Protein–RNA interactions for Protein: Q6ZW05

PTCHD4, Patched domain-containing protein 4, humanhuman

Predictions only

Length 846 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PTCHD4Q6ZW05 DTWD1-202ENST00000403028 1584 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
PTCHD4Q6ZW05 KXD1-203ENST00000540691 1592 ntAPPRIS P1 TSL 3 BASIC17.18■□□□□ 0.34
PTCHD4Q6ZW05 NOL3-204ENST00000564053 1592 ntAPPRIS ALT2 TSL 2 BASIC17.18■□□□□ 0.34
PTCHD4Q6ZW05 ALDH4A1-201ENST00000290597 2124 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
PTCHD4Q6ZW05 RABEP2-202ENST00000358201 2821 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
PTCHD4Q6ZW05 TMEM74-201ENST00000297459 1741 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
PTCHD4Q6ZW05 KHNYN-206ENST00000556842 2443 ntAPPRIS P1 TSL 2 BASIC17.18■□□□□ 0.34
PTCHD4Q6ZW05 PRR23B-201ENST00000329447 1896 ntAPPRIS P1 BASIC17.18■□□□□ 0.34
PTCHD4Q6ZW05 GATB-213ENST00000515812 1893 ntTSL 5 BASIC17.18■□□□□ 0.34
PTCHD4Q6ZW05 STX3-201ENST00000337979 3299 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
PTCHD4Q6ZW05 NRG2-205ENST00000361474 3020 ntTSL 1 (best) BASIC17.18■□□□□ 0.34
PTCHD4Q6ZW05 TACC1-202ENST00000317827 7802 ntAPPRIS P3 TSL 1 (best) BASIC17.18■□□□□ 0.34
PTCHD4Q6ZW05 RBPJL-203ENST00000372743 1623 ntAPPRIS ALT1 TSL 1 (best) BASIC17.18■□□□□ 0.34
PTCHD4Q6ZW05 GSDMD-206ENST00000526406 2496 ntAPPRIS P2 TSL 2 BASIC17.18■□□□□ 0.34
PTCHD4Q6ZW05 PFN2-203ENST00000452853 1780 ntAPPRIS ALT1 TSL 1 (best) BASIC17.17■□□□□ 0.34
PTCHD4Q6ZW05 SIN3A-203ENST00000394949 4930 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
PTCHD4Q6ZW05 CYP7B1-201ENST00000310193 2202 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
PTCHD4Q6ZW05 COL4A3BP-203ENST00000380494 5651 ntTSL 2 BASIC17.17■□□□□ 0.34
PTCHD4Q6ZW05 ADGRB2-201ENST00000373655 5400 ntAPPRIS P4 TSL 1 (best) BASIC17.17■□□□□ 0.34
PTCHD4Q6ZW05 SAAL1-204ENST00000529318 1503 ntAPPRIS ALT1 TSL 5 BASIC17.17■□□□□ 0.34
PTCHD4Q6ZW05 TXNRD3-205ENST00000640797 1824 ntAPPRIS ALT2 TSL 2 BASIC17.17■□□□□ 0.34
PTCHD4Q6ZW05 CPZ-201ENST00000315782 2136 ntAPPRIS P3 TSL 1 (best) BASIC17.17■□□□□ 0.34
PTCHD4Q6ZW05 GOLGA6L2-204ENST00000567107 3030 ntAPPRIS P2 TSL 5 BASIC17.17■□□□□ 0.34
PTCHD4Q6ZW05 MEN1-203ENST00000337652 3162 ntAPPRIS P3 TSL 5 BASIC17.17■□□□□ 0.34
PTCHD4Q6ZW05 SYNE2-201ENST00000341472 1132 ntTSL 1 (best) BASIC17.17■□□□□ 0.34
PTCHD4Q6ZW05 WIPF1-202ENST00000359761 2003 ntAPPRIS P2 TSL 1 (best) BASIC17.17■□□□□ 0.34
PTCHD4Q6ZW05 CD1E-205ENST00000368160 1727 ntAPPRIS ALT2 TSL 1 (best) BASIC17.17■□□□□ 0.34
PTCHD4Q6ZW05 CT47A12-201ENST00000419982 1165 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
PTCHD4Q6ZW05 CENPS-CORT-202ENST00000465026 494 ntTSL 3 BASIC17.17■□□□□ 0.34
PTCHD4Q6ZW05 CENPS-CORT-203ENST00000470413 626 ntTSL 2 BASIC17.17■□□□□ 0.34
PTCHD4Q6ZW05 RHOD-202ENST00000532559 538 ntTSL 3 BASIC17.17■□□□□ 0.34
PTCHD4Q6ZW05 PSME3-210ENST00000590720 998 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
