Protein–RNA interactions for Protein: Q68DV7

RNF43, E3 ubiquitin-protein ligase RNF43, humanhuman

Predictions only

Length 783 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNF43Q68DV7 SEPT9-246ENST00000592951 1793 ntAPPRIS ALT2 TSL 2 BASIC19.55■□□□□ 0.72
RNF43Q68DV7 PPP2R2B-203ENST00000394411 2071 ntAPPRIS P1 TSL 2 BASIC19.55■□□□□ 0.72
RNF43Q68DV7 PGLYRP2-202ENST00000340880 2230 ntAPPRIS P2 TSL 1 (best) BASIC19.55■□□□□ 0.72
RNF43Q68DV7 AC135050.7-201ENST00000624508 2218 ntBASIC19.55■□□□□ 0.72
RNF43Q68DV7 AL445433.2-201ENST00000425113 2544 ntTSL 2 BASIC19.55■□□□□ 0.72
RNF43Q68DV7 APAF1-210ENST00000551964 5444 ntAPPRIS P4 TSL 1 (best) BASIC19.55■□□□□ 0.72
RNF43Q68DV7 UQCRQ-201ENST00000378665 586 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
RNF43Q68DV7 KRT18P48-201ENST00000434763 852 ntBASIC19.55■□□□□ 0.72
RNF43Q68DV7 WDR45-218ENST00000473974 1077 ntTSL 5 BASIC19.55■□□□□ 0.72
RNF43Q68DV7 TFCP2-204ENST00000548115 1862 ntTSL 5 BASIC19.55■□□□□ 0.72
RNF43Q68DV7 DCTN5-208ENST00000568589 772 ntTSL 2 BASIC19.55■□□□□ 0.72
RNF43Q68DV7 ZNF575-205ENST00000601282 1086 ntAPPRIS P1 TSL 2 BASIC19.55■□□□□ 0.72
RNF43Q68DV7 UBE2E3-209ENST00000602710 1556 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
RNF43Q68DV7 NFATC1-217ENST00000591814 4819 ntAPPRIS ALT2 TSL 1 (best) BASIC19.55■□□□□ 0.72
RNF43Q68DV7 AGAP4-201ENST00000311652 2715 ntAPPRIS ALT2 TSL 1 (best) BASIC19.55■□□□□ 0.72
RNF43Q68DV7 PDE6B-202ENST00000429163 2120 ntTSL 2 BASIC19.55■□□□□ 0.72
RNF43Q68DV7 AC107464.1-203ENST00000468356 2120 ntTSL 1 (best) BASIC19.55■□□□□ 0.72
RNF43Q68DV7 STARD3-209ENST00000544210 1666 ntTSL 2 BASIC19.55■□□□□ 0.72
RNF43Q68DV7 MAFF-207ENST00000538999 2365 ntTSL 2 BASIC19.55■□□□□ 0.72
RNF43Q68DV7 EWSR1-207ENST00000406548 2207 ntAPPRIS ALT2 TSL 1 (best) BASIC19.55■□□□□ 0.72
RNF43Q68DV7 RAI14-201ENST00000265109 5092 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
RNF43Q68DV7 FAM217A-208ENST00000639338 1929 ntTSL 5 BASIC19.55■□□□□ 0.72
RNF43Q68DV7 IFNLR1-202ENST00000327575 1476 ntAPPRIS ALT2 TSL 1 (best) BASIC19.54■□□□□ 0.72
RNF43Q68DV7 AC011416.4-201ENST00000639283 2195 ntTSL 5 BASIC19.54■□□□□ 0.72
RNF43Q68DV7 ALDOA-212ENST00000564546 2104 ntAPPRIS P2 TSL 1 (best) BASIC19.54■□□□□ 0.72
RNF43Q68DV7 GSTZ1-204ENST00000393734 1424 ntTSL 5 BASIC19.54■□□□□ 0.72
RNF43Q68DV7 PTPN12-201ENST00000248594 3406 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
RNF43Q68DV7 LCE3C-201ENST00000333881 425 ntAPPRIS P1 BASIC19.54■□□□□ 0.72
RNF43Q68DV7 CCK-201ENST00000334681 830 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
RNF43Q68DV7 MUC1-204ENST00000343256 648 ntTSL 1 (best) BASIC19.54■□□□□ 0.72
RNF43Q68DV7 ISCU-202ENST00000392807 1069 ntTSL 1 (best) BASIC19.54■□□□□ 0.72
RNF43Q68DV7 ISCU-203ENST00000431221 799 ntTSL 2 BASIC19.54■□□□□ 0.72
