Protein–RNA interactions for Protein: Q8IVE0

CROCCP3, Putative ciliary rootlet coiled-coil protein-like 2 protein, humanhuman

Predictions only

Length 287 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CROCCP3Q8IVE0 AC244517.4-202ENST00000624089 484 ntTSL 3 BASIC16.93■□□□□ 0.3
CROCCP3Q8IVE0 ZNF211-201ENST00000240731 2440 ntAPPRIS P4 TSL 2 BASIC16.93■□□□□ 0.3
CROCCP3Q8IVE0 RASD1-202ENST00000579152 1404 ntTSL 2 BASIC16.93■□□□□ 0.3
CROCCP3Q8IVE0 TNK2-AS1-201ENST00000458180 2096 ntTSL 2 BASIC16.93■□□□□ 0.3
CROCCP3Q8IVE0 SPATA20-202ENST00000356488 2634 ntTSL 1 (best) BASIC16.93■□□□□ 0.3
CROCCP3Q8IVE0 LINC01979-201ENST00000576738 5271 ntTSL 1 (best) BASIC16.93■□□□□ 0.3
CROCCP3Q8IVE0 LZTS3-202ENST00000337576 4238 ntAPPRIS P1 TSL 5 BASIC16.93■□□□□ 0.3
CROCCP3Q8IVE0 AC019069.1-201ENST00000610008 1333 ntBASIC16.93■□□□□ 0.3
CROCCP3Q8IVE0 ZNF133-212ENST00000622607 2660 ntAPPRIS ALT2 TSL 4 BASIC16.93■□□□□ 0.3
CROCCP3Q8IVE0 AGXT-201ENST00000307503 1865 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
CROCCP3Q8IVE0 ZGPAT-202ENST00000355969 1871 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
CROCCP3Q8IVE0 ARHGAP11A-201ENST00000361627 5898 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
CROCCP3Q8IVE0 IGFBP1-203ENST00000468955 1369 ntTSL 5 BASIC16.92■□□□□ 0.3
CROCCP3Q8IVE0 GIT2-202ENST00000354574 5387 ntTSL 5 BASIC16.92■□□□□ 0.3
CROCCP3Q8IVE0 MAPK8IP1-202ENST00000395629 3180 ntTSL 5 BASIC16.92■□□□□ 0.3
CROCCP3Q8IVE0 SEMA3B-204ENST00000433753 2755 ntAPPRIS ALT1 TSL 1 (best) BASIC16.92■□□□□ 0.3
CROCCP3Q8IVE0 NRP1-204ENST00000374822 2213 ntTSL 1 (best) BASIC16.92■□□□□ 0.3
CROCCP3Q8IVE0 ACSS2-201ENST00000253382 2925 ntTSL 2 BASIC16.92■□□□□ 0.3
CROCCP3Q8IVE0 RNF2-201ENST00000367509 1677 ntTSL 2 BASIC16.92■□□□□ 0.3
CROCCP3Q8IVE0 REL-202ENST00000394479 2398 ntAPPRIS ALT2 TSL 1 (best) BASIC16.92■□□□□ 0.3
CROCCP3Q8IVE0 NKIRAS1-208ENST00000443659 2391 ntAPPRIS P2 TSL 5 BASIC16.92■□□□□ 0.3
CROCCP3Q8IVE0 PTGER3-208ENST00000370932 1841 ntAPPRIS ALT2 TSL 5 BASIC16.92■□□□□ 0.3
CROCCP3Q8IVE0 TMUB2-204ENST00000538716 1953 ntAPPRIS ALT1 TSL 2 BASIC16.92■□□□□ 0.3
CROCCP3Q8IVE0 GLTPD2-201ENST00000331264 1023 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
CROCCP3Q8IVE0 IFNGR1-201ENST00000367739 2139 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
CROCCP3Q8IVE0 AL731577.2-201ENST00000508096 555 ntTSL 2 BASIC16.92■□□□□ 0.3
CROCCP3Q8IVE0 AC145207.2-202ENST00000576554 565 ntTSL 5 BASIC16.92■□□□□ 0.3
CROCCP3Q8IVE0 AC011511.3-201ENST00000587088 355 ntTSL 2 BASIC16.92■□□□□ 0.3
CROCCP3Q8IVE0 ELANE-202ENST00000590230 1028 ntAPPRIS P1 TSL 5 BASIC16.92■□□□□ 0.3
CROCCP3Q8IVE0 F2RL3-202ENST00000599210 613 ntTSL 2 BASIC16.92■□□□□ 0.3
CROCCP3Q8IVE0 AP2S1-207ENST00000599990 829 ntAPPRIS ALT1 TSL 2 BASIC16.92■□□□□ 0.3
CROCCP3Q8IVE0 MEST-202ENST00000341441 2443 ntAPPRIS ALT1 TSL 1 (best) BASIC16.92■□□□□ 0.3
CROCCP3Q8IVE0 C19orf57-208ENST00000591586 1559 ntAPPRIS ALT2 TSL 5 BASIC16.92■□□□□ 0.3
CROCCP3Q8IVE0 RUNX1-203ENST00000358356 2720 ntTSL 1 (best) BASIC16.92■□□□□ 0.3