PTCHD4Q6ZW05 DEDD2-205ENST00000596251 1183 ntAPPRIS P3 TSL 1 (best) BASIC17.17■□□□□ 0.34
PTCHD4Q6ZW05 AC008403.3-201ENST00000598924 454 ntBASIC17.17■□□□□ 0.34
PTCHD4Q6ZW05 GTF2IRD2B-206ENST00000614064 573 ntTSL 1 (best) BASIC17.17■□□□□ 0.34
PTCHD4Q6ZW05 AC005225.2-202ENST00000617980 408 ntTSL 4 BASIC17.17■□□□□ 0.34
PTCHD4Q6ZW05 AC068987.5-201ENST00000642069 987 ntAPPRIS P1 BASIC17.17■□□□□ 0.34
PTCHD4Q6ZW05 SNAPC3-202ENST00000380821 5680 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
PTCHD4Q6ZW05 LYSMD4-201ENST00000332728 2847 ntTSL 4 BASIC17.17■□□□□ 0.34
PTCHD4Q6ZW05 TRAPPC12-201ENST00000324266 2508 ntAPPRIS P2 TSL 1 (best) BASIC17.17■□□□□ 0.34
PTCHD4Q6ZW05 KLHL33-202ENST00000636854 2394 ntAPPRIS P1 TSL 5 BASIC17.17■□□□□ 0.34
PTCHD4Q6ZW05 ADRA1A-205ENST00000380582 2089 ntTSL 1 (best) BASIC17.17■□□□□ 0.34
PTCHD4Q6ZW05 PROSER2-201ENST00000277570 3333 ntAPPRIS P2 TSL 1 (best) BASIC17.17■□□□□ 0.34
PTCHD4Q6ZW05 FAM83A-205ENST00000522648 1604 ntTSL 1 (best) BASIC17.17■□□□□ 0.34
PTCHD4Q6ZW05 TUBGCP3-202ENST00000375669 2723 ntTSL 1 (best) BASIC17.17■□□□□ 0.34
PTCHD4Q6ZW05 RAB4B-EGLN2-201ENST00000594136 2554 ntAPPRIS P1 TSL 2 BASIC17.17■□□□□ 0.34
PTCHD4Q6ZW05 IDUA-210ENST00000514224 2130 ntTSL 2 BASIC17.17■□□□□ 0.34
PTCHD4Q6ZW05 MSANTD1-201ENST00000438480 2922 ntAPPRIS P3 TSL 5 BASIC17.17■□□□□ 0.34
PTCHD4Q6ZW05 NDFIP1-201ENST00000253814 3851 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
PTCHD4Q6ZW05 PRDM8-203ENST00000504452 3706 ntAPPRIS P1 TSL 5 BASIC17.17■□□□□ 0.34
PTCHD4Q6ZW05 C6orf118-201ENST00000230301 1812 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
PTCHD4Q6ZW05 QPCTL-202ENST00000366382 1814 ntTSL 2 BASIC17.17■□□□□ 0.34
PTCHD4Q6ZW05 ARAP1-AS2-201ENST00000500163 1824 ntTSL 2 BASIC17.17■□□□□ 0.34
PTCHD4Q6ZW05 NAPRT-202ENST00000426292 1654 ntTSL 1 (best) BASIC17.16■□□□□ 0.34
PTCHD4Q6ZW05 NARFL-218ENST00000568545 2486 ntTSL 2 BASIC17.16■□□□□ 0.34
PTCHD4Q6ZW05 CORO6-210ENST00000580212 2345 ntTSL 5 BASIC17.16■□□□□ 0.34
PTCHD4Q6ZW05 SNAPC2-201ENST00000221573 1542 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
PTCHD4Q6ZW05 HIGD1A-201ENST00000321331 1373 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
PTCHD4Q6ZW05 ADAMTS16-203ENST00000511368 2682 ntTSL 1 (best) BASIC17.16■□□□□ 0.34
PTCHD4Q6ZW05 GABRD-205ENST00000638771 1707 ntAPPRIS ALT2 TSL 3 BASIC17.16■□□□□ 0.34
PTCHD4Q6ZW05 FAM111A-204ENST00000528737 6189 ntAPPRIS P1 TSL 2 BASIC17.16■□□□□ 0.34
PTCHD4Q6ZW05 RABEP1-202ENST00000537505 5365 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
PTCHD4Q6ZW05 SKOR1-204ENST00000554240 3597 ntAPPRIS ALT2 TSL 5 BASIC17.16■□□□□ 0.34
PTCHD4Q6ZW05 FAM131A-202ENST00000340957 2421 ntTSL 1 (best) BASIC17.16■□□□□ 0.34
PTCHD4Q6ZW05 IPMK-201ENST00000373935 6133 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
PTCHD4Q6ZW05 FAM208A-209ENST00000493960 5600 ntAPPRIS P2 TSL 5 BASIC17.16■□□□□ 0.34
