Protein–RNA interactions for Protein: Q8IZU3

SYCP3, Synaptonemal complex protein 3, humanhuman

Predictions only

Length 236 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SYCP3Q8IZU3 AL357033.4-201ENST00000617703 1807 ntBASIC20.57■□□□□ 0.88
SYCP3Q8IZU3 SETMAR-206ENST00000430981 1671 ntTSL 1 (best) BASIC20.57■□□□□ 0.88
SYCP3Q8IZU3 TNFRSF8-202ENST00000413146 2363 ntTSL 1 (best) BASIC20.57■□□□□ 0.88
SYCP3Q8IZU3 AHCYL2-201ENST00000325006 5056 ntAPPRIS P3 TSL 1 (best) BASIC20.57■□□□□ 0.88
SYCP3Q8IZU3 ACHE-205ENST00000419336 1906 ntTSL 1 (best) BASIC20.57■□□□□ 0.88
SYCP3Q8IZU3 STRBP-201ENST00000348403 3337 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
SYCP3Q8IZU3 TAF4B-201ENST00000269142 5260 ntAPPRIS P3 TSL 1 (best) BASIC20.56■□□□□ 0.88
SYCP3Q8IZU3 SHE-201ENST00000304760 6243 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
SYCP3Q8IZU3 ENOPH1-201ENST00000273920 2025 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
SYCP3Q8IZU3 PRR5-ARHGAP8-201ENST00000352766 2043 ntAPPRIS P1 TSL 2 BASIC20.56■□□□□ 0.88
SYCP3Q8IZU3 CABP7-201ENST00000216144 3259 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
SYCP3Q8IZU3 GCDH-216ENST00000591470 1867 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
SYCP3Q8IZU3 ANO7L1-203ENST00000602586 1720 ntBASIC20.56■□□□□ 0.88
SYCP3Q8IZU3 TRPM2-202ENST00000300482 5989 ntAPPRIS P3 TSL 1 (best) BASIC20.56■□□□□ 0.88
SYCP3Q8IZU3 HSCB-201ENST00000216027 1114 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
SYCP3Q8IZU3 ZNF534-203ENST00000432303 956 ntTSL 2 BASIC20.56■□□□□ 0.88
SYCP3Q8IZU3 RNF144A-AS1-204ENST00000437589 618 ntTSL 2 BASIC20.56■□□□□ 0.88
SYCP3Q8IZU3 UNC5B-AS1-201ENST00000447119 647 ntTSL 2 BASIC20.56■□□□□ 0.88
SYCP3Q8IZU3 GXYLT1P6-201ENST00000456472 1187 ntBASIC20.56■□□□□ 0.88
SYCP3Q8IZU3 TMA16-209ENST00000513272 803 ntTSL 2 BASIC20.56■□□□□ 0.88
SYCP3Q8IZU3 LY6E-211ENST00000521699 1256 ntAPPRIS P2 TSL 5 BASIC20.56■□□□□ 0.88
SYCP3Q8IZU3 AC015712.4-203ENST00000559673 630 ntTSL 3 BASIC20.56■□□□□ 0.88
SYCP3Q8IZU3 PHOSPHO2-206ENST00000616481 1252 ntAPPRIS P1 TSL 3 BASIC20.56■□□□□ 0.88
SYCP3Q8IZU3 PHOSPHO2-208ENST00000617738 1053 ntAPPRIS P1 TSL 2 BASIC20.56■□□□□ 0.88
SYCP3Q8IZU3 FNBP1-202ENST00000420781 5410 ntAPPRIS ALT1 TSL 1 (best) BASIC20.56■□□□□ 0.88
SYCP3Q8IZU3 TEPSIN-201ENST00000300714 2287 ntAPPRIS P2 TSL 1 (best) BASIC20.56■□□□□ 0.88
SYCP3Q8IZU3 CD164L2-202ENST00000374027 1457 ntAPPRIS P3 TSL 1 (best) BASIC20.56■□□□□ 0.88
SYCP3Q8IZU3 CERS5-203ENST00000422340 2855 ntAPPRIS ALT2 TSL 2 BASIC20.56■□□□□ 0.88
SYCP3Q8IZU3 DDX42-216ENST00000583590 4148 ntAPPRIS P1 TSL 5 BASIC20.55■□□□□ 0.88
SYCP3Q8IZU3 TULP1-208ENST00000614066 2084 ntAPPRIS ALT2 TSL 5 BASIC20.55■□□□□ 0.88
SYCP3Q8IZU3 TYMS-203ENST00000323274 1662 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
SYCP3Q8IZU3 MEN1-201ENST00000312049 2761 ntAPPRIS ALT1 TSL 1 (best) BASIC20.55■□□□□ 0.88
