Protein–RNA interactions for Protein: Q52M75

LINC01554, Putative uncharacterized protein encoded by LINC01554, humanhuman

Predictions only

Length 96 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01554Q52M75 SLC16A3-202ENST00000392341 2086 ntAPPRIS P1 TSL 5 BASIC9.38□□□□□ -0.91
LINC01554Q52M75 TBC1D25-201ENST00000376771 4042 ntAPPRIS P1 TSL 1 (best) BASIC9.38□□□□□ -0.91
LINC01554Q52M75 PRR20B-201ENST00000377930 1847 ntAPPRIS P1 TSL 1 (best) BASIC9.38□□□□□ -0.91
LINC01554Q52M75 PRR20A-201ENST00000377931 1847 ntAPPRIS P1 TSL 1 (best) BASIC9.38□□□□□ -0.91
LINC01554Q52M75 GFRA3-202ENST00000378362 1837 ntAPPRIS ALT2 TSL 1 (best) BASIC9.38□□□□□ -0.91
LINC01554Q52M75 PRR20E-201ENST00000434815 1847 ntAPPRIS P1 TSL 1 (best) BASIC9.38□□□□□ -0.91
LINC01554Q52M75 PRR20D-201ENST00000452123 1847 ntAPPRIS P1 TSL 1 (best) BASIC9.38□□□□□ -0.91
LINC01554Q52M75 PRR20C-201ENST00000544357 1847 ntAPPRIS P1 TSL 1 (best) BASIC9.38□□□□□ -0.91
LINC01554Q52M75 PRR20C-202ENST00000614894 1847 ntAPPRIS P1 TSL 1 (best) BASIC9.38□□□□□ -0.91
LINC01554Q52M75 UNC5D-202ENST00000404895 3252 ntAPPRIS P3 TSL 1 (best) BASIC9.38□□□□□ -0.91
LINC01554Q52M75 PODN-201ENST00000312553 3010 ntAPPRIS P3 TSL 1 (best) BASIC9.38□□□□□ -0.91
LINC01554Q52M75 HOXA3-201ENST00000317201 2761 ntAPPRIS P1 TSL 5 BASIC9.38□□□□□ -0.91
LINC01554Q52M75 COPS7A-204ENST00000534947 2034 ntAPPRIS P1 TSL 1 (best) BASIC9.38□□□□□ -0.91
LINC01554Q52M75 MYO3A-201ENST00000265944 5581 ntAPPRIS P1 TSL 1 (best) BASIC9.38□□□□□ -0.91
LINC01554Q52M75 AVPR2-202ENST00000358927 1763 ntAPPRIS P1 TSL 5 BASIC9.38□□□□□ -0.91
LINC01554Q52M75 NARF-205ENST00000412079 1760 ntTSL 5 BASIC9.38□□□□□ -0.91
LINC01554Q52M75 MEN1-208ENST00000394374 3155 ntAPPRIS P3 TSL 5 BASIC9.38□□□□□ -0.91
LINC01554Q52M75 STEAP2-201ENST00000287908 6873 ntAPPRIS P1 TSL 1 (best) BASIC9.38□□□□□ -0.91
LINC01554Q52M75 C4orf36-201ENST00000295898 881 ntAPPRIS P1 TSL 1 (best) BASIC9.38□□□□□ -0.91
LINC01554Q52M75 SRM-201ENST00000376957 1266 ntAPPRIS P1 TSL 1 (best) BASIC9.38□□□□□ -0.91
LINC01554Q52M75 IGFBP3-202ENST00000381083 1050 ntAPPRIS ALT1 TSL 5 BASIC9.38□□□□□ -0.91
LINC01554Q52M75 CENPX-202ENST00000392359 805 ntAPPRIS P1 TSL 2 BASIC9.38□□□□□ -0.91
LINC01554Q52M75 HDHD5-203ENST00000399852 1118 ntTSL 3 BASIC9.38□□□□□ -0.91
