Protein–RNA interactions for Protein: Q5VT98

PRAMEF20, PRAME family member 20, humanhuman

Predictions only

Length 475 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PRAMEF20Q5VT98 LONRF3-202ENST00000371628 2550 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
PRAMEF20Q5VT98 SLC27A3-214ENST00000624995 2413 ntAPPRIS P2 TSL 1 (best) BASIC17.08■□□□□ 0.32
PRAMEF20Q5VT98 EGFR-202ENST00000342916 2239 ntTSL 1 (best) BASIC17.08■□□□□ 0.32
PRAMEF20Q5VT98 SMPD1-203ENST00000527275 2188 ntAPPRIS P3 TSL 2 BASIC17.08■□□□□ 0.32
PRAMEF20Q5VT98 UTP18-201ENST00000225298 1894 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
PRAMEF20Q5VT98 MAPK8IP3-216ENST00000610761 5626 ntAPPRIS ALT1 TSL 1 (best) BASIC17.07■□□□□ 0.32
PRAMEF20Q5VT98 EXOSC3-201ENST00000327304 1806 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
PRAMEF20Q5VT98 YBX3-201ENST00000228251 1796 ntAPPRIS P3 TSL 1 (best) BASIC17.07■□□□□ 0.32
PRAMEF20Q5VT98 ACVR1B-205ENST00000541224 1791 ntTSL 2 BASIC17.07■□□□□ 0.32
PRAMEF20Q5VT98 MTSS1-203ENST00000431961 1711 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
PRAMEF20Q5VT98 CD19-206ENST00000567541 1707 ntAPPRIS ALT2 TSL 1 (best) BASIC17.07■□□□□ 0.32
PRAMEF20Q5VT98 PSRC1-202ENST00000369904 1584 ntAPPRIS ALT2 TSL 1 (best) BASIC17.07■□□□□ 0.32
PRAMEF20Q5VT98 HOXC13-201ENST00000243056 2423 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
PRAMEF20Q5VT98 UMOD-203ENST00000396138 2399 ntAPPRIS ALT2 TSL 5 BASIC17.07■□□□□ 0.32
PRAMEF20Q5VT98 PPFIA1-202ENST00000389547 4133 ntAPPRIS ALT1 TSL 1 (best) BASIC17.07■□□□□ 0.32
PRAMEF20Q5VT98 LTBP3-202ENST00000322147 4046 ntAPPRIS P3 TSL 1 (best) BASIC17.07■□□□□ 0.32
PRAMEF20Q5VT98 KLHDC10-201ENST00000335420 6437 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
PRAMEF20Q5VT98 ST6GALNAC4P1-201ENST00000435385 499 ntBASIC17.07■□□□□ 0.32
PRAMEF20Q5VT98 KRT18P23-201ENST00000435622 1283 ntBASIC17.07■□□□□ 0.32
PRAMEF20Q5VT98 AL162457.2-201ENST00000447909 937 ntTSL 3 BASIC17.07■□□□□ 0.32
PRAMEF20Q5VT98 AL136307.1-201ENST00000454882 411 ntTSL 2 BASIC17.07■□□□□ 0.32
PRAMEF20Q5VT98 RNF146-204ENST00000476956 884 ntTSL 2 BASIC17.07■□□□□ 0.32
PRAMEF20Q5VT98 SNX5-210ENST00000481323 562 ntTSL 3 BASIC17.07■□□□□ 0.32
PRAMEF20Q5VT98 LY6E-210ENST00000521182 1079 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
PRAMEF20Q5VT98 FAM104A-205ENST00000581110 512 ntTSL 2 BASIC17.07■□□□□ 0.32
PRAMEF20Q5VT98 AC010422.3-201ENST00000597692 838 ntAPPRIS P1 TSL 2 BASIC17.07■□□□□ 0.32
PRAMEF20Q5VT98 NFKBIZ-201ENST00000326151 2058 ntTSL 2 BASIC17.07■□□□□ 0.32
PRAMEF20Q5VT98 EOMES-202ENST00000449599 2829 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
PRAMEF20Q5VT98 ZNF420-201ENST00000304239 1945 ntTSL 2 BASIC17.07■□□□□ 0.32
PRAMEF20Q5VT98 CYP21A2-222ENST00000435122 1914 ntTSL 2 BASIC17.07■□□□□ 0.32
PRAMEF20Q5VT98 SLC25A20-201ENST00000319017 1879 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
PRAMEF20Q5VT98 PDE9A-206ENST00000380328 1875 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
