Protein–RNA interactions for Protein: Q6VY07

PACS1, Phosphofurin acidic cluster sorting protein 1, humanhuman

Predictions only

Length 963 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PACS1Q6VY07 C7orf49-202ENST00000424142 1738 ntTSL 2 BASIC18.86■□□□□ 0.61
PACS1Q6VY07 NAPRT-202ENST00000426292 1654 ntTSL 1 (best) BASIC18.86■□□□□ 0.61
PACS1Q6VY07 ZCCHC17-205ENST00000615916 1652 ntTSL 1 (best) BASIC18.86■□□□□ 0.61
PACS1Q6VY07 MTMR9LP-203ENST00000426597 1545 ntBASIC18.86■□□□□ 0.61
PACS1Q6VY07 RPRM-201ENST00000325926 1471 ntAPPRIS P1 BASIC18.86■□□□□ 0.61
PACS1Q6VY07 KATNBL1P6-202ENST00000562413 1466 ntBASIC18.86■□□□□ 0.61
PACS1Q6VY07 RSPO4-201ENST00000217260 2707 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
PACS1Q6VY07 C9orf129-201ENST00000375419 1154 ntAPPRIS P1 TSL 5 BASIC18.86■□□□□ 0.61
PACS1Q6VY07 TMSB4X-201ENST00000380633 495 ntAPPRIS P1 TSL 3 BASIC18.86■□□□□ 0.61
PACS1Q6VY07 RTBDN-202ENST00000393233 1000 ntAPPRIS ALT2 TSL 3 BASIC18.86■□□□□ 0.61
PACS1Q6VY07 AL355355.2-201ENST00000442321 338 ntBASIC18.86■□□□□ 0.61
PACS1Q6VY07 TGIF1-219ENST00000551541 990 ntTSL 2 BASIC18.86■□□□□ 0.61
PACS1Q6VY07 TNFRSF12A-206ENST00000575124 1133 ntTSL 2 BASIC18.86■□□□□ 0.61
PACS1Q6VY07 MIR4785-201ENST00000585005 73 ntBASIC18.86■□□□□ 0.61
PACS1Q6VY07 REXO1L10P-201ENST00000615707 1290 ntBASIC18.86■□□□□ 0.61
PACS1Q6VY07 REXO1L12P-201ENST00000622156 912 ntBASIC18.86■□□□□ 0.61
PACS1Q6VY07 DECR2-212ENST00000627716 352 ntTSL 2 BASIC18.86■□□□□ 0.61
PACS1Q6VY07 SHKBP1-201ENST00000291842 2363 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
PACS1Q6VY07 EGFL6-201ENST00000361306 2398 ntAPPRIS P3 TSL 1 (best) BASIC18.86■□□□□ 0.61
PACS1Q6VY07 SUMF2-202ENST00000342190 1876 ntTSL 1 (best) BASIC18.86■□□□□ 0.61
PACS1Q6VY07 PLEKHG5-207ENST00000400913 4698 ntAPPRIS P3 TSL 5 BASIC18.86■□□□□ 0.61
PACS1Q6VY07 FN3KRP-201ENST00000269373 1849 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
PACS1Q6VY07 PPP2R2C-209ENST00000515571 1832 ntTSL 1 (best) BASIC18.86■□□□□ 0.61
PACS1Q6VY07 CERS4-201ENST00000251363 1797 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
PACS1Q6VY07 SHANK3-203ENST00000445220 5175 ntAPPRIS ALT2 TSL 5 BASIC18.86■□□□□ 0.61
PACS1Q6VY07 CYP2D7-203ENST00000433992 1740 ntTSL 1 (best) BASIC18.86■□□□□ 0.61
PACS1Q6VY07 CYP2D7-207ENST00000612115 1734 ntAPPRIS P1 TSL 5 BASIC18.86■□□□□ 0.61
PACS1Q6VY07 HOXA13-201ENST00000222753 5030 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
PACS1Q6VY07 RBM42-201ENST00000262633 1680 ntAPPRIS P2 TSL 1 (best) BASIC18.85■□□□□ 0.61
PACS1Q6VY07 NFYC-AS1-201ENST00000606277 1687 ntBASIC18.85■□□□□ 0.61
PACS1Q6VY07 TBX2-201ENST00000240328 3339 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
PACS1Q6VY07 CCNJL-203ENST00000393977 3320 ntTSL 1 (best) BASIC18.85■□□□□ 0.61