LINC01554Q52M75 UBE3A-204ENST00000438097 8939 ntAPPRIS P3 TSL 5 BASIC9.38□□□□□ -0.91
LINC01554Q52M75 AC007009.1-201ENST00000458624 429 ntTSL 2 BASIC9.38□□□□□ -0.91
LINC01554Q52M75 TUSC3-209ENST00000509380 1266 ntTSL 5 BASIC9.38□□□□□ -0.91
LINC01554Q52M75 SENCR-201ENST00000526269 1298 ntTSL 1 (best) BASIC9.38□□□□□ -0.91
LINC01554Q52M75 AL390816.2-201ENST00000554252 737 ntTSL 3 BASIC9.38□□□□□ -0.91
LINC01554Q52M75 TMC6-218ENST00000591436 1155 ntTSL 1 (best) BASIC9.38□□□□□ -0.91
LINC01554Q52M75 TRAPPC6A-205ENST00000592647 514 ntTSL 2 BASIC9.38□□□□□ -0.91
LINC01554Q52M75 FAM228B-208ENST00000613899 1238 ntAPPRIS ALT2 TSL 1 (best) BASIC9.38□□□□□ -0.91
LINC01554Q52M75 RASSF1-AS1-201ENST00000629828 790 ntBASIC9.38□□□□□ -0.91
LINC01554Q52M75 MYCBPAP-203ENST00000436259 3102 ntAPPRIS ALT2 TSL 5 BASIC9.38□□□□□ -0.91
LINC01554Q52M75 ABHD12B-201ENST00000337334 1708 ntAPPRIS ALT2 TSL 1 (best) BASIC9.38□□□□□ -0.91
LINC01554Q52M75 CELF6-201ENST00000287202 3345 ntAPPRIS P3 TSL 1 (best) BASIC9.38□□□□□ -0.91
LINC01554Q52M75 SERPINE2-201ENST00000258405 2195 ntAPPRIS P3 TSL 1 (best) BASIC9.38□□□□□ -0.91
LINC01554Q52M75 EEF1D-201ENST00000317198 1458 ntAPPRIS ALT2 TSL 5 BASIC9.38□□□□□ -0.91
LINC01554Q52M75 HTATIP2-201ENST00000419348 1477 ntTSL 2 BASIC9.38□□□□□ -0.91
LINC01554Q52M75 HSPA1A-202ENST00000608703 1909 ntTSL 2 BASIC9.38□□□□□ -0.91
LINC01554Q52M75 UPK3B-202ENST00000334348 2373 ntAPPRIS ALT2 TSL 2 BASIC9.38□□□□□ -0.91
LINC01554Q52M75 SMO-201ENST00000249373 3738 ntAPPRIS P1 TSL 1 (best) BASIC9.38□□□□□ -0.91
LINC01554Q52M75 OSMR-201ENST00000274276 5539 ntAPPRIS P1 TSL 1 (best) BASIC9.38□□□□□ -0.91
LINC01554Q52M75 HSD11B1L-218ENST00000581773 1687 ntAPPRIS P3 TSL 1 (best) BASIC9.38□□□□□ -0.91
LINC01554Q52M75 ICE1-201ENST00000296564 7927 ntAPPRIS P2 TSL 1 (best) BASIC9.38□□□□□ -0.91
LINC01554Q52M75 FMR1-205ENST00000370475 4308 ntAPPRIS P3 TSL 1 (best) BASIC9.38□□□□□ -0.91
LINC01554Q52M75 GLS2-217ENST00000623608 2518 ntTSL 1 (best) BASIC9.38□□□□□ -0.91
LINC01554Q52M75 POU5F1B-201ENST00000465342 5360 ntAPPRIS P1 TSL 3 BASIC9.38□□□□□ -0.91
LINC01554Q52M75 CAPG-201ENST00000263867 1442 ntAPPRIS P1 TSL 1 (best) BASIC9.38□□□□□ -0.91