PRAMEF20Q5VT98 ARHGEF28-204ENST00000437974 5792 ntAPPRIS P3 TSL 1 (best) BASIC17.07■□□□□ 0.32
PRAMEF20Q5VT98 LRRC4B-202ENST00000599957 3019 ntAPPRIS P1 TSL 3 BASIC17.07■□□□□ 0.32
PRAMEF20Q5VT98 STX6-201ENST00000258301 4851 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
PRAMEF20Q5VT98 ANKIB1-201ENST00000265742 6081 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
PRAMEF20Q5VT98 L3HYPDH-201ENST00000247194 1527 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
PRAMEF20Q5VT98 PLPP4-202ENST00000398250 1521 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
PRAMEF20Q5VT98 TMEM106C-202ENST00000429772 1515 ntAPPRIS P1 TSL 2 BASIC17.06■□□□□ 0.32
PRAMEF20Q5VT98 TMEM176A-210ENST00000484928 1530 ntAPPRIS P2 TSL 5 BASIC17.06■□□□□ 0.32
PRAMEF20Q5VT98 BDKRB1-202ENST00000553356 1526 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
PRAMEF20Q5VT98 CCDC151-201ENST00000356392 2107 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
PRAMEF20Q5VT98 PLCG1-AS1-201ENST00000454626 1462 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
PRAMEF20Q5VT98 SP9-201ENST00000394967 2554 ntAPPRIS P1 TSL 5 BASIC17.06■□□□□ 0.32
PRAMEF20Q5VT98 CPQ-201ENST00000220763 1947 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
PRAMEF20Q5VT98 AD000671.2-201ENST00000589807 1925 ntAPPRIS P1 TSL 2 BASIC17.06■□□□□ 0.32
PRAMEF20Q5VT98 CALHM2-201ENST00000260743 1859 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
PRAMEF20Q5VT98 SPAG16-209ENST00000447990 1330 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
PRAMEF20Q5VT98 TNPO2-203ENST00000450764 4993 ntAPPRIS ALT1 TSL 1 (best) BASIC17.06■□□□□ 0.32
PRAMEF20Q5VT98 SLMAP-201ENST00000295951 5433 ntAPPRIS P1 TSL 5 BASIC17.06■□□□□ 0.32
PRAMEF20Q5VT98 MED4-202ENST00000378586 931 ntAPPRIS ALT2 TSL 2 BASIC17.06■□□□□ 0.32
PRAMEF20Q5VT98 SDCBP2-203ENST00000381808 1261 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
PRAMEF20Q5VT98 MIR564-202ENST00000385049 94 ntBASIC17.06■□□□□ 0.32
PRAMEF20Q5VT98 SPDYE15P-201ENST00000424157 909 ntBASIC17.06■□□□□ 0.32
PRAMEF20Q5VT98 SAPCD2P2-201ENST00000431719 1174 ntBASIC17.06■□□□□ 0.32
PRAMEF20Q5VT98 GRAMD4P1-201ENST00000435181 1110 ntBASIC17.06■□□□□ 0.32
PRAMEF20Q5VT98 AC004080.5-201ENST00000498652 368 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
PRAMEF20Q5VT98 GRP-204ENST00000529320 824 ntAPPRIS ALT2 TSL 1 (best) BASIC17.06■□□□□ 0.32
PRAMEF20Q5VT98 YIPF2-209ENST00000590329 958 ntTSL 5 BASIC17.06■□□□□ 0.32
PRAMEF20Q5VT98 C16orf74-203ENST00000602675 744 ntAPPRIS ALT2 TSL 1 (best) BASIC17.06■□□□□ 0.32
PRAMEF20Q5VT98 C16orf74-206ENST00000602766 832 ntAPPRIS ALT2 TSL 3 BASIC17.06■□□□□ 0.32
PRAMEF20Q5VT98 AC243829.1-201ENST00000615128 1059 ntTSL 2 BASIC17.06■□□□□ 0.32
PRAMEF20Q5VT98 MXD3-202ENST00000427908 2269 ntTSL 2 BASIC17.06■□□□□ 0.32
PRAMEF20Q5VT98 LDHAL6A-202ENST00000396213 1716 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
PRAMEF20Q5VT98 TOX2-205ENST00000423191 1709 ntTSL 2 BASIC17.06■□□□□ 0.32
PRAMEF20Q5VT98 SETMAR-206ENST00000430981 1671 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
