Protein–RNA interactions for Protein: Q71F78

LCA10, Putative lung carcinoma-associated protein 10, humanhuman

Predictions only

Length 164 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LCA10Q71F78 AVPR1B-201ENST00000367126 2237 ntAPPRIS P1 TSL 1 (best) BASIC10.07□□□□□ -0.8
LCA10Q71F78 LETM2-205ENST00000519476 2240 ntTSL 1 (best) BASIC10.07□□□□□ -0.8
LCA10Q71F78 NEK10-202ENST00000341435 2638 ntTSL 2 BASIC10.07□□□□□ -0.8
LCA10Q71F78 DGKZ-201ENST00000318201 3213 ntTSL 2 BASIC10.07□□□□□ -0.8
LCA10Q71F78 TNIP1-208ENST00000520931 2680 ntAPPRIS ALT2 TSL 1 (best) BASIC10.07□□□□□ -0.8
LCA10Q71F78 UPK3B-202ENST00000334348 2373 ntAPPRIS ALT2 TSL 2 BASIC10.07□□□□□ -0.8
LCA10Q71F78 TRPV4-208ENST00000544971 2295 ntTSL 1 (best) BASIC10.07□□□□□ -0.8
LCA10Q71F78 ENOSF1-201ENST00000251101 1867 ntAPPRIS P1 TSL 1 (best) BASIC10.07□□□□□ -0.8
LCA10Q71F78 ARRB2-202ENST00000346341 1769 ntTSL 2 BASIC10.07□□□□□ -0.8
LCA10Q71F78 VCPKMT-202ENST00000395860 1761 ntAPPRIS P1 TSL 1 (best) BASIC10.07□□□□□ -0.8
LCA10Q71F78 SYT8-201ENST00000341958 1556 ntAPPRIS ALT2 TSL 5 BASIC10.07□□□□□ -0.8
LCA10Q71F78 LINC00605-201ENST00000514902 1558 ntTSL 1 (best) BASIC10.07□□□□□ -0.8
LCA10Q71F78 SPR-201ENST00000234454 1480 ntAPPRIS P1 TSL 1 (best) BASIC10.07□□□□□ -0.8
LCA10Q71F78 KBTBD13-201ENST00000432196 1377 ntAPPRIS P1 BASIC10.07□□□□□ -0.8
LCA10Q71F78 CBR3-201ENST00000290354 1169 ntAPPRIS P1 TSL 1 (best) BASIC10.07□□□□□ -0.8
LCA10Q71F78 YTHDF1-201ENST00000370334 747 ntTSL 3 BASIC10.07□□□□□ -0.8
LCA10Q71F78 ADAMTS13-204ENST00000371911 1155 ntTSL 1 (best) BASIC10.07□□□□□ -0.8
LCA10Q71F78 HM13-AS1-201ENST00000412178 489 ntTSL 3 BASIC10.07□□□□□ -0.8
LCA10Q71F78 PEMT-206ENST00000435340 960 ntTSL 5 BASIC10.07□□□□□ -0.8
LCA10Q71F78 PRKCQ-AS1-202ENST00000445427 1133 ntTSL 1 (best) BASIC10.07□□□□□ -0.8
LCA10Q71F78 FAM71E1-204ENST00000600100 1281 ntAPPRIS ALT2 TSL 1 (best) BASIC10.07□□□□□ -0.8
LCA10Q71F78 AC120498.10-201ENST00000621827 505 ntBASIC10.07□□□□□ -0.8
LCA10Q71F78 RARRES2P11-201ENST00000635158 484 ntBASIC10.07□□□□□ -0.8
LCA10Q71F78 ADAMTS14-202ENST00000373208 5269 ntAPPRIS P4 TSL 2 BASIC10.07□□□□□ -0.8
LCA10Q71F78 LENG8-209ENST00000616932 2825 ntAPPRIS ALT2 TSL 5 BASIC10.07□□□□□ -0.8
LCA10Q71F78 RUNX1-203ENST00000358356 2720 ntTSL 1 (best) BASIC10.07□□□□□ -0.8
LCA10Q71F78 KIF3A-202ENST00000378746 6325 ntAPPRIS P3 TSL 5 BASIC10.07□□□□□ -0.8
LCA10Q71F78 ZNF133-206ENST00000402618 2622 ntTSL 2 BASIC10.07□□□□□ -0.8
LCA10Q71F78 PKMYT1-203ENST00000431515 2308 ntTSL 2 BASIC10.07□□□□□ -0.8
LCA10Q71F78 CHL1-202ENST00000397491 5235 ntTSL 1 (best) BASIC10.07□□□□□ -0.8
LCA10Q71F78 AL590648.2-201ENST00000427949 2225 ntTSL 2 BASIC10.07□□□□□ -0.8
LCA10Q71F78 TSHZ1-204ENST00000580243 3582 ntAPPRIS P1 TSL 2 BASIC10.07□□□□□ -0.8
LCA10Q71F78 AK5-203ENST00000354567 3251 ntAPPRIS P1 TSL 1 (best) BASIC10.07□□□□□ -0.8