LINC01554Q52M75 KCTD15-201ENST00000284006 4918 ntTSL 1 (best) BASIC9.38□□□□□ -0.91
LINC01554Q52M75 SLC38A10-201ENST00000288439 2708 ntAPPRIS P3 TSL 1 (best) BASIC9.38□□□□□ -0.91
LINC01554Q52M75 ANKRD18A-201ENST00000399703 4041 ntAPPRIS P1 TSL 1 (best) BASIC9.38□□□□□ -0.91
LINC01554Q52M75 ATP2A3-205ENST00000397041 4675 ntAPPRIS P4 TSL 1 (best) BASIC9.38□□□□□ -0.91
LINC01554Q52M75 DDX1-207ENST00000617198 2257 ntTSL 1 (best) BASIC9.38□□□□□ -0.91
LINC01554Q52M75 PKIB-206ENST00000392490 1811 ntAPPRIS P1 TSL 1 (best) BASIC9.38□□□□□ -0.91
LINC01554Q52M75 GRINA-202ENST00000395068 1814 ntAPPRIS P1 TSL 1 (best) BASIC9.38□□□□□ -0.91
LINC01554Q52M75 CCNE1-201ENST00000262643 2043 ntAPPRIS P1 TSL 1 (best) BASIC9.38□□□□□ -0.91
LINC01554Q52M75 ITGB7-201ENST00000267082 2867 ntAPPRIS P1 TSL 1 (best) BASIC9.38□□□□□ -0.91
LINC01554Q52M75 VOPP1-207ENST00000428648 2866 ntTSL 2 BASIC9.38□□□□□ -0.91
LINC01554Q52M75 SYT17-201ENST00000355377 3081 ntAPPRIS P3 TSL 1 (best) BASIC9.37□□□□□ -0.91
LINC01554Q52M75 LETM2-205ENST00000519476 2240 ntTSL 1 (best) BASIC9.37□□□□□ -0.91
LINC01554Q52M75 GSG1L-202ENST00000395724 1399 ntAPPRIS ALT2 TSL 1 (best) BASIC9.37□□□□□ -0.91
LINC01554Q52M75 SNAP91-213ENST00000521485 4521 ntAPPRIS ALT2 TSL 5 BASIC9.37□□□□□ -0.91
LINC01554Q52M75 ZNF133-206ENST00000402618 2622 ntTSL 2 BASIC9.37□□□□□ -0.91
LINC01554Q52M75 EDIL3-201ENST00000296591 4727 ntAPPRIS P1 TSL 1 (best) BASIC9.37□□□□□ -0.91
LINC01554Q52M75 SIGLEC7-202ENST00000317643 1754 ntAPPRIS P1 TSL 1 (best) BASIC9.37□□□□□ -0.91
LINC01554Q52M75 PGAM5-204ENST00000543955 1773 ntTSL 2 BASIC9.37□□□□□ -0.91
LINC01554Q52M75 BANP-202ENST00000355022 2164 ntTSL 1 (best) BASIC9.37□□□□□ -0.91
LINC01554Q52M75 CDKN2B-AS1-208ENST00000580576 2175 ntTSL 1 (best) BASIC9.37□□□□□ -0.91
LINC01554Q52M75 CSNK1A1-202ENST00000377843 2559 ntAPPRIS ALT1 TSL 1 (best) BASIC9.37□□□□□ -0.91
LINC01554Q52M75 NF2-208ENST00000403435 2568 ntTSL 5 BASIC9.37□□□□□ -0.91
LINC01554Q52M75 IFT140-201ENST00000361339 2987 ntTSL 1 (best) BASIC9.37□□□□□ -0.91
LINC01554Q52M75 ZNF764-202ENST00000395091 2970 ntAPPRIS ALT1 TSL 2 BASIC9.37□□□□□ -0.91
LINC01554Q52M75 INPP5K-204ENST00000421807 2988 ntAPPRIS P1 TSL 1 (best) BASIC9.37□□□□□ -0.91
LINC01554Q52M75 ROCK1-201ENST00000399799 9484 ntAPPRIS P1 TSL 1 (best) BASIC9.37□□□□□ -0.91
