Protein–RNA interactions for Protein: Q5H8C1

FREM1, FRAS1-related extracellular matrix protein 1, humanhuman

Predictions only

Length 2,179 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
FREM1Q5H8C1 ARSA-203ENST00000395619 1824 ntAPPRIS P1 TSL 5 BASIC16.37■□□□□ 0.21
FREM1Q5H8C1 HOXC10-201ENST00000303460 1936 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
FREM1Q5H8C1 FAM86B2-202ENST00000309608 806 ntTSL 3 BASIC16.37■□□□□ 0.21
FREM1Q5H8C1 SURF4-206ENST00000485435 1206 ntTSL 1 (best) BASIC16.37■□□□□ 0.21
FREM1Q5H8C1 CCNG1-211ENST00000512163 919 ntTSL 2 BASIC16.37■□□□□ 0.21
FREM1Q5H8C1 BVES-AS1-203ENST00000580511 853 ntTSL 5 BASIC16.37■□□□□ 0.21
FREM1Q5H8C1 AC024243.1-201ENST00000609234 778 ntBASIC16.37■□□□□ 0.21
FREM1Q5H8C1 AL358472.4-201ENST00000633140 710 ntBASIC16.37■□□□□ 0.21
FREM1Q5H8C1 MYOZ3-203ENST00000517768 1451 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
FREM1Q5H8C1 PSRC1-202ENST00000369904 1584 ntAPPRIS ALT2 TSL 1 (best) BASIC16.37■□□□□ 0.21
FREM1Q5H8C1 INTS10-201ENST00000397977 2804 ntAPPRIS P1 TSL 2 BASIC16.37■□□□□ 0.21
FREM1Q5H8C1 SLC31A2-201ENST00000259392 1785 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
FREM1Q5H8C1 KMT5B-206ENST00000405515 2869 ntTSL 5 BASIC16.37■□□□□ 0.21
FREM1Q5H8C1 CASKIN2-205ENST00000581870 1612 ntTSL 2 BASIC16.37■□□□□ 0.21
FREM1Q5H8C1 FARSA-202ENST00000423140 1720 ntTSL 2 BASIC16.37■□□□□ 0.21
FREM1Q5H8C1 PFDN6-206ENST00000463584 1915 ntTSL 3 BASIC16.37■□□□□ 0.21
FREM1Q5H8C1 TTC3-203ENST00000399010 2115 ntTSL 5 BASIC16.37■□□□□ 0.21
FREM1Q5H8C1 CEP78-201ENST00000277082 2542 ntAPPRIS ALT2 TSL 2 BASIC16.37■□□□□ 0.21
FREM1Q5H8C1 SYN2-206ENST00000621198 2674 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
FREM1Q5H8C1 RBFOX1-204ENST00000422070 1684 ntTSL 2 BASIC16.37■□□□□ 0.21
FREM1Q5H8C1 FAM187B-201ENST00000324675 1184 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
FREM1Q5H8C1 AL161452.1-201ENST00000415062 1117 ntTSL 1 (best) BASIC16.37■□□□□ 0.21
FREM1Q5H8C1 CT47A4-201ENST00000415858 1298 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
FREM1Q5H8C1 CT47A9-201ENST00000417256 1298 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
FREM1Q5H8C1 CT47A6-201ENST00000419194 1298 ntAPPRIS P1 TSL 5 BASIC16.37■□□□□ 0.21
FREM1Q5H8C1 BX890604.1-205ENST00000425492 856 ntTSL 1 (best) BASIC16.37■□□□□ 0.21
FREM1Q5H8C1 CT47A10-201ENST00000430448 1298 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
FREM1Q5H8C1 DAP-202ENST00000432074 1048 ntTSL 2 BASIC16.37■□□□□ 0.21
FREM1Q5H8C1 CT47A5-201ENST00000439466 1298 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
FREM1Q5H8C1 CT47A3-201ENST00000441330 1298 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
FREM1Q5H8C1 CT47A8-201ENST00000457977 1298 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