PACS1Q6VY07 C5orf30-203ENST00000515669 1573 ntAPPRIS P1 TSL 3 BASIC18.85■□□□□ 0.61
PACS1Q6VY07 RTN4-207ENST00000402434 1456 ntTSL 5 BASIC18.85■□□□□ 0.61
PACS1Q6VY07 PRSS50-202ENST00000315170 1372 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
PACS1Q6VY07 CACNA1B-204ENST00000371357 9642 ntAPPRIS ALT2 TSL 5 BASIC18.85■□□□□ 0.61
PACS1Q6VY07 GLYCTK-202ENST00000436784 1982 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
PACS1Q6VY07 PDE4A-202ENST00000344979 2579 ntTSL 1 (best) BASIC18.85■□□□□ 0.61
PACS1Q6VY07 KIAA1522-201ENST00000294521 878 ntAPPRIS ALT2 TSL 2 BASIC18.85■□□□□ 0.61
PACS1Q6VY07 HLA-DRB1-201ENST00000360004 1229 ntAPPRIS P1 BASIC18.85■□□□□ 0.61
PACS1Q6VY07 DHDH-203ENST00000522614 776 ntTSL 5 BASIC18.85■□□□□ 0.61
PACS1Q6VY07 TARBP2-220ENST00000552857 916 ntTSL 5 BASIC18.85■□□□□ 0.61
PACS1Q6VY07 DET1-205ENST00000558413 583 ntTSL 4 BASIC18.85■□□□□ 0.61
PACS1Q6VY07 GCHFR-205ENST00000559932 695 ntTSL 2 BASIC18.85■□□□□ 0.61
PACS1Q6VY07 AC068587.9-201ENST00000641814 219 ntBASIC18.85■□□□□ 0.61
PACS1Q6VY07 PKD2-201ENST00000237596 5056 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
PACS1Q6VY07 KMT5A-201ENST00000330479 3069 ntAPPRIS ALT2 TSL 1 (best) BASIC18.85■□□□□ 0.61
PACS1Q6VY07 SLC2A14-202ENST00000396589 2335 ntAPPRIS P3 TSL 1 (best) BASIC18.85■□□□□ 0.61
PACS1Q6VY07 MYO9A-214ENST00000566885 5111 ntTSL 1 (best) BASIC18.85■□□□□ 0.61
PACS1Q6VY07 DTX2-211ENST00000446600 2281 ntTSL 2 BASIC18.85■□□□□ 0.61
PACS1Q6VY07 PPP2R2C-206ENST00000507294 1667 ntTSL 2 BASIC18.85■□□□□ 0.61
PACS1Q6VY07 STK25-203ENST00000403346 2210 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
PACS1Q6VY07 ASNS-206ENST00000437628 1638 ntTSL 2 BASIC18.85■□□□□ 0.61
PACS1Q6VY07 EIF2B5-201ENST00000273783 2655 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
PACS1Q6VY07 RASA4B-201ENST00000306682 2589 ntTSL 1 (best) BASIC18.85■□□□□ 0.61
PACS1Q6VY07 PSMD8-210ENST00000620216 1538 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
PACS1Q6VY07 GUCY1A2-201ENST00000282249 3047 ntTSL 1 (best) BASIC18.84■□□□□ 0.61
PACS1Q6VY07 HSPB6-201ENST00000004982 1457 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
PACS1Q6VY07 ADCY5-202ENST00000462833 7311 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
PACS1Q6VY07 PTTG1IP-203ENST00000397887 2413 ntTSL 4 BASIC18.84■□□□□ 0.61
PACS1Q6VY07 AL133373.2-201ENST00000623187 2828 ntBASIC18.84■□□□□ 0.61
PACS1Q6VY07 RAB4A-205ENST00000618010 2799 ntTSL 3 BASIC18.84■□□□□ 0.61
PACS1Q6VY07 C6orf118-201ENST00000230301 1812 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
PACS1Q6VY07 TCP11-209ENST00000444780 1841 ntAPPRIS ALT2 TSL 2 BASIC18.84■□□□□ 0.61
PACS1Q6VY07 AC022916.1-201ENST00000590478 2658 ntTSL 2 BASIC18.84■□□□□ 0.61
PACS1Q6VY07 EEF1D-205ENST00000442189 2207 ntAPPRIS P4 TSL 1 (best) BASIC18.84■□□□□ 0.61
PACS1Q6VY07 PDLIM3-202ENST00000284770 1766 ntTSL 1 (best) BASIC18.84■□□□□ 0.61