RNF43Q68DV7 AP003041.3-201ENST00000527151 707 ntBASIC19.54■□□□□ 0.72
RNF43Q68DV7 CYB561D2-210ENST00000607121 1004 ntTSL 2 BASIC19.54■□□□□ 0.72
RNF43Q68DV7 AC020916.1-201ENST00000587762 1774 ntBASIC19.54■□□□□ 0.72
RNF43Q68DV7 MLF2-202ENST00000435120 1379 ntAPPRIS P1 TSL 2 BASIC19.54■□□□□ 0.72
RNF43Q68DV7 CNNM3-202ENST00000377060 3308 ntTSL 2 BASIC19.54■□□□□ 0.72
RNF43Q68DV7 LRPPRC-202ENST00000409659 1610 ntTSL 5 BASIC19.54■□□□□ 0.72
RNF43Q68DV7 MON1A-202ENST00000417270 2527 ntAPPRIS ALT2 TSL 5 BASIC19.54■□□□□ 0.72
RNF43Q68DV7 HAUS4-217ENST00000555367 1454 ntTSL 5 BASIC19.54■□□□□ 0.72
RNF43Q68DV7 AC104581.1-202ENST00000635932 2618 ntBASIC19.54■□□□□ 0.72
RNF43Q68DV7 KMT5B-206ENST00000405515 2869 ntTSL 5 BASIC19.54■□□□□ 0.72
RNF43Q68DV7 NR1H2-201ENST00000253727 1998 ntAPPRIS P2 TSL 1 (best) BASIC19.53■□□□□ 0.72
RNF43Q68DV7 ISOC2-203ENST00000438389 1566 ntTSL 2 BASIC19.53■□□□□ 0.72
RNF43Q68DV7 MUTYH-203ENST00000372098 1839 ntTSL 1 (best) BASIC19.53■□□□□ 0.72
RNF43Q68DV7 MUTYH-204ENST00000372104 1823 ntAPPRIS ALT2 TSL 1 (best) BASIC19.53■□□□□ 0.72
RNF43Q68DV7 MUTYH-205ENST00000372110 1809 ntTSL 1 (best) BASIC19.53■□□□□ 0.72
RNF43Q68DV7 PTPA-206ENST00000358994 2664 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
RNF43Q68DV7 UBE2K-203ENST00000445950 2175 ntTSL 1 (best) BASIC19.53■□□□□ 0.72
RNF43Q68DV7 GORASP1-206ENST00000422110 2523 ntTSL 2 BASIC19.53■□□□□ 0.72
RNF43Q68DV7 PNPO-201ENST00000225573 2256 ntTSL 1 (best) BASIC19.53■□□□□ 0.72
RNF43Q68DV7 EMX2-203ENST00000553456 2897 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
RNF43Q68DV7 IGLON5-201ENST00000270642 2606 ntAPPRIS P1 TSL 5 BASIC19.53■□□□□ 0.72
RNF43Q68DV7 FGF8-201ENST00000320185 799 ntAPPRIS P4 TSL 1 (best) BASIC19.53■□□□□ 0.72
RNF43Q68DV7 PTGDS-202ENST00000371625 807 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
RNF43Q68DV7 KRTAP5-11-201ENST00000398530 1021 ntAPPRIS P2 BASIC19.53■□□□□ 0.72
RNF43Q68DV7 AC007731.5-201ENST00000429594 644 ntAPPRIS P1 TSL 5 BASIC19.53■□□□□ 0.72
RNF43Q68DV7 C16orf91-201ENST00000442039 978 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
RNF43Q68DV7 MUC1-212ENST00000457295 1161 ntAPPRIS ALT2 TSL 2 BASIC19.53■□□□□ 0.72
RNF43Q68DV7 CDKN2AIPNL-202ENST00000458198 1223 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
RNF43Q68DV7 MOK-234ENST00000524370 1165 ntTSL 1 (best) BASIC19.53■□□□□ 0.72
RNF43Q68DV7 AL158151.3-201ENST00000599172 696 ntTSL 5 BASIC19.53■□□□□ 0.72
RNF43Q68DV7 AC022154.1-201ENST00000600303 766 ntTSL 3 BASIC19.53■□□□□ 0.72
RNF43Q68DV7 AC011247.3-202ENST00000605062 570 ntTSL 4 BASIC19.53■□□□□ 0.72
RNF43Q68DV7 AC027682.6-202ENST00000621378 795 ntTSL 2 BASIC19.53■□□□□ 0.72
RNF43Q68DV7 PITPNB-211ENST00000634017 1017 ntAPPRIS ALT1 TSL 2 BASIC19.53■□□□□ 0.72