SYCP3Q8IZU3 PTPA-204ENST00000355007 2515 ntTSL 5 BASIC20.55■□□□□ 0.88
SYCP3Q8IZU3 CPXM2-204ENST00000615851 2512 ntTSL 5 BASIC20.55■□□□□ 0.88
SYCP3Q8IZU3 PPHLN1-213ENST00000549190 1777 ntTSL 5 BASIC20.55■□□□□ 0.88
SYCP3Q8IZU3 ECEL1-201ENST00000304546 2865 ntAPPRIS P3 TSL 1 (best) BASIC20.55■□□□□ 0.88
SYCP3Q8IZU3 SOWAHC-201ENST00000356454 4657 ntAPPRIS P1 BASIC20.55■□□□□ 0.88
SYCP3Q8IZU3 CKS1B-203ENST00000368439 912 ntTSL 1 (best) BASIC20.55■□□□□ 0.88
SYCP3Q8IZU3 UQCRQ-201ENST00000378665 586 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
SYCP3Q8IZU3 SDCBP-204ENST00000447182 2103 ntAPPRIS ALT1 TSL 1 (best) BASIC20.55■□□□□ 0.88
SYCP3Q8IZU3 YKT6-207ENST00000496112 1270 ntTSL 2 BASIC20.55■□□□□ 0.88
SYCP3Q8IZU3 DNAJC28-201ENST00000314399 1625 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
SYCP3Q8IZU3 ZNF655-202ENST00000320583 1601 ntTSL 1 (best) BASIC20.55■□□□□ 0.88
SYCP3Q8IZU3 KCNK4-205ENST00000538767 1389 ntTSL 2 BASIC20.55■□□□□ 0.88
SYCP3Q8IZU3 ADCY9-201ENST00000294016 7725 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
SYCP3Q8IZU3 SPAG9-202ENST00000357122 4761 ntAPPRIS P2 TSL 1 (best) BASIC20.55■□□□□ 0.88
SYCP3Q8IZU3 IRF7-202ENST00000348655 1801 ntAPPRIS ALT2 TSL 1 (best) BASIC20.55■□□□□ 0.88
SYCP3Q8IZU3 ZNF302-214ENST00000613363 2893 ntAPPRIS ALT2 TSL 4 BASIC20.55■□□□□ 0.88
SYCP3Q8IZU3 AC036111.1-201ENST00000533973 1582 ntBASIC20.55■□□□□ 0.88
SYCP3Q8IZU3 ETS1-208ENST00000535549 4594 ntTSL 1 (best) BASIC20.54■□□□□ 0.88
SYCP3Q8IZU3 FLT1-201ENST00000282397 7092 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
SYCP3Q8IZU3 PPP2R5A-201ENST00000261461 3128 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
SYCP3Q8IZU3 CHRM4-201ENST00000433765 1511 ntAPPRIS P1 BASIC20.54■□□□□ 0.88
SYCP3Q8IZU3 PRODH-215ENST00000610940 2405 ntAPPRIS P3 TSL 1 (best) BASIC20.54■□□□□ 0.88
SYCP3Q8IZU3 SLC6A9-201ENST00000357730 2168 ntTSL 1 (best) BASIC20.54■□□□□ 0.88
SYCP3Q8IZU3 CLN3-204ENST00000357857 1720 ntTSL 2 BASIC20.54■□□□□ 0.88
SYCP3Q8IZU3 DHRS4L2-202ENST00000397071 1117 ntTSL 2 BASIC20.54■□□□□ 0.88
SYCP3Q8IZU3 TMUB1-205ENST00000482202 899 ntAPPRIS P1 TSL 3 BASIC20.54■□□□□ 0.88
SYCP3Q8IZU3 MIR3180-5-201ENST00000583743 153 ntBASIC20.54■□□□□ 0.88
SYCP3Q8IZU3 AC145285.6-201ENST00000604632 637 ntBASIC20.54■□□□□ 0.88
SYCP3Q8IZU3 AC008735.6-201ENST00000635964 1292 ntAPPRIS P1 TSL 2 BASIC20.54■□□□□ 0.88
SYCP3Q8IZU3 AL590627.2-201ENST00000637510 144 ntTSL 5 BASIC20.54■□□□□ 0.88
SYCP3Q8IZU3 TMEM129-202ENST00000382936 2810 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
SYCP3Q8IZU3 CHTOP-207ENST00000614256 1840 ntTSL 3 BASIC20.54■□□□□ 0.88
SYCP3Q8IZU3 ARID1B-203ENST00000350026 7962 ntAPPRIS P3 TSL 1 (best) BASIC20.54■□□□□ 0.88
SYCP3Q8IZU3 ZKSCAN7-205ENST00000426540 2791 ntAPPRIS P1 TSL 2 BASIC20.54■□□□□ 0.88
SYCP3Q8IZU3 FADS1-204ENST00000433932 1690 ntTSL 2 BASIC20.54■□□□□ 0.88