LINC01554Q52M75 VKORC1L1-202ENST00000434382 1541 ntTSL 2 BASIC9.37□□□□□ -0.91
LINC01554Q52M75 SLC34A1-204ENST00000512593 1912 ntTSL 2 BASIC9.37□□□□□ -0.91
LINC01554Q52M75 CERS1-202ENST00000542296 1947 ntTSL 1 (best) BASIC9.37□□□□□ -0.91
LINC01554Q52M75 SP3-208ENST00000640958 2142 ntAPPRIS ALT2 TSL 1 (best) BASIC9.37□□□□□ -0.91
LINC01554Q52M75 KLC1-202ENST00000334553 2524 ntTSL 5 BASIC9.37□□□□□ -0.91
LINC01554Q52M75 STAMBPL1-203ENST00000371926 2532 ntAPPRIS P1 TSL 1 (best) BASIC9.37□□□□□ -0.91
LINC01554Q52M75 STX17-205ENST00000525640 2523 ntAPPRIS P1 TSL 2 BASIC9.37□□□□□ -0.91
LINC01554Q52M75 AC005064.1-201ENST00000422488 2725 ntTSL 1 (best) BASIC9.37□□□□□ -0.91
LINC01554Q52M75 AP1AR-201ENST00000274000 2902 ntAPPRIS P3 TSL 1 (best) BASIC9.37□□□□□ -0.91
LINC01554Q52M75 TTC28-AS1-207ENST00000428584 5859 ntTSL 1 (best) BASIC9.37□□□□□ -0.91
LINC01554Q52M75 LINC00884-202ENST00000448892 2680 ntTSL 5 BASIC9.37□□□□□ -0.91
LINC01554Q52M75 SGO1-209ENST00000442720 2266 ntAPPRIS ALT2 TSL 1 (best) BASIC9.37□□□□□ -0.91
LINC01554Q52M75 KDM5B-202ENST00000367264 6449 ntTSL 1 (best) BASIC9.37□□□□□ -0.91
LINC01554Q52M75 PKMYT1-204ENST00000440027 2061 ntTSL 2 BASIC9.37□□□□□ -0.91
LINC01554Q52M75 ZGPAT-204ENST00000369967 1890 ntAPPRIS P1 TSL 5 BASIC9.37□□□□□ -0.91
LINC01554Q52M75 MRPL23-AS1-201ENST00000419080 1876 ntTSL 3 BASIC9.37□□□□□ -0.91
LINC01554Q52M75 SPRTN-201ENST00000008440 1667 ntTSL 2 BASIC9.37□□□□□ -0.91
LINC01554Q52M75 GPRC5A-201ENST00000014914 7362 ntAPPRIS P1 TSL 1 (best) BASIC9.37□□□□□ -0.91
LINC01554Q52M75 PYCARD-202ENST00000350605 696 ntTSL 1 (best) BASIC9.37□□□□□ -0.91
LINC01554Q52M75 CCDC115-202ENST00000409127 1247 ntTSL 2 BASIC9.37□□□□□ -0.91
LINC01554Q52M75 SMARCA5-AS1-201ENST00000500800 945 ntTSL 1 (best) BASIC9.37□□□□□ -0.91
LINC01554Q52M75 ZNF302-211ENST00000509528 577 ntTSL 4 BASIC9.37□□□□□ -0.91
LINC01554Q52M75 AL117209.1-201ENST00000560931 828 ntTSL 3 BASIC9.37□□□□□ -0.91
LINC01554Q52M75 AC126544.1-201ENST00000580842 1059 ntBASIC9.37□□□□□ -0.91
LINC01554Q52M75 ZNF264-206ENST00000600531 774 ntTSL 2 BASIC9.37□□□□□ -0.91
LINC01554Q52M75 NR4A3-201ENST00000330847 4982 ntAPPRIS P4 TSL 5 BASIC9.37□□□□□ -0.91
Retrieved 100 of 98,524 protein–RNA pairs in 38.6 ms