FREM1Q5H8C1 AL671277.2-201ENST00000458060 996 ntBASIC16.37■□□□□ 0.21
FREM1Q5H8C1 CT47A2-201ENST00000458218 1298 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
FREM1Q5H8C1 TPM1-226ENST00000560959 925 ntTSL 2 BASIC16.37■□□□□ 0.21
FREM1Q5H8C1 AKTIP-212ENST00000570004 1162 ntAPPRIS P3 TSL 1 (best) BASIC16.37■□□□□ 0.21
FREM1Q5H8C1 AC009477.2-201ENST00000635976 171 ntAPPRIS P1 BASIC16.37■□□□□ 0.21
FREM1Q5H8C1 SPHK2-211ENST00000600537 2136 ntAPPRIS ALT2 TSL 2 BASIC16.37■□□□□ 0.21
FREM1Q5H8C1 AL360181.3-201ENST00000468317 1605 ntAPPRIS P1 TSL 5 BASIC16.36■□□□□ 0.21
FREM1Q5H8C1 FAM222A-202ENST00000538780 3294 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
FREM1Q5H8C1 FCER2-201ENST00000346664 1596 ntAPPRIS P2 TSL 1 (best) BASIC16.36■□□□□ 0.21
FREM1Q5H8C1 FCER2-205ENST00000597921 1560 ntAPPRIS P2 TSL 1 (best) BASIC16.36■□□□□ 0.21
FREM1Q5H8C1 HEBP2-201ENST00000367697 844 ntTSL 2 BASIC16.36■□□□□ 0.21
FREM1Q5H8C1 PDLIM7-205ENST00000393551 1226 ntTSL 1 (best) BASIC16.36■□□□□ 0.21
FREM1Q5H8C1 AC019068.1-202ENST00000483218 768 ntTSL 3 BASIC16.36■□□□□ 0.21
FREM1Q5H8C1 ZNF444P1-201ENST00000559497 298 ntBASIC16.36■□□□□ 0.21
FREM1Q5H8C1 CLN6-204ENST00000564752 900 ntTSL 3 BASIC16.36■□□□□ 0.21
FREM1Q5H8C1 MIR3917-201ENST00000580971 93 ntBASIC16.36■□□□□ 0.21
FREM1Q5H8C1 C16orf74-203ENST00000602675 744 ntAPPRIS ALT2 TSL 1 (best) BASIC16.36■□□□□ 0.21
FREM1Q5H8C1 C16orf74-206ENST00000602766 832 ntAPPRIS ALT2 TSL 3 BASIC16.36■□□□□ 0.21
FREM1Q5H8C1 ILKAP-212ENST00000622223 1088 ntTSL 1 (best) BASIC16.36■□□□□ 0.21
FREM1Q5H8C1 AP000550.4-202ENST00000639755 178 ntBASIC16.36■□□□□ 0.21
FREM1Q5H8C1 CSNK2A2-201ENST00000262506 1701 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
FREM1Q5H8C1 RGMB-207ENST00000513185 2052 ntAPPRIS ALT2 TSL 2 BASIC16.36■□□□□ 0.21
FREM1Q5H8C1 POLE2-202ENST00000539565 1792 ntTSL 1 (best) BASIC16.36■□□□□ 0.21
FREM1Q5H8C1 ENOPH1-201ENST00000273920 2025 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
FREM1Q5H8C1 AL391807.1-203ENST00000604392 2365 ntBASIC16.36■□□□□ 0.21
FREM1Q5H8C1 YPEL3-202ENST00000398841 1588 ntTSL 1 (best) BASIC16.36■□□□□ 0.21
FREM1Q5H8C1 VPS26B-202ENST00000525095 1558 ntAPPRIS P1 TSL 5 BASIC16.36■□□□□ 0.21
FREM1Q5H8C1 SPIRE2-201ENST00000378247 3235 ntAPPRIS P2 TSL 1 (best) BASIC16.36■□□□□ 0.21
FREM1Q5H8C1 SIKE1-201ENST00000060969 2190 ntAPPRIS P3 TSL 1 (best) BASIC16.36■□□□□ 0.21
FREM1Q5H8C1 AL357033.4-201ENST00000617703 1807 ntBASIC16.36■□□□□ 0.21
FREM1Q5H8C1 FAM50A-202ENST00000393600 1352 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
FREM1Q5H8C1 IGLL1-201ENST00000249053 716 ntTSL 1 (best) BASIC16.36■□□□□ 0.21
FREM1Q5H8C1 RPA2-201ENST00000313433 1237 ntTSL 1 (best) BASIC16.36■□□□□ 0.21
FREM1Q5H8C1 AURKAIP1-202ENST00000338338 1047 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
