00000289135 1356 ntTSL 5 BASIC15.53■□□□□ 0.08
CCDC168Q8NDH2 FOXP3-206ENST00000557224 1371 ntTSL 2 BASIC15.53■□□□□ 0.08
CCDC168Q8NDH2 TEAD4-201ENST00000358409 1637 ntTSL 1 (best) BASIC15.53■□□□□ 0.08
CCDC168Q8NDH2 FDFT1-210ENST00000525954 1890 ntTSL 2 BASIC15.53■□□□□ 0.08
CCDC168Q8NDH2 FAM212B-203ENST00000444059 1423 ntTSL 1 (best) BASIC15.53■□□□□ 0.08
CCDC168Q8NDH2 AC012615.6-201ENST00000593201 1697 ntTSL 2 BASIC15.53■□□□□ 0.08
CCDC168Q8NDH2 ZNF821-202ENST00000425432 2000 ntAPPRIS P1 TSL 5 BASIC15.53■□□□□ 0.08
CCDC168Q8NDH2 HIST1H2BL-201ENST00000377401 488 ntAPPRIS P1 BASIC15.53■□□□□ 0.08
CCDC168Q8NDH2 UBE2F-202ENST00000409332 1138 ntTSL 5 BASIC15.53■□□□□ 0.08
CCDC168Q8NDH2 TMEM213-202ENST00000413208 480 ntAPPRIS ALT2 TSL 3 BASIC15.53■□□□□ 0.08
CCDC168Q8NDH2 AL162231.1-204ENST00000423809 477 ntAPPRIS ALT2 TSL 3 BASIC15.53■□□□□ 0.08
CCDC168Q8NDH2 AL645939.2-201ENST00000427340 991 ntBASIC15.53■□□□□ 0.08
CCDC168Q8NDH2 AFG3L1P-209ENST00000429663 458 ntTSL 3 BASIC15.53■□□□□ 0.08
CCDC168Q8NDH2 AC092159.3-201ENST00000439196 571 ntTSL 4 BASIC15.53■□□□□ 0.08
CCDC168Q8NDH2 AC025183.1-201ENST00000506335 425 ntTSL 4 BASIC15.53■□□□□ 0.08
CCDC168Q8NDH2 AL137786.1-202ENST00000555496 789 ntTSL 5 BASIC15.53■□□□□ 0.08
CCDC168Q8NDH2 DET1-207ENST00000564406 2315 ntTSL 2 BASIC15.53■□□□□ 0.08
CCDC168Q8NDH2 TH-203ENST00000352909 1889 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
CCDC168Q8NDH2 ACHE-207ENST00000428317 2159 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
CCDC168Q8NDH2 PDZD3-201ENST00000322712 2204 ntTSL 1 (best) BASIC15.52■□□□□ 0.08
CCDC168Q8NDH2 MATN4-201ENST00000353917 1657 ntTSL 5 BASIC15.52■□□□□ 0.08
CCDC168Q8NDH2 FSTL3-201ENST00000166139 2542 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.08
CCDC168Q8NDH2 TMEM91-209ENST00000539627 1843 ntTSL 1 (best) BASIC15.52■□□□□ 0.08
CCDC168Q8NDH2 PSPH-202ENST00000395471 2178 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.08
CCDC168Q8NDH2 CD320-201ENST00000301458 1250 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.08
CCDC168Q8NDH2 DPM3-203ENST00000368400 409 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.08
CCDC168Q8NDH2 CDC26-201ENST00000374206 872 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.08
CCDC168Q8NDH2 AC105202.1-202ENST00000522060 834 ntTSL 3 BASIC15.52■□□□□ 0.08
CCDC168Q8NDH2 FLJ20021-201ENST00000527564 790 ntTSL 2 BASIC15.52■□□□□ 0.08
CCDC168Q8NDH2 AC009533.2-201ENST00000543664 586 ntBASIC15.52■□□□□ 0.08
CCDC168Q8NDH2 C17orf49-203ENST00000546760 764 ntTSL 5 BASIC15.52■□□□□ 0.08
CCDC168Q8NDH2 GREM1-201ENST00000560677 623 ntTSL 4 BASIC15.52■□□□□ 0.08
CCDC168Q8NDH2 ADAM22-209ENST00000439864 2576 ntTSL 1 (best) BASIC15.52■□□□□ 0.08
CCDC168Q8NDH2 FMNL2-201ENST00000288670 5575 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.08
CCDC168Q8NDH2 TMEM216-201ENST00000334888 1306 ntAPPRIS ALT2 TSL 2 BASIC15.52■□□□□ 0.08
CCDC168Q8NDH2 LRRC42-203ENST00000371370 2037 ntAPPRIS P1 TSL 2 BASIC15.52■□□□□ 0.08
CCDC168Q8NDH2 INSM1-201ENST00000310227 2829 ntAPPRIS P1 BASIC15.52■□□□□ 0.07
CCDC168Q8NDH2 ARHGAP8-201ENST00000336963 1487 ntTSL 1 (best) BASIC15.52■□□□□ 0.07
CCDC168Q8NDH2 GMPPA-213ENST00000622191 1473 ntTSL 5 BASIC15.52■□□□□ 0.07
CCDC168Q8NDH2 C18orf32-201ENST00000318240 1128 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.07