RNF43Q68DV7 URI1-202ENST00000392271 3444 ntAPPRIS P3 TSL 1 (best) BASIC19.53■□□□□ 0.72
RNF43Q68DV7 CHMP4A-201ENST00000347519 1393 ntTSL 1 (best) BASIC19.53■□□□□ 0.72
RNF43Q68DV7 GTPBP2-202ENST00000307126 2933 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
RNF43Q68DV7 MRPL3-201ENST00000264995 1706 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
RNF43Q68DV7 ABI3-202ENST00000419580 1718 ntAPPRIS P1 TSL 5 BASIC19.53■□□□□ 0.72
RNF43Q68DV7 GOLGA6L5P-202ENST00000515341 1828 ntBASIC19.53■□□□□ 0.72
RNF43Q68DV7 SERPINF2-202ENST00000382061 2265 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
RNF43Q68DV7 TM9SF1-203ENST00000524835 1938 ntTSL 2 BASIC19.53■□□□□ 0.72
RNF43Q68DV7 PODN-203ENST00000395871 2744 ntTSL 5 BASIC19.53■□□□□ 0.72
RNF43Q68DV7 SLC25A51-202ENST00000377716 1691 ntAPPRIS P1 TSL 3 BASIC19.52■□□□□ 0.72
RNF43Q68DV7 TEX21P-204ENST00000641479 1693 ntBASIC19.52■□□□□ 0.72
RNF43Q68DV7 SYBU-232ENST00000533171 2498 ntAPPRIS ALT2 TSL 2 BASIC19.52■□□□□ 0.72
RNF43Q68DV7 ZNF487-202ENST00000437590 2111 ntTSL 2 BASIC19.52■□□□□ 0.72
RNF43Q68DV7 LONP1-215ENST00000593119 2918 ntTSL 2 BASIC19.52■□□□□ 0.72
RNF43Q68DV7 PDIA5-201ENST00000316218 1799 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
RNF43Q68DV7 TEPSIN-213ENST00000637944 1782 ntAPPRIS ALT2 TSL 5 BASIC19.52■□□□□ 0.72
RNF43Q68DV7 TMEM110-MUSTN1-202ENST00000504329 1405 ntAPPRIS P1 TSL 5 BASIC19.52■□□□□ 0.72
RNF43Q68DV7 PDE8A-202ENST00000339708 2663 ntAPPRIS ALT2 TSL 1 (best) BASIC19.52■□□□□ 0.72
RNF43Q68DV7 NADK-201ENST00000341426 3235 ntAPPRIS P3 TSL 2 BASIC19.52■□□□□ 0.72
RNF43Q68DV7 ZNF419-204ENST00000415379 2186 ntAPPRIS ALT2 TSL 2 BASIC19.52■□□□□ 0.72
RNF43Q68DV7 CCND3-204ENST00000414200 1724 ntTSL 2 BASIC19.52■□□□□ 0.72
RNF43Q68DV7 ANKS3-202ENST00000446014 2265 ntTSL 5 BASIC19.52■□□□□ 0.72
RNF43Q68DV7 DTX2-211ENST00000446600 2281 ntTSL 2 BASIC19.52■□□□□ 0.72
RNF43Q68DV7 SCGB3A1-201ENST00000292641 521 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
RNF43Q68DV7 MRPL52-201ENST00000311892 1042 ntTSL 3 BASIC19.52■□□□□ 0.72
RNF43Q68DV7 SWI5-201ENST00000320188 980 ntAPPRIS P3 TSL 1 (best) BASIC19.52■□□□□ 0.72
RNF43Q68DV7 AIF1L-203ENST00000372298 849 ntTSL 3 BASIC19.52■□□□□ 0.72
RNF43Q68DV7 CHCHD3-203ENST00000448878 1038 ntTSL 5 BASIC19.52■□□□□ 0.72
RNF43Q68DV7 RAP1B-228ENST00000542145 1060 ntTSL 2 BASIC19.52■□□□□ 0.72
RNF43Q68DV7 AC005606.2-201ENST00000564438 614 ntTSL 2 BASIC19.52■□□□□ 0.72
RNF43Q68DV7 SREBF2-209ENST00000612482 5365 ntTSL 5 BASIC19.52■□□□□ 0.72
RNF43Q68DV7 GMPPA-203ENST00000358215 1823 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
RNF43Q68DV7 EIF2B1-201ENST00000424014 2477 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
RNF43Q68DV7 GBGT1-208ENST00000540636 1934 ntTSL 2 BASIC19.52■□□□□ 0.72
Retrieved 100 of 98,524 protein–RNA pairs in 25.9 ms