Protein–RNA interactions for Protein: Q6PCD5

RFWD3, E3 ubiquitin-protein ligase RFWD3, humanhuman

Predictions only

Length 774 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RFWD3Q6PCD5 HNRNPUL1-203ENST00000378215 2864 ntTSL 2 BASIC19.43■□□□□ 0.7
RFWD3Q6PCD5 RPRM-201ENST00000325926 1471 ntAPPRIS P1 BASIC19.43■□□□□ 0.7
RFWD3Q6PCD5 TMEM214-201ENST00000238788 2990 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
RFWD3Q6PCD5 TGFBR1-201ENST00000374990 5720 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
RFWD3Q6PCD5 FAM222A-202ENST00000538780 3294 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
RFWD3Q6PCD5 KLK14-201ENST00000156499 1060 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
RFWD3Q6PCD5 MRPL52-201ENST00000311892 1042 ntTSL 3 BASIC19.43■□□□□ 0.7
RFWD3Q6PCD5 RASGRP2-205ENST00000377489 583 ntTSL 3 BASIC19.43■□□□□ 0.7
RFWD3Q6PCD5 AL109797.1-201ENST00000452501 835 ntTSL 2 BASIC19.43■□□□□ 0.7
RFWD3Q6PCD5 ELOVL2-AS1-202ENST00000456616 903 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
RFWD3Q6PCD5 NDUFV2-207ENST00000497577 868 ntTSL 2 BASIC19.43■□□□□ 0.7
RFWD3Q6PCD5 AC009185.1-201ENST00000517634 911 ntTSL 3 BASIC19.43■□□□□ 0.7
RFWD3Q6PCD5 LINC01024-205ENST00000521563 939 ntTSL 3 BASIC19.43■□□□□ 0.7
RFWD3Q6PCD5 ABHD14B-208ENST00000525795 980 ntAPPRIS P1 TSL 3 BASIC19.43■□□□□ 0.7
RFWD3Q6PCD5 PNMA8A-203ENST00000602246 572 ntAPPRIS ALT2 TSL 4 BASIC19.43■□□□□ 0.7
RFWD3Q6PCD5 AL445228.2-201ENST00000605589 952 ntBASIC19.43■□□□□ 0.7
RFWD3Q6PCD5 AC011558.1-201ENST00000623459 338 ntBASIC19.43■□□□□ 0.7
RFWD3Q6PCD5 RNF187-203ENST00000639044 708 ntAPPRIS P2 TSL 1 (best) BASIC19.43■□□□□ 0.7
RFWD3Q6PCD5 TRPM4-213ENST00000599628 1829 ntTSL 2 BASIC19.43■□□□□ 0.7
RFWD3Q6PCD5 AC036111.1-201ENST00000533973 1582 ntBASIC19.43■□□□□ 0.7
RFWD3Q6PCD5 EVX2-201ENST00000308618 4203 ntAPPRIS P1 TSL 5 BASIC19.43■□□□□ 0.7
RFWD3Q6PCD5 CIRBP-201ENST00000320936 1328 ntAPPRIS P3 TSL 1 (best) BASIC19.43■□□□□ 0.7
RFWD3Q6PCD5 CIRBP-207ENST00000586472 1303 ntAPPRIS P3 TSL 3 BASIC19.43■□□□□ 0.7
RFWD3Q6PCD5 RIMBP3-201ENST00000619918 6105 ntAPPRIS P1 BASIC19.43■□□□□ 0.7
RFWD3Q6PCD5 AL512353.2-201ENST00000448759 1962 ntBASIC19.43■□□□□ 0.7
RFWD3Q6PCD5 NR2F1-205ENST00000615873 1427 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
RFWD3Q6PCD5 SLC2A11-204ENST00000398356 2388 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
RFWD3Q6PCD5 C19orf25-207ENST00000588871 2128 ntTSL 5 BASIC19.42■□□□□ 0.7
RFWD3Q6PCD5 C15orf56-202ENST00000623360 2129 ntTSL 2 BASIC19.42■□□□□ 0.7
RFWD3Q6PCD5 OXT-201ENST00000217386 513 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
RFWD3Q6PCD5 PIEZO1-202ENST00000327397 1246 ntTSL 2 BASIC19.42■□□□□ 0.7
RFWD3Q6PCD5 PRICKLE4-202ENST00000394260 1035 ntAPPRIS ALT2 TSL 2 BASIC19.42■□□□□ 0.7