CROCCP3Q8IVE0 RASIP1-201ENST00000222145 3308 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
CROCCP3Q8IVE0 HDAC10-222ENST00000626012 2607 ntTSL 5 BASIC16.92■□□□□ 0.3
CROCCP3Q8IVE0 BMP2K-201ENST00000335016 3804 ntAPPRIS ALT2 TSL 5 BASIC16.92■□□□□ 0.3
CROCCP3Q8IVE0 SLC38A11-203ENST00000409149 1621 ntAPPRIS P2 TSL 2 BASIC16.92■□□□□ 0.3
CROCCP3Q8IVE0 AC012414.5-201ENST00000564214 1602 ntTSL 5 BASIC16.92■□□□□ 0.3
CROCCP3Q8IVE0 PCBP4-210ENST00000471622 1784 ntTSL 5 BASIC16.92■□□□□ 0.3
CROCCP3Q8IVE0 PHKA1-205ENST00000541944 5944 ntAPPRIS ALT1 TSL 1 (best) BASIC16.92■□□□□ 0.3
CROCCP3Q8IVE0 EGFR-202ENST00000342916 2239 ntTSL 1 (best) BASIC16.92■□□□□ 0.3
CROCCP3Q8IVE0 TAOK2-203ENST00000416441 4780 ntTSL 1 (best) BASIC16.92■□□□□ 0.3
CROCCP3Q8IVE0 RRAGD-202ENST00000369415 4900 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
CROCCP3Q8IVE0 CASZ1-202ENST00000377022 7936 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
CROCCP3Q8IVE0 CDC25A-201ENST00000302506 3783 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
CROCCP3Q8IVE0 FOXA1-201ENST00000250448 2862 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
CROCCP3Q8IVE0 C16orf45-201ENST00000300006 2404 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
CROCCP3Q8IVE0 P2RX5-203ENST00000547178 1998 ntAPPRIS ALT2 TSL 1 (best) BASIC16.91■□□□□ 0.3
CROCCP3Q8IVE0 MRPL40-201ENST00000333130 1387 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
CROCCP3Q8IVE0 NRXN2-202ENST00000301894 3535 ntTSL 5 BASIC16.91■□□□□ 0.3
CROCCP3Q8IVE0 PLA2G12A-201ENST00000243501 5226 ntAPPRIS P2 TSL 1 (best) BASIC16.91■□□□□ 0.3
CROCCP3Q8IVE0 COL9A1-201ENST00000320755 3059 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
CROCCP3Q8IVE0 TSPAN3-201ENST00000267970 6467 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
CROCCP3Q8IVE0 FBXO33-201ENST00000298097 3853 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
CROCCP3Q8IVE0 PHF1-202ENST00000374516 2330 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
CROCCP3Q8IVE0 ZNF414-202ENST00000393927 2300 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
CROCCP3Q8IVE0 PRELID3A-202ENST00000440960 1716 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
CROCCP3Q8IVE0 PPFIA3-201ENST00000334186 4733 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
CROCCP3Q8IVE0 ETV2-202ENST00000379026 1571 ntAPPRIS ALT2 TSL 2 BASIC16.91■□□□□ 0.3
CROCCP3Q8IVE0 HLA-G-201ENST00000360323 1427 ntAPPRIS P2 BASIC16.91■□□□□ 0.3
CROCCP3Q8IVE0 PHRF1-202ENST00000413872 5224 ntAPPRIS ALT2 TSL 1 (best) BASIC16.91■□□□□ 0.3
CROCCP3Q8IVE0 DMTN-223ENST00000523782 2235 ntAPPRIS P1 TSL 5 BASIC16.91■□□□□ 0.3
CROCCP3Q8IVE0 C5orf38-201ENST00000334000 890 ntAPPRIS P3 TSL 1 (best) BASIC16.91■□□□□ 0.3
CROCCP3Q8IVE0 AC073343.2-201ENST00000413182 548 ntTSL 4 BASIC16.91■□□□□ 0.3
CROCCP3Q8IVE0 AC105001.1-201ENST00000506149 821 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
CROCCP3Q8IVE0 AC090241.2-201ENST00000602329 432 ntTSL 4 BASIC16.91■□□□□ 0.3