PTCHD4Q6ZW05 MUTYH-202ENST00000355498 1776 ntAPPRIS ALT2 TSL 1 (best) BASIC17.16■□□□□ 0.34
PTCHD4Q6ZW05 FBF1-205ENST00000586717 4825 ntAPPRIS ALT2 TSL 5 BASIC17.16■□□□□ 0.34
PTCHD4Q6ZW05 OGG1-209ENST00000383826 1069 ntTSL 5 BASIC17.16■□□□□ 0.34
PTCHD4Q6ZW05 C2orf82-203ENST00000409533 561 ntAPPRIS P2 TSL 4 BASIC17.16■□□□□ 0.34
PTCHD4Q6ZW05 ZNF295-AS1-201ENST00000412906 952 ntTSL 1 (best) BASIC17.16■□□□□ 0.34
PTCHD4Q6ZW05 AC079145.1-201ENST00000416575 541 ntTSL 2 BASIC17.16■□□□□ 0.34
PTCHD4Q6ZW05 MAGI2-AS3-209ENST00000448195 774 ntTSL 3 BASIC17.16■□□□□ 0.34
PTCHD4Q6ZW05 IDH1-AS1-202ENST00000448588 489 ntTSL 3 BASIC17.16■□□□□ 0.34
PTCHD4Q6ZW05 C17orf107-202ENST00000521575 1275 ntAPPRIS ALT2 TSL 1 (best) BASIC17.16■□□□□ 0.34
PTCHD4Q6ZW05 NOXO1-205ENST00000566005 1144 ntTSL 1 (best) BASIC17.16■□□□□ 0.34
PTCHD4Q6ZW05 AC127496.6-201ENST00000576215 338 ntTSL 3 BASIC17.16■□□□□ 0.34
PTCHD4Q6ZW05 TRIM8-201ENST00000302424 2831 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
PTCHD4Q6ZW05 WNK1-206ENST00000535572 9886 ntAPPRIS ALT2 TSL 1 (best) BASIC17.16■□□□□ 0.34
PTCHD4Q6ZW05 ZNF354C-201ENST00000315475 5411 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
PTCHD4Q6ZW05 IL17RC-206ENST00000416074 2342 ntAPPRIS ALT2 TSL 1 (best) BASIC17.16■□□□□ 0.34
PTCHD4Q6ZW05 SNAP23-201ENST00000249647 2687 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
PTCHD4Q6ZW05 LETM2-208ENST00000524874 1459 ntTSL 5 BASIC17.16■□□□□ 0.34
PTCHD4Q6ZW05 NRBP1-204ENST00000379863 2174 ntTSL 5 BASIC17.16■□□□□ 0.34
PTCHD4Q6ZW05 WIZ-201ENST00000263381 5695 ntAPPRIS P2 TSL 2 BASIC17.16■□□□□ 0.34
PTCHD4Q6ZW05 TOR3A-203ENST00000367627 2724 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
PTCHD4Q6ZW05 DIO1-201ENST00000322679 1658 ntTSL 1 (best) BASIC17.16■□□□□ 0.34
PTCHD4Q6ZW05 ATP6V0B-213ENST00000532642 1685 ntTSL 2 BASIC17.16■□□□□ 0.34
PTCHD4Q6ZW05 DIO1-217ENST00000617230 1656 ntTSL 5 BASIC17.16■□□□□ 0.34
PTCHD4Q6ZW05 PHF1-201ENST00000374512 2224 ntTSL 1 (best) BASIC17.16■□□□□ 0.34
PTCHD4Q6ZW05 AC008764.6-201ENST00000595909 2069 ntBASIC17.16■□□□□ 0.34
PTCHD4Q6ZW05 TFCP2-205ENST00000549867 1727 ntTSL 5 BASIC17.16■□□□□ 0.34
PTCHD4Q6ZW05 ZFC3H1-206ENST00000548100 1771 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
PTCHD4Q6ZW05 MAPKAPK3-201ENST00000357955 2500 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
PTCHD4Q6ZW05 KMT2E-207ENST00000476671 2523 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
PTCHD4Q6ZW05 ADPGK-AS1-201ENST00000563592 2730 ntTSL 2 BASIC17.15■□□□□ 0.34
PTCHD4Q6ZW05 RASL11B-201ENST00000248706 1995 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
PTCHD4Q6ZW05 TFEB-201ENST00000230323 2354 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
PTCHD4Q6ZW05 NR2F1-205ENST00000615873 1427 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
PTCHD4Q6ZW05 FAM53A-207ENST00000489363 2776 ntTSL 2 BASIC17.15■□□□□ 0.34
Retrieved 100 of 98,524 protein–RNA pairs in 24.5 ms