RFWD3Q6PCD5 PRICKLE4-203ENST00000394263 1155 ntAPPRIS P2 TSL 5 BASIC19.42■□□□□ 0.7
RFWD3Q6PCD5 KRT18P35-201ENST00000510488 1269 ntBASIC19.42■□□□□ 0.7
RFWD3Q6PCD5 AP006621.4-201ENST00000527021 532 ntTSL 5 BASIC19.42■□□□□ 0.7
RFWD3Q6PCD5 CYB561D2-210ENST00000607121 1004 ntTSL 2 BASIC19.42■□□□□ 0.7
RFWD3Q6PCD5 ART1-201ENST00000250693 1312 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
RFWD3Q6PCD5 RBM42-201ENST00000262633 1680 ntAPPRIS P2 TSL 1 (best) BASIC19.42■□□□□ 0.7
RFWD3Q6PCD5 CDK13-202ENST00000340829 5066 ntAPPRIS ALT1 TSL 1 (best) BASIC19.42■□□□□ 0.7
RFWD3Q6PCD5 ATF5-201ENST00000423777 2069 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
RFWD3Q6PCD5 ARMC6-220ENST00000546344 1814 ntTSL 2 BASIC19.41■□□□□ 0.7
RFWD3Q6PCD5 DOK4-218ENST00000569548 1848 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
RFWD3Q6PCD5 SLC37A2-203ENST00000403796 2910 ntAPPRIS ALT1 TSL 2 BASIC19.41■□□□□ 0.7
RFWD3Q6PCD5 OGFOD2-205ENST00000454694 1488 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
RFWD3Q6PCD5 PACSIN2-203ENST00000402229 1883 ntAPPRIS P1 TSL 5 BASIC19.41■□□□□ 0.7
RFWD3Q6PCD5 NECTIN3-211ENST00000493615 1876 ntAPPRIS ALT2 TSL 2 BASIC19.41■□□□□ 0.7
RFWD3Q6PCD5 TBC1D19-201ENST00000264866 2263 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
RFWD3Q6PCD5 RCC2P3-201ENST00000418112 1537 ntBASIC19.41■□□□□ 0.7
RFWD3Q6PCD5 KRT81-201ENST00000327741 1929 ntAPPRIS P2 TSL 1 (best) BASIC19.41■□□□□ 0.7
RFWD3Q6PCD5 FAM90A1-201ENST00000307435 2342 ntAPPRIS P1 TSL 2 BASIC19.41■□□□□ 0.7
RFWD3Q6PCD5 WIPI1-202ENST00000546360 1575 ntTSL 2 BASIC19.41■□□□□ 0.7
RFWD3Q6PCD5 TMEM191A-208ENST00000450925 1961 ntTSL 2 BASIC19.41■□□□□ 0.7
RFWD3Q6PCD5 EPB41L4B-201ENST00000374557 4006 ntAPPRIS ALT2 TSL 1 (best) BASIC19.41■□□□□ 0.7
RFWD3Q6PCD5 MMP28-204ENST00000615136 2033 ntAPPRIS ALT2 TSL 1 (best) BASIC19.41■□□□□ 0.7
RFWD3Q6PCD5 SLC16A3-221ENST00000617373 2048 ntAPPRIS P1 TSL 5 BASIC19.41■□□□□ 0.7
RFWD3Q6PCD5 SLC16A3-222ENST00000619321 2015 ntAPPRIS P1 TSL 5 BASIC19.41■□□□□ 0.7
RFWD3Q6PCD5 AZU1-201ENST00000233997 908 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
RFWD3Q6PCD5 ILF2-202ENST00000368681 726 ntTSL 2 BASIC19.41■□□□□ 0.7
RFWD3Q6PCD5 MAGI2-AS3-203ENST00000424477 520 ntTSL 4 BASIC19.41■□□□□ 0.7
RFWD3Q6PCD5 HAGLR-204ENST00000425005 623 ntTSL 3 BASIC19.41■□□□□ 0.7
RFWD3Q6PCD5 MCCD1P1-208ENST00000445732 328 ntBASIC19.41■□□□□ 0.7
RFWD3Q6PCD5 AC079385.1-202ENST00000549203 569 ntTSL 4 BASIC19.41■□□□□ 0.7
RFWD3Q6PCD5 ULK4P3-205ENST00000568486 1158 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
RFWD3Q6PCD5 BAG3-201ENST00000369085 2571 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
RFWD3Q6PCD5 IGLON5-201ENST00000270642 2606 ntAPPRIS P1 TSL 5 BASIC19.41■□□□□ 0.7
RFWD3Q6PCD5 CYSTM1-201ENST00000261811 1336 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