CROCCP3Q8IVE0 MED17-201ENST00000251871 5142 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
CROCCP3Q8IVE0 NPFFR2-201ENST00000308744 1922 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
CROCCP3Q8IVE0 RAB22A-201ENST00000244040 8670 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
CROCCP3Q8IVE0 GPR161-202ENST00000367835 2400 ntAPPRIS P1 TSL 2 BASIC16.91■□□□□ 0.3
CROCCP3Q8IVE0 PRDM5-212ENST00000515109 2259 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
CROCCP3Q8IVE0 NOP14-AS1-202ENST00000505731 1999 ntTSL 2 BASIC16.91■□□□□ 0.3
CROCCP3Q8IVE0 APOA5-201ENST00000227665 1897 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
CROCCP3Q8IVE0 LBX2-AS1-201ENST00000548978 1852 ntTSL 3 BASIC16.9■□□□□ 0.3
CROCCP3Q8IVE0 C12orf29-201ENST00000356891 2919 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
CROCCP3Q8IVE0 HLA-DQB1-204ENST00000399084 1734 ntAPPRIS P1 BASIC16.9■□□□□ 0.3
CROCCP3Q8IVE0 EVPL-202ENST00000586740 6223 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
CROCCP3Q8IVE0 TBC1D28-201ENST00000345096 2789 ntAPPRIS P1 TSL 2 BASIC16.9■□□□□ 0.3
CROCCP3Q8IVE0 IL12RB2-201ENST00000262345 4040 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
CROCCP3Q8IVE0 CFP-203ENST00000396992 1592 ntAPPRIS P2 TSL 1 (best) BASIC16.9■□□□□ 0.3
CROCCP3Q8IVE0 DLG4-201ENST00000302955 3184 ntAPPRIS P3 TSL 5 BASIC16.9■□□□□ 0.3
CROCCP3Q8IVE0 DLG4-202ENST00000399506 3185 ntAPPRIS ALT1 TSL 2 BASIC16.9■□□□□ 0.3
CROCCP3Q8IVE0 GAL3ST1-201ENST00000338911 1782 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
CROCCP3Q8IVE0 CCNA1-202ENST00000440264 1758 ntAPPRIS P1 TSL 2 BASIC16.9■□□□□ 0.3
CROCCP3Q8IVE0 GLUD1-201ENST00000277865 3039 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
CROCCP3Q8IVE0 TNFRSF25-203ENST00000351959 1441 ntAPPRIS ALT2 TSL 1 (best) BASIC16.9■□□□□ 0.3
CROCCP3Q8IVE0 EPB41L3-203ENST00000400111 4259 ntTSL 5 BASIC16.9■□□□□ 0.3
CROCCP3Q8IVE0 NEIL2-204ENST00000455213 2323 ntAPPRIS P1 TSL 5 BASIC16.9■□□□□ 0.3
CROCCP3Q8IVE0 CTSL-203ENST00000343150 2177 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
CROCCP3Q8IVE0 SEPT9-237ENST00000591198 2160 ntTSL 2 BASIC16.9■□□□□ 0.3
CROCCP3Q8IVE0 EFNA2-201ENST00000215368 949 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
CROCCP3Q8IVE0 SMIM20-201ENST00000506197 935 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
CROCCP3Q8IVE0 ARHGEF28-214ENST00000545377 6351 ntAPPRIS P3 TSL 5 BASIC16.9■□□□□ 0.3
CROCCP3Q8IVE0 AP005205.2-201ENST00000577327 491 ntTSL 2 BASIC16.9■□□□□ 0.3
CROCCP3Q8IVE0 TRAF4-217ENST00000618771 543 ntTSL 5 BASIC16.9■□□□□ 0.3
CROCCP3Q8IVE0 SYBU-209ENST00000446070 2919 ntAPPRIS P4 TSL 1 (best) BASIC16.9■□□□□ 0.3
CROCCP3Q8IVE0 DCPS-201ENST00000263579 1479 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
CROCCP3Q8IVE0 PDLIM2-205ENST00000397761 1491 ntAPPRIS P1 TSL 5 BASIC16.9■□□□□ 0.3
CROCCP3Q8IVE0 LEF1-203ENST00000438313 1488 ntAPPRIS ALT1 TSL 1 (best) BASIC16.9■□□□□ 0.3
Retrieved 100 of 98,524 protein–RNA pairs in 19.9 ms