Protein–RNA interactions for Protein: Q8IV50

LYSMD2, LysM and putative peptidoglycan-binding domain-containing protein 2, humanhuman

Predictions only

Length 215 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LYSMD2Q8IV50 CYP4F8-210ENST00000612078 1889 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.22
LYSMD2Q8IV50 TRA2A-202ENST00000392502 2229 ntAPPRIS ALT2 TSL 2 BASIC16.39■□□□□ 0.22
LYSMD2Q8IV50 STX18-205ENST00000505286 1380 ntTSL 1 (best) BASIC16.39■□□□□ 0.21
LYSMD2Q8IV50 SPRED3-202ENST00000586301 1366 ntAPPRIS P1 TSL 5 BASIC16.39■□□□□ 0.21
LYSMD2Q8IV50 HLA-DQB1-204ENST00000399084 1734 ntAPPRIS P1 BASIC16.39■□□□□ 0.21
LYSMD2Q8IV50 TP53BP2-201ENST00000343537 4651 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
LYSMD2Q8IV50 RALY-203ENST00000375114 6430 ntAPPRIS ALT2 TSL 1 (best) BASIC16.39■□□□□ 0.21
LYSMD2Q8IV50 PAX7-201ENST00000375375 2260 ntTSL 1 (best) BASIC16.39■□□□□ 0.21
LYSMD2Q8IV50 AGBL5-202ENST00000360131 3177 ntAPPRIS P3 TSL 1 (best) BASIC16.39■□□□□ 0.21
LYSMD2Q8IV50 CCDC142-201ENST00000290418 2835 ntAPPRIS P2 TSL 2 BASIC16.39■□□□□ 0.21
LYSMD2Q8IV50 HARS-201ENST00000307633 1780 ntTSL 2 BASIC16.39■□□□□ 0.21
LYSMD2Q8IV50 RECK-201ENST00000377966 4888 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
LYSMD2Q8IV50 HNF4A-205ENST00000443598 1603 ntTSL 1 (best) BASIC16.39■□□□□ 0.21
LYSMD2Q8IV50 ABCG5-201ENST00000260645 2740 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
LYSMD2Q8IV50 MIR31HG-201ENST00000304425 745 ntTSL 2 BASIC16.39■□□□□ 0.21
LYSMD2Q8IV50 JTB-203ENST00000368589 1216 ntTSL 2 BASIC16.39■□□□□ 0.21
LYSMD2Q8IV50 MRPL14-201ENST00000372014 959 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
LYSMD2Q8IV50 LYRM9-201ENST00000379102 501 ntAPPRIS P1 TSL 2 BASIC16.39■□□□□ 0.21
LYSMD2Q8IV50 MCRIP2P1-201ENST00000394346 511 ntBASIC16.39■□□□□ 0.21
LYSMD2Q8IV50 KRT19P1-201ENST00000405746 1186 ntBASIC16.39■□□□□ 0.21
LYSMD2Q8IV50 LYRM9-206ENST00000508862 807 ntTSL 3 BASIC16.39■□□□□ 0.21
LYSMD2Q8IV50 AC012414.4-201ENST00000560839 1074 ntTSL 5 BASIC16.39■□□□□ 0.21
LYSMD2Q8IV50 AC060814.5-201ENST00000630916 1074 ntTSL 2 BASIC16.39■□□□□ 0.21
LYSMD2Q8IV50 ARAP1-AS2-201ENST00000500163 1824 ntTSL 2 BASIC16.39■□□□□ 0.21
LYSMD2Q8IV50 ENPP1-201ENST00000360971 7442 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
LYSMD2Q8IV50 RASGRP2-206ENST00000377494 2983 ntAPPRIS ALT1 TSL 2 BASIC16.39■□□□□ 0.21
LYSMD2Q8IV50 CHRNA4-207ENST00000615287 5643 ntTSL 5 BASIC16.39■□□□□ 0.21
LYSMD2Q8IV50 MAFG-202ENST00000392366 1743 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
LYSMD2Q8IV50 GABRB1-201ENST00000295454 2143 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
LYSMD2Q8IV50 WDR41-208ENST00000507029 1553 ntTSL 2 BASIC16.38■□□□□ 0.21
LYSMD2Q8IV50 C16orf45-201ENST00000300006 2404 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
LYSMD2Q8IV50 N4BP3-201ENST00000274605 6080 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