PACS1Q6VY07 SLC29A4-202ENST00000396872 5685 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
PACS1Q6VY07 TFCP2-205ENST00000549867 1727 ntTSL 5 BASIC18.84■□□□□ 0.61
PACS1Q6VY07 MAP4K4-204ENST00000350198 7316 ntTSL 5 BASIC18.84■□□□□ 0.61
PACS1Q6VY07 CD70-201ENST00000245903 913 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
PACS1Q6VY07 GPATCH3-201ENST00000361720 2123 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
PACS1Q6VY07 UPK3B-203ENST00000394849 1041 ntAPPRIS ALT2 TSL 2 BASIC18.84■□□□□ 0.61
PACS1Q6VY07 ASPHD1-203ENST00000483405 1115 ntAPPRIS ALT2 TSL 3 BASIC18.84■□□□□ 0.61
PACS1Q6VY07 XYLT2-203ENST00000507602 2107 ntTSL 2 BASIC18.84■□□□□ 0.61
PACS1Q6VY07 AC004803.1-203ENST00000539259 501 ntTSL 2 BASIC18.84■□□□□ 0.61
PACS1Q6VY07 AP003071.4-201ENST00000562276 1284 ntBASIC18.84■□□□□ 0.61
PACS1Q6VY07 CKBP1-201ENST00000565489 1086 ntBASIC18.84■□□□□ 0.61
PACS1Q6VY07 IMPA2-208ENST00000589238 923 ntTSL 3 BASIC18.84■□□□□ 0.61
PACS1Q6VY07 PRKACA-209ENST00000590853 1101 ntTSL 5 BASIC18.84■□□□□ 0.61
PACS1Q6VY07 AC003005.1-201ENST00000601674 582 ntAPPRIS P5 TSL 2 BASIC18.84■□□□□ 0.61
PACS1Q6VY07 PTN-201ENST00000348225 1614 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
PACS1Q6VY07 PDE9A-209ENST00000398227 1606 ntTSL 1 (best) BASIC18.84■□□□□ 0.61
PACS1Q6VY07 TRIP4-201ENST00000261884 2045 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
PACS1Q6VY07 PTK6-201ENST00000217185 2401 ntTSL 2 BASIC18.84■□□□□ 0.61
PACS1Q6VY07 ABALON-201ENST00000629058 1903 ntBASIC18.84■□□□□ 0.61
PACS1Q6VY07 IMMP2L-202ENST00000405709 1522 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
PACS1Q6VY07 PGLYRP2-202ENST00000340880 2230 ntAPPRIS P2 TSL 1 (best) BASIC18.84■□□□□ 0.61
PACS1Q6VY07 EXOSC3-201ENST00000327304 1806 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
PACS1Q6VY07 AL499627.1-201ENST00000569373 2188 ntBASIC18.83■□□□□ 0.61
PACS1Q6VY07 MARK2-209ENST00000509502 2862 ntAPPRIS ALT2 TSL 2 BASIC18.83■□□□□ 0.61
PACS1Q6VY07 LGALS9-202ENST00000313648 1378 ntTSL 3 BASIC18.83■□□□□ 0.61
PACS1Q6VY07 AC096733.2-201ENST00000609937 1394 ntBASIC18.83■□□□□ 0.61
PACS1Q6VY07 AC005332.8-201ENST00000622750 2735 ntBASIC18.83■□□□□ 0.61
PACS1Q6VY07 CDK5R1-201ENST00000313401 4325 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.61
PACS1Q6VY07 MAP3K6-207ENST00000493901 4309 ntAPPRIS P1 TSL 5 BASIC18.83■□□□□ 0.61
PACS1Q6VY07 GAL3ST1-206ENST00000406955 1635 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.61
PACS1Q6VY07 EIF3J-201ENST00000261868 2569 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
PACS1Q6VY07 AP2M1-201ENST00000292807 1931 ntAPPRIS P4 TSL 5 BASIC18.83■□□□□ 0.6
PACS1Q6VY07 SYNE4-202ENST00000340477 1004 ntAPPRIS ALT2 TSL 1 (best) BASIC18.83■□□□□ 0.6
Retrieved 100 of 98,524 protein–RNA pairs in 21.6 ms