Protein–RNA interactions for Protein: P78413

IRX4, Iroquois-class homeodomain protein IRX-4, humanhuman

Predictions only

Length 519 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
IRX4P78413 PPM1D-204ENST00000629650 1525 ntTSL 5 BASIC19.38■□□□□ 0.69
IRX4P78413 ISLR2-201ENST00000361742 4817 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
IRX4P78413 RAPGEF5-203ENST00000405243 2800 ntTSL 1 (best) BASIC19.38■□□□□ 0.69
IRX4P78413 EIF2AK3-201ENST00000303236 4646 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
IRX4P78413 SIGLEC14-201ENST00000360844 2035 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
IRX4P78413 MMP28-204ENST00000615136 2033 ntAPPRIS ALT2 TSL 1 (best) BASIC19.37■□□□□ 0.69
IRX4P78413 PFDN6-206ENST00000463584 1915 ntTSL 3 BASIC19.37■□□□□ 0.69
IRX4P78413 PCID2-202ENST00000337344 1898 ntAPPRIS P1 TSL 2 BASIC19.37■□□□□ 0.69
IRX4P78413 GPRC5B-201ENST00000300571 5213 ntAPPRIS P2 TSL 1 (best) BASIC19.37■□□□□ 0.69
IRX4P78413 NOTCH3-201ENST00000263388 8666 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
IRX4P78413 MINOS1-NBL1-204ENST00000602662 1623 ntAPPRIS P1 TSL 2 BASIC19.37■□□□□ 0.69
IRX4P78413 PKN1-201ENST00000242783 3069 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
IRX4P78413 ENTPD6-202ENST00000360031 2766 ntAPPRIS ALT2 TSL 1 (best) BASIC19.37■□□□□ 0.69
IRX4P78413 ELOC-209ENST00000602840 2780 ntTSL 5 BASIC19.37■□□□□ 0.69
IRX4P78413 DKK3-202ENST00000396505 2650 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
IRX4P78413 MLX-201ENST00000246912 2586 ntAPPRIS P3 TSL 1 (best) BASIC19.37■□□□□ 0.69
IRX4P78413 KLK14-201ENST00000156499 1060 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
IRX4P78413 COPS8-203ENST00000409334 794 ntTSL 5 BASIC19.37■□□□□ 0.69
IRX4P78413 AC003982.1-201ENST00000477404 484 ntTSL 2 BASIC19.37■□□□□ 0.69
IRX4P78413 LY6E-210ENST00000521182 1079 ntTSL 1 (best) BASIC19.37■□□□□ 0.69
IRX4P78413 RAP1B-228ENST00000542145 1060 ntTSL 2 BASIC19.37■□□□□ 0.69
IRX4P78413 AC005906.2-206ENST00000638180 1029 ntTSL 5 BASIC19.37■□□□□ 0.69
IRX4P78413 AC116562.4-202ENST00000641738 218 ntBASIC19.37■□□□□ 0.69
IRX4P78413 KRT15-203ENST00000393976 2394 ntAPPRIS P1 TSL 5 BASIC19.37■□□□□ 0.69
IRX4P78413 PPP1R12C-202ENST00000435544 2363 ntTSL 2 BASIC19.37■□□□□ 0.69
IRX4P78413 TPST2-201ENST00000338754 5697 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
IRX4P78413 LDLRAD4-211ENST00000587757 2171 ntTSL 2 BASIC19.37■□□□□ 0.69
IRX4P78413 CHTOP-204ENST00000368694 2096 ntAPPRIS P3 TSL 1 (best) BASIC19.37■□□□□ 0.69
IRX4P78413 RNF157-201ENST00000269391 4955 ntAPPRIS P3 TSL 1 (best) BASIC19.37■□□□□ 0.69
IRX4P78413 AC013268.5-201ENST00000454928 1959 ntTSL 2 BASIC19.37■□□□□ 0.69
IRX4P78413 DBN1-210ENST00000512501 1878 ntTSL 3 BASIC19.37■□□□□ 0.69
IRX4P78413 TTLL3-209ENST00000426895 2767 ntAPPRIS P2 TSL 2 BASIC19.37■□□□□ 0.69
IRX4P78413 TESMIN-201ENST00000255087 2579 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
IRX4P78413 ANKRD53-202ENST00000360589 1666 ntAPPRIS ALT2 TSL 2 BASIC19.36■□□□□ 0.69
IRX4P78413 RAB34-203ENST00000395243 1597 ntTSL 1 (best) BASIC19.36■□□□□ 0.69
IRX4P78413 UBE2Q2-204ENST00000561851 1582 ntTSL 2 BASIC19.36■□□□□ 0.69
IRX4P78413 AC018553.1-201ENST00000616682 1458 ntBASIC19.36■□□□□ 0.69
IRX4P78413 AL161938.1-201ENST00000569833 2180 ntBASIC19.36■□□□□ 0.69
IRX4P78413 ZNF286A-204ENST00000464847 5616 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
IRX4P78413 CGRRF1-201ENST00000216420 2057 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
IRX4P78413 GPBAR1-202ENST00000519574 1382 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
IRX4P78413 RBM24-202ENST00000379052 2703 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
IRX4P78413 HOXD12-202ENST00000406506 1318 ntAPPRIS P1 TSL 3 BASIC19.36■□□□□ 0.69
IRX4P78413 FBXW11-202ENST00000296933 4539 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
IRX4P78413 PIGQ-204ENST00000409527 1915 ntAPPRIS P1 TSL 2 BASIC19.36■□□□□ 0.69