LYSMD2Q8IV50 PTGER3-208ENST00000370932 1841 ntAPPRIS ALT2 TSL 5 BASIC16.38■□□□□ 0.21
LYSMD2Q8IV50 TNK2-AS1-201ENST00000458180 2096 ntTSL 2 BASIC16.38■□□□□ 0.21
LYSMD2Q8IV50 NRXN1-220ENST00000611589 1857 ntTSL 5 BASIC16.38■□□□□ 0.21
LYSMD2Q8IV50 CCT6A-201ENST00000275603 2719 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
LYSMD2Q8IV50 PARS2-201ENST00000371279 2347 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
LYSMD2Q8IV50 C10orf10-201ENST00000298295 2120 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
LYSMD2Q8IV50 PTRH1-201ENST00000335223 759 ntTSL 1 (best) BASIC16.38■□□□□ 0.21
LYSMD2Q8IV50 CDKN2D-201ENST00000335766 1086 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
LYSMD2Q8IV50 TCTEX1D4-201ENST00000339355 763 ntAPPRIS P1 BASIC16.38■□□□□ 0.21
LYSMD2Q8IV50 PARP1-202ENST00000366792 553 ntTSL 3 BASIC16.38■□□□□ 0.21
LYSMD2Q8IV50 CEP104-201ENST00000378223 1121 ntTSL 1 (best) BASIC16.38■□□□□ 0.21
LYSMD2Q8IV50 ASPDH-202ENST00000389208 1040 ntAPPRIS P1 TSL 5 BASIC16.38■□□□□ 0.21
LYSMD2Q8IV50 YBX1P1-201ENST00000445822 960 ntBASIC16.38■□□□□ 0.21
LYSMD2Q8IV50 DM1-AS-203ENST00000590076 730 ntTSL 4 BASIC16.38■□□□□ 0.21
LYSMD2Q8IV50 AC100791.3-201ENST00000617619 330 ntBASIC16.38■□□□□ 0.21
LYSMD2Q8IV50 AC010536.3-201ENST00000620306 533 ntBASIC16.38■□□□□ 0.21
LYSMD2Q8IV50 SLC35A3-213ENST00000638988 1286 ntTSL 5 BASIC16.38■□□□□ 0.21
LYSMD2Q8IV50 SEMA6C-210ENST00000621728 1918 ntTSL 1 (best) BASIC16.38■□□□□ 0.21
LYSMD2Q8IV50 MPIG6B-204ENST00000375809 2396 ntAPPRIS ALT2 TSL 1 (best) BASIC16.38■□□□□ 0.21
LYSMD2Q8IV50 ZSCAN10-202ENST00000538082 2350 ntTSL 4 BASIC16.38■□□□□ 0.21
LYSMD2Q8IV50 CDCA4-202ENST00000392590 1536 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
LYSMD2Q8IV50 ELFN2-208ENST00000430883 1970 ntTSL 2 BASIC16.38■□□□□ 0.21
LYSMD2Q8IV50 SSH1-201ENST00000326470 2432 ntAPPRIS ALT2 TSL 2 BASIC16.38■□□□□ 0.21
LYSMD2Q8IV50 FOXA1-201ENST00000250448 2862 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
LYSMD2Q8IV50 ARL5A-201ENST00000295087 5326 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
LYSMD2Q8IV50 AC104417.2-201ENST00000562989 1793 ntBASIC16.38■□□□□ 0.21
LYSMD2Q8IV50 GRIN2C-202ENST00000347612 2929 ntAPPRIS ALT2 TSL 1 (best) BASIC16.38■□□□□ 0.21
LYSMD2Q8IV50 SCARB2-201ENST00000264896 4792 ntAPPRIS P2 TSL 1 (best) BASIC16.38■□□□□ 0.21
LYSMD2Q8IV50 RTN1-201ENST00000267484 3435 ntAPPRIS P4 TSL 1 (best) BASIC16.38■□□□□ 0.21
LYSMD2Q8IV50 GCK-205ENST00000437084 1385 ntTSL 5 BASIC16.38■□□□□ 0.21
LYSMD2Q8IV50 AL023806.1-201ENST00000603994 1649 ntBASIC16.37■□□□□ 0.21
LYSMD2Q8IV50 ZNF18-204ENST00000580306 2330 ntAPPRIS P3 TSL 2 BASIC16.37■□□□□ 0.21
LYSMD2Q8IV50 ASZ1-201ENST00000284629 1865 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
LYSMD2Q8IV50 ABCC3-202ENST00000427699 1881 ntTSL 1 (best) BASIC16.37■□□□□ 0.21
LYSMD2Q8IV50 LBX2-AS1-201ENST00000548978 1852 ntTSL 3 BASIC16.37■□□□□ 0.21