CCDC168Q8NDH2 BRCC3-202ENST00000340647 1101 ntAPPRIS P2 TSL 2 BASIC15.52■□□□□ 0.07
CCDC168Q8NDH2 SFT2D1-201ENST00000361731 1079 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.07
CCDC168Q8NDH2 SYS1-203ENST00000414310 795 ntTSL 3 BASIC15.52■□□□□ 0.07
CCDC168Q8NDH2 WDR53-203ENST00000429115 683 ntTSL 2 BASIC15.52■□□□□ 0.07
CCDC168Q8NDH2 PNKD-204ENST00000436005 978 ntTSL 5 BASIC15.52■□□□□ 0.07
CCDC168Q8NDH2 PXN-AS1-201ENST00000535200 1170 ntTSL 2 BASIC15.52■□□□□ 0.07
CCDC168Q8NDH2 TSFM-208ENST00000543727 651 ntTSL 1 (best) BASIC15.52■□□□□ 0.07
CCDC168Q8NDH2 CHRNA5-203ENST00000559554 1051 ntTSL 3 BASIC15.52■□□□□ 0.07
CCDC168Q8NDH2 AC005632.4-201ENST00000613759 431 ntTSL 3 BASIC15.52■□□□□ 0.07
CCDC168Q8NDH2 LAYN-202ENST00000375615 1836 ntAPPRIS ALT2 TSL 1 (best) BASIC15.52■□□□□ 0.07
CCDC168Q8NDH2 ELMOD1-206ENST00000531234 1832 ntTSL 2 BASIC15.52■□□□□ 0.07
CCDC168Q8NDH2 MOB3C-202ENST00000319928 2822 ntAPPRIS P1 TSL 2 BASIC15.51■□□□□ 0.07
CCDC168Q8NDH2 RPRM-201ENST00000325926 1471 ntAPPRIS P1 BASIC15.51■□□□□ 0.07
CCDC168Q8NDH2 MRPL3-202ENST00000425847 1457 ntTSL 2 BASIC15.51■□□□□ 0.07
CCDC168Q8NDH2 C17orf58-204ENST00000580729 2065 ntTSL 5 BASIC15.51■□□□□ 0.07
CCDC168Q8NDH2 P4HB-201ENST00000331483 2603 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
CCDC168Q8NDH2 BCR-202ENST00000359540 4708 ntTSL 1 (best) BASIC15.51■□□□□ 0.07
CCDC168Q8NDH2 PRRT1-202ENST00000375150 1726 ntTSL 1 (best) BASIC15.51■□□□□ 0.07
CCDC168Q8NDH2 PHF19-201ENST00000312189 836 ntTSL 1 (best) BASIC15.51■□□□□ 0.07
CCDC168Q8NDH2 C1QC-201ENST00000374637 1089 ntAPPRIS P1 TSL 3 BASIC15.51■□□□□ 0.07
CCDC168Q8NDH2 RNA5SP416-201ENST00000516838 111 ntBASIC15.51■□□□□ 0.07
CCDC168Q8NDH2 AL390334.1-205ENST00000555797 411 ntTSL 3 BASIC15.51■□□□□ 0.07
CCDC168Q8NDH2 AC021087.4-201ENST00000563761 564 ntBASIC15.51■□□□□ 0.07
CCDC168Q8NDH2 SNHG9-202ENST00000564014 471 ntBASIC15.51■□□□□ 0.07
CCDC168Q8NDH2 GRAMD1A-201ENST00000317991 2695 ntAPPRIS P3 TSL 1 (best) BASIC15.51■□□□□ 0.07
CCDC168Q8NDH2 TNFAIP8L3-202ENST00000637513 2002 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
CCDC168Q8NDH2 PLCB2-204ENST00000557821 4517 ntAPPRIS ALT1 TSL 1 (best) BASIC15.51■□□□□ 0.07
CCDC168Q8NDH2 ESRRA-202ENST00000405666 2283 ntAPPRIS P3 TSL 1 (best) BASIC15.51■□□□□ 0.07
CCDC168Q8NDH2 DNAAF3-202ENST00000455045 2318 ntAPPRIS ALT2 TSL 1 (best) BASIC15.51■□□□□ 0.07
CCDC168Q8NDH2 DGKZ-214ENST00000527911 3337 ntAPPRIS ALT2 TSL 1 (best) BASIC15.51■□□□□ 0.07
CCDC168Q8NDH2 TOX2-205ENST00000423191 1709 ntTSL 2 BASIC15.51■□□□□ 0.07
CCDC168Q8NDH2 NTN5-201ENST00000270235 1836 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
CCDC168Q8NDH2 TCP11-209ENST00000444780 1841 ntAPPRIS ALT2 TSL 2 BASIC15.51■□□□□ 0.07
CCDC168Q8NDH2 SSX2IP-210ENST00000605755 1933 ntTSL 2 BASIC15.51■□□□□ 0.07
CCDC168Q8NDH2 ACHE-203ENST00000411582 2179 ntTSL 1 (best) BASIC15.51■□□□□ 0.07
CCDC168Q8NDH2 FAM99B-201ENST00000382166 1067 ntTSL 5 BASIC15.51■□□□□ 0.07
CCDC168Q8NDH2 ATP5G3-202ENST00000392541 842 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
CCDC168Q8NDH2 PMEPA1-204ENST00000395814 800 ntTSL 3 BASIC15.51■□□□□ 0.07
CCDC168Q8NDH2 TPD52L1-211ENST00000532429 1022 ntTSL 2 BASIC15.51■□□□□ 0.07
Retrieved 100 of 98,524 protein–RNA pairs in 28.7 ms