FREM1Q5H8C1 DMKN-208ENST00000424570 1293 ntAPPRIS ALT2 TSL 1 (best) BASIC16.36■□□□□ 0.21
FREM1Q5H8C1 UPK3BP1-201ENST00000428678 509 ntBASIC16.36■□□□□ 0.21
FREM1Q5H8C1 CATIP-AS1-202ENST00000441749 480 ntTSL 1 (best) BASIC16.36■□□□□ 0.21
FREM1Q5H8C1 IFI27L1-206ENST00000554562 571 ntTSL 3 BASIC16.36■□□□□ 0.21
FREM1Q5H8C1 AC087388.1-201ENST00000571370 1112 ntBASIC16.36■□□□□ 0.21
FREM1Q5H8C1 AL590326.2-201ENST00000625139 305 ntBASIC16.36■□□□□ 0.21
FREM1Q5H8C1 AL121956.5-201ENST00000625261 221 ntBASIC16.36■□□□□ 0.21
FREM1Q5H8C1 EBLN3P-205ENST00000629870 958 ntTSL 3 BASIC16.36■□□□□ 0.21
FREM1Q5H8C1 MEN1-201ENST00000312049 2761 ntAPPRIS ALT1 TSL 1 (best) BASIC16.35■□□□□ 0.21
FREM1Q5H8C1 GRB7-202ENST00000394204 1667 ntTSL 1 (best) BASIC16.35■□□□□ 0.21
FREM1Q5H8C1 DISP3-202ENST00000304391 1495 ntTSL 1 (best) BASIC16.35■□□□□ 0.21
FREM1Q5H8C1 ESPN-205ENST00000461727 1869 ntTSL 1 (best) BASIC16.35■□□□□ 0.21
FREM1Q5H8C1 TMEM235-202ENST00000421688 2490 ntAPPRIS P1 TSL 5 BASIC16.35■□□□□ 0.21
FREM1Q5H8C1 HCK-202ENST00000375852 2082 ntAPPRIS ALT2 TSL 1 (best) BASIC16.35■□□□□ 0.21
FREM1Q5H8C1 PXMP4-201ENST00000217398 979 ntTSL 2 BASIC16.35■□□□□ 0.21
FREM1Q5H8C1 CNP-204ENST00000472031 1019 ntTSL 2 BASIC16.35■□□□□ 0.21
FREM1Q5H8C1 FAM86EP-206ENST00000510506 987 ntBASIC16.35■□□□□ 0.21
FREM1Q5H8C1 CLDN7-204ENST00000571881 735 ntTSL 3 BASIC16.35■□□□□ 0.21
FREM1Q5H8C1 RMI2-205ENST00000576027 818 ntTSL 2 BASIC16.35■□□□□ 0.21
FREM1Q5H8C1 TMEM220-AS1-201ENST00000579114 575 ntTSL 4 BASIC16.35■□□□□ 0.21
FREM1Q5H8C1 MED9-202ENST00000580462 565 ntTSL 1 (best) BASIC16.35■□□□□ 0.21
FREM1Q5H8C1 UBA52-210ENST00000598780 668 ntAPPRIS P1 TSL 3 BASIC16.35■□□□□ 0.21
FREM1Q5H8C1 COLCA2-205ENST00000614153 1264 ntTSL 3 BASIC16.35■□□□□ 0.21
FREM1Q5H8C1 ZAR1L-202ENST00000533490 1564 ntAPPRIS P1 TSL 5 BASIC16.35■□□□□ 0.21
FREM1Q5H8C1 OSMR-202ENST00000502536 1740 ntTSL 1 (best) BASIC16.35■□□□□ 0.21
FREM1Q5H8C1 SYT17-207ENST00000568115 1721 ntTSL 5 BASIC16.35■□□□□ 0.21
FREM1Q5H8C1 IRGC-201ENST00000244314 1662 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
FREM1Q5H8C1 MEF2B-201ENST00000409224 1683 ntTSL 2 BASIC16.34■□□□□ 0.21
FREM1Q5H8C1 ETV4-201ENST00000319349 2429 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
FREM1Q5H8C1 TBL1X-201ENST00000217964 5871 ntTSL 1 (best) BASIC16.34■□□□□ 0.21
FREM1Q5H8C1 PSMD3-201ENST00000264639 2158 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
FREM1Q5H8C1 ASZ1-201ENST00000284629 1865 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
FREM1Q5H8C1 MIR564-202ENST00000385049 94 ntBASIC16.34■□□□□ 0.21
FREM1Q5H8C1 CRELD2-204ENST00000407217 1230 ntAPPRIS ALT2 TSL 1 (best) BASIC16.34■□□□□ 0.21
FREM1Q5H8C1 PDZD7-203ENST00000470414 1057 ntTSL 2 BASIC16.34■□□□□ 0.21
Retrieved 100 of 98,524 protein–RNA pairs in 26.8 ms