SYCP3Q8IZU3 NRN1-204ENST00000622188 1795 ntTSL 2 BASIC20.54■□□□□ 0.88
SYCP3Q8IZU3 SLC38A10-201ENST00000288439 2708 ntAPPRIS P3 TSL 1 (best) BASIC20.54■□□□□ 0.88
SYCP3Q8IZU3 GLYCTK-202ENST00000436784 1982 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
SYCP3Q8IZU3 CYSTM1-201ENST00000261811 1336 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
SYCP3Q8IZU3 SLC29A2-201ENST00000311161 2262 ntTSL 1 (best) BASIC20.53■□□□□ 0.88
SYCP3Q8IZU3 PTN-201ENST00000348225 1614 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
SYCP3Q8IZU3 RASSF1-210ENST00000616212 1842 ntTSL 2 BASIC20.53■□□□□ 0.88
SYCP3Q8IZU3 ZNF12-204ENST00000405858 5051 ntAPPRIS P4 TSL 1 (best) BASIC20.53■□□□□ 0.88
SYCP3Q8IZU3 VKORC1-202ENST00000319788 1077 ntTSL 1 (best) BASIC20.53■□□□□ 0.88
SYCP3Q8IZU3 LRRC23-202ENST00000323702 1208 ntAPPRIS ALT2 TSL 1 (best) BASIC20.53■□□□□ 0.88
SYCP3Q8IZU3 MUC1-211ENST00000438413 927 ntTSL 1 (best) BASIC20.53■□□□□ 0.88
SYCP3Q8IZU3 PHB2-202ENST00000440277 996 ntTSL 5 BASIC20.53■□□□□ 0.88
SYCP3Q8IZU3 KCTD7-202ENST00000443322 1160 ntAPPRIS ALT1 TSL 1 (best) BASIC20.53■□□□□ 0.88
SYCP3Q8IZU3 BNIP3L-204ENST00000520409 739 ntTSL 2 BASIC20.53■□□□□ 0.88
SYCP3Q8IZU3 AP006621.4-201ENST00000527021 532 ntTSL 5 BASIC20.53■□□□□ 0.88
SYCP3Q8IZU3 CBLN1-202ENST00000536749 718 ntAPPRIS P1 TSL 5 BASIC20.53■□□□□ 0.88
SYCP3Q8IZU3 TMEM249-203ENST00000565365 975 ntAPPRIS P2 TSL 3 BASIC20.53■□□□□ 0.88
SYCP3Q8IZU3 AL929554.1-201ENST00000568665 460 ntAPPRIS P1 TSL 3 BASIC20.53■□□□□ 0.88
SYCP3Q8IZU3 FAM87A-204ENST00000613235 858 ntBASIC20.53■□□□□ 0.88
SYCP3Q8IZU3 CDK4-202ENST00000312990 1650 ntTSL 1 (best) BASIC20.53■□□□□ 0.88
SYCP3Q8IZU3 SEPT9-246ENST00000592951 1793 ntAPPRIS ALT2 TSL 2 BASIC20.53■□□□□ 0.88
SYCP3Q8IZU3 FIP1L1-202ENST00000337488 2198 ntTSL 1 (best) BASIC20.53■□□□□ 0.88
SYCP3Q8IZU3 FIP1L1-203ENST00000358575 2180 ntAPPRIS P4 TSL 2 BASIC20.53■□□□□ 0.88
SYCP3Q8IZU3 SLC39A4-201ENST00000276833 2297 ntTSL 2 BASIC20.53■□□□□ 0.88
SYCP3Q8IZU3 THOP1-201ENST00000307741 4804 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
SYCP3Q8IZU3 COX20-203ENST00000411948 2631 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
SYCP3Q8IZU3 EXTL3-201ENST00000220562 6483 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
SYCP3Q8IZU3 ISOC1-201ENST00000173527 1940 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
SYCP3Q8IZU3 CTNNBL1-201ENST00000361383 1925 ntAPPRIS P2 TSL 1 (best) BASIC20.53■□□□□ 0.88
SYCP3Q8IZU3 FARSA-202ENST00000423140 1720 ntTSL 2 BASIC20.53■□□□□ 0.88
SYCP3Q8IZU3 TFCP2-205ENST00000549867 1727 ntTSL 5 BASIC20.53■□□□□ 0.88
SYCP3Q8IZU3 CCK-202ENST00000396169 1527 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
SYCP3Q8IZU3 TYRO3-201ENST00000263798 8207 ntAPPRIS P3 TSL 1 (best) BASIC20.52■□□□□ 0.88
Retrieved 100 of 98,524 protein–RNA pairs in 42.4 ms