LCA10Q71F78 WSCD1-210ENST00000574946 5884 ntAPPRIS P1 TSL 2 BASIC10.07□□□□□ -0.8
LCA10Q71F78 P2RY11-201ENST00000321826 1943 ntAPPRIS P1 TSL 1 (best) BASIC10.07□□□□□ -0.8
LCA10Q71F78 CES3-203ENST00000543856 3178 ntTSL 2 BASIC10.07□□□□□ -0.8
LCA10Q71F78 AC073592.3-201ENST00000625118 1834 ntBASIC10.07□□□□□ -0.8
LCA10Q71F78 RASSF7-204ENST00000431809 1745 ntAPPRIS ALT2 TSL 5 BASIC10.07□□□□□ -0.8
LCA10Q71F78 IGFLR1-201ENST00000246532 1645 ntAPPRIS P2 TSL 1 (best) BASIC10.07□□□□□ -0.8
LCA10Q71F78 GPR162-203ENST00000428545 1610 ntTSL 1 (best) BASIC10.07□□□□□ -0.8
LCA10Q71F78 ZNRF3-201ENST00000402174 2667 ntAPPRIS P3 TSL 2 BASIC10.07□□□□□ -0.8
LCA10Q71F78 PRPF40B-201ENST00000261897 3602 ntAPPRIS ALT2 TSL 1 (best) BASIC10.07□□□□□ -0.8
LCA10Q71F78 SYBU-232ENST00000533171 2498 ntAPPRIS ALT2 TSL 2 BASIC10.07□□□□□ -0.8
LCA10Q71F78 LSM12-204ENST00000591247 2484 ntAPPRIS P1 TSL 1 (best) BASIC10.07□□□□□ -0.8
LCA10Q71F78 FGR-202ENST00000374004 2350 ntAPPRIS P1 TSL 1 (best) BASIC10.07□□□□□ -0.8
LCA10Q71F78 ZBTB42-202ENST00000555360 1411 ntAPPRIS P1 TSL 1 (best) BASIC10.07□□□□□ -0.8
LCA10Q71F78 EFNB3-201ENST00000226091 3222 ntAPPRIS P1 TSL 1 (best) BASIC10.07□□□□□ -0.8
LCA10Q71F78 PPP1R21-201ENST00000281394 3137 ntTSL 1 (best) BASIC10.07□□□□□ -0.8
LCA10Q71F78 BANP-202ENST00000355022 2164 ntTSL 1 (best) BASIC10.07□□□□□ -0.8
LCA10Q71F78 CDKN2B-AS1-208ENST00000580576 2175 ntTSL 1 (best) BASIC10.07□□□□□ -0.8
LCA10Q71F78 PACS2-202ENST00000430725 2944 ntTSL 1 (best) BASIC10.06□□□□□ -0.8
LCA10Q71F78 PAPD5-203ENST00000561678 2916 ntTSL 5 BASIC10.06□□□□□ -0.8
LCA10Q71F78 ENTPD2-202ENST00000355097 2095 ntAPPRIS P1 TSL 1 (best) BASIC10.06□□□□□ -0.8
LCA10Q71F78 CNPPD1-201ENST00000360507 2060 ntAPPRIS P1 TSL 1 (best) BASIC10.06□□□□□ -0.8
LCA10Q71F78 OLA1-201ENST00000284719 4417 ntAPPRIS P1 TSL 1 (best) BASIC10.06□□□□□ -0.8
LCA10Q71F78 ZNF133-204ENST00000396026 2717 ntAPPRIS P3 TSL 3 BASIC10.06□□□□□ -0.8
LCA10Q71F78 TMEM57-202ENST00000399766 3294 ntTSL 1 (best) BASIC10.06□□□□□ -0.8
LCA10Q71F78 GORAB-201ENST00000367762 1699 ntTSL 1 (best) BASIC10.06□□□□□ -0.8
LCA10Q71F78 TRAF3IP1-201ENST00000373327 4279 ntAPPRIS P3 TSL 1 (best) BASIC10.06□□□□□ -0.8
LCA10Q71F78 ENTPD8-202ENST00000371506 2222 ntAPPRIS P1 TSL 5 BASIC10.06□□□□□ -0.8
LCA10Q71F78 LINC00336-201ENST00000477984 2107 ntTSL 2 BASIC10.06□□□□□ -0.8
LCA10Q71F78 PLEKHA2-206ENST00000521746 2127 ntTSL 5 BASIC10.06□□□□□ -0.8
LCA10Q71F78 SGK1-205ENST00000413996 2686 ntTSL 1 (best) BASIC10.06□□□□□ -0.8
LCA10Q71F78 MEST-201ENST00000223215 2465 ntAPPRIS P4 TSL 1 (best) BASIC10.06□□□□□ -0.8
LCA10Q71F78 ZYG11A-202ENST00000371532 3942 ntTSL 5 BASIC10.06□□□□□ -0.8
LCA10Q71F78 CAMK2G-205ENST00000372765 1822 ntTSL 5 BASIC10.06□□□□□ -0.8
LCA10Q71F78 PPCS-202ENST00000372560 793 ntTSL 1 (best) BASIC10.06□□□□□ -0.8