LYSMD2Q8IV50 TREX2-203ENST00000338525 2116 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
LYSMD2Q8IV50 KDELR3-201ENST00000216014 1728 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
LYSMD2Q8IV50 SORCS3-202ENST00000369701 5757 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
LYSMD2Q8IV50 SYNGR2-206ENST00000589711 2041 ntTSL 5 BASIC16.37■□□□□ 0.21
LYSMD2Q8IV50 AC093620.1-201ENST00000342963 583 ntTSL 3 BASIC16.37■□□□□ 0.21
LYSMD2Q8IV50 NDUFB2-207ENST00000465506 1101 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
LYSMD2Q8IV50 BCAP29-209ENST00000465919 942 ntTSL 2 BASIC16.37■□□□□ 0.21
LYSMD2Q8IV50 C1QTNF5-203ENST00000530681 1046 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
LYSMD2Q8IV50 CALM1-203ENST00000544280 1064 ntTSL 1 (best) BASIC16.37■□□□□ 0.21
LYSMD2Q8IV50 KRT18P61-201ENST00000585825 1298 ntBASIC16.37■□□□□ 0.21
LYSMD2Q8IV50 MFSD11-216ENST00000590393 1141 ntBASIC16.37■□□□□ 0.21
LYSMD2Q8IV50 SPRYD7-202ENST00000378195 3086 ntTSL 2 BASIC16.37■□□□□ 0.21
LYSMD2Q8IV50 MAP2K5-201ENST00000178640 2347 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
LYSMD2Q8IV50 MRTO4-201ENST00000330263 2315 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
LYSMD2Q8IV50 ZDHHC4-205ENST00000396713 1552 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
LYSMD2Q8IV50 AC008691.1-203ENST00000515337 1580 ntTSL 2 BASIC16.37■□□□□ 0.21
LYSMD2Q8IV50 WHAMMP3-203ENST00000621139 4494 ntTSL 1 (best) BASIC16.37■□□□□ 0.21
LYSMD2Q8IV50 CPZ-201ENST00000315782 2136 ntAPPRIS P3 TSL 1 (best) BASIC16.37■□□□□ 0.21
LYSMD2Q8IV50 DND1-201ENST00000542735 1605 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
LYSMD2Q8IV50 FBXO7-201ENST00000266087 2195 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
LYSMD2Q8IV50 JADE2-201ENST00000282605 2748 ntAPPRIS P1 TSL 2 BASIC16.37■□□□□ 0.21
LYSMD2Q8IV50 CLDN7-203ENST00000538261 1923 ntTSL 5 BASIC16.37■□□□□ 0.21
LYSMD2Q8IV50 SGPP1-201ENST00000247225 3312 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
LYSMD2Q8IV50 GNAI2-204ENST00000440628 1663 ntTSL 5 BASIC16.37■□□□□ 0.21
LYSMD2Q8IV50 AC126773.2-201ENST00000562172 1682 ntTSL 3 BASIC16.37■□□□□ 0.21
LYSMD2Q8IV50 CHAT-205ENST00000395562 2528 ntAPPRIS ALT2 TSL 1 (best) BASIC16.37■□□□□ 0.21
LYSMD2Q8IV50 USP7-201ENST00000344836 5412 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
LYSMD2Q8IV50 P2RY6-201ENST00000349767 1700 ntAPPRIS P1 TSL 2 BASIC16.36■□□□□ 0.21
LYSMD2Q8IV50 ETV4-211ENST00000591713 1727 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
LYSMD2Q8IV50 ADRA1A-206ENST00000380586 2304 ntTSL 1 (best) BASIC16.36■□□□□ 0.21
LYSMD2Q8IV50 MYEOV-203ENST00000535407 2306 ntAPPRIS ALT2 TSL 2 BASIC16.36■□□□□ 0.21
LYSMD2Q8IV50 MTERF2-202ENST00000392830 1763 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
LYSMD2Q8IV50 CYP4F2-201ENST00000011989 2067 ntAPPRIS ALT1 TSL 1 (best) BASIC16.36■□□□□ 0.21
Retrieved 100 of 98,524 protein–RNA pairs in 34.7 ms