PRAMEF20Q5VT98 AC012615.6-201ENST00000593201 1697 ntTSL 2 BASIC17.06■□□□□ 0.32
PRAMEF20Q5VT98 ADORA2A-201ENST00000337539 2569 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
PRAMEF20Q5VT98 ZNF655-202ENST00000320583 1601 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
PRAMEF20Q5VT98 NEU4-202ENST00000391969 2526 ntAPPRIS P1 TSL 2 BASIC17.06■□□□□ 0.32
PRAMEF20Q5VT98 NAT16-201ENST00000300303 2935 ntAPPRIS P2 TSL 2 BASIC17.06■□□□□ 0.32
PRAMEF20Q5VT98 CPEB2-202ENST00000345451 2013 ntAPPRIS ALT2 TSL 1 (best) BASIC17.06■□□□□ 0.32
PRAMEF20Q5VT98 STX17-212ENST00000534052 2424 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
PRAMEF20Q5VT98 QKI-203ENST00000361752 9463 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
PRAMEF20Q5VT98 PCGF6-201ENST00000337211 1950 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
PRAMEF20Q5VT98 CCT5-214ENST00000515676 1997 ntTSL 2 BASIC17.06■□□□□ 0.32
PRAMEF20Q5VT98 NCF1B-201ENST00000423083 1516 ntTSL 2 BASIC17.06■□□□□ 0.32
PRAMEF20Q5VT98 NECTIN3-206ENST00000485303 3664 ntAPPRIS P3 TSL 1 (best) BASIC17.06■□□□□ 0.32
PRAMEF20Q5VT98 MAG-203ENST00000537831 2341 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
PRAMEF20Q5VT98 KLHDC4-227ENST00000622456 1422 ntTSL 5 BASIC17.05■□□□□ 0.32
PRAMEF20Q5VT98 AL357033.4-201ENST00000617703 1807 ntBASIC17.05■□□□□ 0.32
PRAMEF20Q5VT98 UNG-202ENST00000336865 2130 ntAPPRIS ALT2 TSL 1 (best) BASIC17.05■□□□□ 0.32
PRAMEF20Q5VT98 C7orf49-202ENST00000424142 1738 ntTSL 2 BASIC17.05■□□□□ 0.32
PRAMEF20Q5VT98 TULP1-208ENST00000614066 2084 ntAPPRIS ALT2 TSL 5 BASIC17.05■□□□□ 0.32
PRAMEF20Q5VT98 HIST2H2AB-201ENST00000331128 393 ntAPPRIS P1 BASIC17.05■□□□□ 0.32
PRAMEF20Q5VT98 COMTD1-201ENST00000372538 976 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
PRAMEF20Q5VT98 NFU1-202ENST00000394305 1058 ntTSL 5 BASIC17.05■□□□□ 0.32
PRAMEF20Q5VT98 AC114763.1-202ENST00000414911 867 ntTSL 3 BASIC17.05■□□□□ 0.32
PRAMEF20Q5VT98 MALL-203ENST00000427178 1070 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
PRAMEF20Q5VT98 SGO1-208ENST00000437051 1187 ntAPPRIS ALT2 TSL 1 (best) BASIC17.05■□□□□ 0.32
PRAMEF20Q5VT98 LINC00599-204ENST00000521242 716 ntTSL 3 BASIC17.05■□□□□ 0.32
PRAMEF20Q5VT98 CD81-212ENST00000526072 1172 ntTSL 5 BASIC17.05■□□□□ 0.32
PRAMEF20Q5VT98 C12orf76-204ENST00000547573 607 ntTSL 3 BASIC17.05■□□□□ 0.32
PRAMEF20Q5VT98 IFI27L2-206ENST00000556727 556 ntTSL 3 BASIC17.05■□□□□ 0.32
PRAMEF20Q5VT98 ELAVL1-202ENST00000593807 856 ntTSL 3 BASIC17.05■□□□□ 0.32
PRAMEF20Q5VT98 AC004076.1-201ENST00000596831 664 ntAPPRIS P1 TSL 2 BASIC17.05■□□□□ 0.32
PRAMEF20Q5VT98 AC083906.6-201ENST00000641366 219 ntBASIC17.05■□□□□ 0.32
PRAMEF20Q5VT98 CHRNA10-201ENST00000250699 1945 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
PRAMEF20Q5VT98 PRDX3-201ENST00000298510 1591 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
PRAMEF20Q5VT98 DIO3OS-212ENST00000557661 1937 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
Retrieved 100 of 98,524 protein–RNA pairs in 29.3 ms