LCA10Q71F78 NUDT14-202ENST00000392568 845 ntAPPRIS P1 TSL 1 (best) BASIC10.06□□□□□ -0.8
LCA10Q71F78 MTURN-203ENST00000409688 843 ntTSL 2 BASIC10.06□□□□□ -0.8
LCA10Q71F78 PRKCQ-AS1-204ENST00000455810 920 ntTSL 2 BASIC10.06□□□□□ -0.8
LCA10Q71F78 AP006621.1-201ENST00000532946 536 ntTSL 5 BASIC10.06□□□□□ -0.8
LCA10Q71F78 AC007728.2-201ENST00000563315 2296 ntTSL 5 BASIC10.06□□□□□ -0.8
LCA10Q71F78 AC118553.2-202ENST00000638792 2729 ntAPPRIS ALT2 TSL 5 BASIC10.06□□□□□ -0.8
LCA10Q71F78 CLDND1-201ENST00000341181 2161 ntAPPRIS P1 TSL 1 (best) BASIC10.06□□□□□ -0.8
LCA10Q71F78 BEST2-202ENST00000549706 2183 ntAPPRIS P1 TSL 5 BASIC10.06□□□□□ -0.8
LCA10Q71F78 BICD2-201ENST00000356884 6427 ntAPPRIS ALT2 TSL 1 (best) BASIC10.06□□□□□ -0.8
LCA10Q71F78 ARFIP2-201ENST00000254584 2543 ntAPPRIS P1 TSL 1 (best) BASIC10.06□□□□□ -0.8
LCA10Q71F78 STAMBPL1-203ENST00000371926 2532 ntAPPRIS P1 TSL 1 (best) BASIC10.06□□□□□ -0.8
LCA10Q71F78 RET-202ENST00000355710 5659 ntAPPRIS P3 TSL 5 BASIC10.06□□□□□ -0.8
LCA10Q71F78 MBNL1-205ENST00000355460 5941 ntAPPRIS ALT1 TSL 1 (best) BASIC10.06□□□□□ -0.8
LCA10Q71F78 PHLDA1-203ENST00000619060 5913 ntAPPRIS P2 TSL 1 (best) BASIC10.06□□□□□ -0.8
LCA10Q71F78 RTCA-201ENST00000260563 1534 ntTSL 1 (best) BASIC10.06□□□□□ -0.8
LCA10Q71F78 SFRP1-201ENST00000220772 4492 ntAPPRIS P1 TSL 1 (best) BASIC10.06□□□□□ -0.8
LCA10Q71F78 BRD2-202ENST00000374831 4807 ntAPPRIS P3 TSL 1 (best) BASIC10.06□□□□□ -0.8
LCA10Q71F78 TRPC4AP-202ENST00000451813 3138 ntTSL 2 BASIC10.06□□□□□ -0.8
LCA10Q71F78 BBS5-201ENST00000295240 3475 ntAPPRIS P1 TSL 1 (best) BASIC10.06□□□□□ -0.8
LCA10Q71F78 SUSD4-202ENST00000343846 3480 ntAPPRIS P1 TSL 2 BASIC10.06□□□□□ -0.8
LCA10Q71F78 KRT16P2-201ENST00000414673 1423 ntBASIC10.06□□□□□ -0.8
LCA10Q71F78 AC116050.2-201ENST00000612102 1779 ntBASIC10.06□□□□□ -0.8
LCA10Q71F78 ATG9B-212ENST00000639579 4539 ntAPPRIS P1 TSL 1 (best) BASIC10.06□□□□□ -0.8
LCA10Q71F78 MIF4GD-202ENST00000325102 1306 ntAPPRIS P1 TSL 2 BASIC10.06□□□□□ -0.8
LCA10Q71F78 QRICH1-202ENST00000395443 3549 ntAPPRIS P1 TSL 1 (best) BASIC10.06□□□□□ -0.8
LCA10Q71F78 AP001122.1-202ENST00000501648 1916 ntTSL 2 BASIC10.05□□□□□ -0.8
LCA10Q71F78 AC107959.1-202ENST00000502083 1945 ntTSL 1 (best) BASIC10.05□□□□□ -0.8
LCA10Q71F78 HSPA1A-202ENST00000608703 1909 ntTSL 2 BASIC10.05□□□□□ -0.8
LCA10Q71F78 KCNC1-201ENST00000265969 4295 ntAPPRIS P1 TSL 5 BASIC10.05□□□□□ -0.8
LCA10Q71F78 VLDLR-202ENST00000382099 3240 ntAPPRIS ALT1 TSL 1 (best) BASIC10.05□□□□□ -0.8
LCA10Q71F78 BPIFB4-201ENST00000375483 2159 ntAPPRIS P1 TSL 5 BASIC10.05□□□□□ -0.8
LCA10Q71F78 NFIC-206ENST00000589123 8068 ntTSL 1 (best) BASIC10.05□□□□□ -0.8
LCA10Q71F78 BCAR1-202ENST00000393420 2667 ntTSL 5 BASIC10.05□□□□□ -0.8
Retrieved 100 of 98,524 protein–RNA pairs in 30.1 ms