RFWD3Q6PCD5 SEMA6D-205ENST00000389425 2318 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
RFWD3Q6PCD5 GPR142-201ENST00000335666 1437 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
RFWD3Q6PCD5 MCRS1-202ENST00000357123 1428 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
RFWD3Q6PCD5 MRPL3-202ENST00000425847 1457 ntTSL 2 BASIC19.41■□□□□ 0.7
RFWD3Q6PCD5 TMPRSS5-209ENST00000544634 1524 ntTSL 2 BASIC19.41■□□□□ 0.7
RFWD3Q6PCD5 PKN1-201ENST00000242783 3069 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
RFWD3Q6PCD5 SMPD3-203ENST00000563226 2093 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
RFWD3Q6PCD5 RAB7A-201ENST00000265062 2244 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
RFWD3Q6PCD5 UBE2I-203ENST00000397514 2976 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
RFWD3Q6PCD5 WDSUB1-203ENST00000392796 1812 ntAPPRIS P1 TSL 2 BASIC19.4■□□□□ 0.7
RFWD3Q6PCD5 MPG-201ENST00000219431 1193 ntAPPRIS P4 TSL 3 BASIC19.4■□□□□ 0.7
RFWD3Q6PCD5 TMEM160-201ENST00000253047 663 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
RFWD3Q6PCD5 ANKRD20A18P-201ENST00000359341 492 ntBASIC19.4■□□□□ 0.7
RFWD3Q6PCD5 LINC01385-201ENST00000512310 780 ntTSL 4 BASIC19.4■□□□□ 0.7
RFWD3Q6PCD5 NDUFB10-202ENST00000543683 830 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
RFWD3Q6PCD5 NME3-204ENST00000563498 920 ntTSL 2 BASIC19.4■□□□□ 0.7
RFWD3Q6PCD5 AL441883.1-201ENST00000566170 1045 ntBASIC19.4■□□□□ 0.7
RFWD3Q6PCD5 ELAC2-212ENST00000578071 579 ntTSL 4 BASIC19.4■□□□□ 0.7
RFWD3Q6PCD5 NTF6B-201ENST00000591913 560 ntBASIC19.4■□□□□ 0.7
RFWD3Q6PCD5 AC140113.3-201ENST00000605663 199 ntBASIC19.4■□□□□ 0.7
RFWD3Q6PCD5 ADORA1-208ENST00000618295 862 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
RFWD3Q6PCD5 AL590326.2-201ENST00000625139 305 ntBASIC19.4■□□□□ 0.7
RFWD3Q6PCD5 NDRG2-227ENST00000554143 1980 ntAPPRIS ALT1 TSL 2 BASIC19.4■□□□□ 0.7
RFWD3Q6PCD5 EDEM1-204ENST00000445686 1363 ntTSL 2 BASIC19.4■□□□□ 0.7
RFWD3Q6PCD5 SYT8-202ENST00000381968 1424 ntAPPRIS P2 TSL 5 BASIC19.4■□□□□ 0.7
RFWD3Q6PCD5 PODXL2-201ENST00000342480 2186 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
RFWD3Q6PCD5 PARS2-201ENST00000371279 2347 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
RFWD3Q6PCD5 HAUS4-218ENST00000555986 1626 ntTSL 5 BASIC19.4■□□□□ 0.7
RFWD3Q6PCD5 POLR3E-209ENST00000564209 2464 ntTSL 2 BASIC19.4■□□□□ 0.7
RFWD3Q6PCD5 PROB1-201ENST00000434752 5122 ntAPPRIS P1 BASIC19.39■□□□□ 0.7
RFWD3Q6PCD5 KCTD15-202ENST00000430256 2555 ntAPPRIS P1 TSL 2 BASIC19.39■□□□□ 0.7
RFWD3Q6PCD5 ADORA2A-213ENST00000610595 2736 ntAPPRIS P1 TSL 2 BASIC19.39■□□□□ 0.7
RFWD3Q6PCD5 AL138781.2-201ENST00000617896 1843 ntBASIC19.39■□□□□ 0.7
RFWD3Q6PCD5 PRSS12-201ENST00000296498 4809 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.7
Retrieved 100 of 98,524 protein–RNA pairs in 24.9 ms