IRX4P78413 KRT18P48-201ENST00000434763 852 ntBASIC19.36■□□□□ 0.69
IRX4P78413 AC092647.4-201ENST00000457211 535 ntBASIC19.36■□□□□ 0.69
IRX4P78413 KLHL21-204ENST00000467612 1056 ntTSL 3 BASIC19.36■□□□□ 0.69
IRX4P78413 GPX4-207ENST00000589115 812 ntTSL 2 BASIC19.36■□□□□ 0.69
IRX4P78413 DBP-204ENST00000599385 709 ntTSL 3 BASIC19.36■□□□□ 0.69
IRX4P78413 LCE1C-202ENST00000607093 644 ntAPPRIS P2 BASIC19.36■□□□□ 0.69
IRX4P78413 CACNA1A-225ENST00000636389 8137 ntAPPRIS ALT2 TSL 5 BASIC19.36■□□□□ 0.69
IRX4P78413 CWH43-201ENST00000226432 2472 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
IRX4P78413 SMC5-AS1-201ENST00000594708 1818 ntTSL 2 BASIC19.36■□□□□ 0.69
IRX4P78413 N4BP3-201ENST00000274605 6080 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
IRX4P78413 ARL5A-201ENST00000295087 5326 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
IRX4P78413 SOWAHC-201ENST00000356454 4657 ntAPPRIS P1 BASIC19.36■□□□□ 0.69
IRX4P78413 TBC1D19-201ENST00000264866 2263 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
IRX4P78413 CPZ-202ENST00000360986 2267 ntAPPRIS ALT2 TSL 1 (best) BASIC19.36■□□□□ 0.69
IRX4P78413 LRP3-201ENST00000253193 3807 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
IRX4P78413 ADNP2-201ENST00000262198 5393 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
IRX4P78413 PVRIG-201ENST00000317271 1583 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
IRX4P78413 NDUFA10-203ENST00000404554 1557 ntTSL 5 BASIC19.36■□□□□ 0.69
IRX4P78413 NUDT15-201ENST00000258662 2098 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
IRX4P78413 MTFR1L-202ENST00000374301 2099 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
IRX4P78413 PNCK-201ENST00000340888 1508 ntAPPRIS P1 TSL 5 BASIC19.35■□□□□ 0.69
IRX4P78413 ALKBH6-213ENST00000486389 1525 ntTSL 3 BASIC19.35■□□□□ 0.69
IRX4P78413 POLR1D-203ENST00000399697 2036 ntTSL 1 (best) BASIC19.35■□□□□ 0.69
IRX4P78413 JAG1-201ENST00000254958 6048 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
IRX4P78413 CCT5-214ENST00000515676 1997 ntTSL 2 BASIC19.35■□□□□ 0.69
IRX4P78413 HEMK1-206ENST00000455834 1499 ntAPPRIS P1 TSL 5 BASIC19.35■□□□□ 0.69
IRX4P78413 OGFOD2-222ENST00000545317 1481 ntTSL 2 BASIC19.35■□□□□ 0.69
IRX4P78413 NCAN-201ENST00000252575 6387 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
IRX4P78413 SLC25A3-201ENST00000188376 1909 ntAPPRIS ALT1 TSL 1 (best) BASIC19.35■□□□□ 0.69
IRX4P78413 CORO1B-201ENST00000341356 1881 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
IRX4P78413 PSMG4-209ENST00000473000 4603 ntTSL 2 BASIC19.35■□□□□ 0.69
IRX4P78413 PDE8A-202ENST00000339708 2663 ntAPPRIS ALT2 TSL 1 (best) BASIC19.35■□□□□ 0.69
IRX4P78413 CHPF-203ENST00000535926 2634 ntTSL 2 BASIC19.35■□□□□ 0.69
IRX4P78413 MTDH-203ENST00000519934 2184 ntTSL 5 BASIC19.35■□□□□ 0.69
IRX4P78413 PLPPR2-208ENST00000591608 2552 ntAPPRIS ALT2 TSL 2 BASIC19.35■□□□□ 0.69
IRX4P78413 ISCA1-202ENST00000326094 1264 ntTSL 3 BASIC19.35■□□□□ 0.69
IRX4P78413 MARC2-202ENST00000366913 2134 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
IRX4P78413 ABCD1-202ENST00000370129 1016 ntTSL 2 BASIC19.35■□□□□ 0.69
IRX4P78413 ELOB-202ENST00000409477 997 ntTSL 1 (best) BASIC19.35■□□□□ 0.69
IRX4P78413 CD70-202ENST00000423145 881 ntTSL 2 BASIC19.35■□□□□ 0.69
IRX4P78413 FAM41C-202ENST00000432963 504 ntTSL 2 BASIC19.35■□□□□ 0.69
IRX4P78413 TUBB8P6-201ENST00000436895 1288 ntBASIC19.35■□□□□ 0.69
IRX4P78413 CHCHD3-203ENST00000448878 1038 ntTSL 5 BASIC19.35■□□□□ 0.69
IRX4P78413 AC008040.2-201ENST00000461049 708 ntBASIC19.35■□□□□ 0.69
IRX4P78413 COX11P1-201ENST00000489116 835 ntBASIC19.35■□□□□ 0.69
IRX4P78413 SNCB-205ENST00000510387 730 ntAPPRIS P1 TSL 2 BASIC19.35■□□□□ 0.69
IRX4P78413 AC064807.1-201ENST00000518942 816 ntTSL 3 BASIC19.35■□□□□ 0.69
IRX4P78413 DUX4-205ENST00000570263 768 ntAPPRIS ALT2 TSL 1 (best) BASIC19.35■□□□□ 0.69
IRX4P78413 ELAC2-212ENST00000578071 579 ntTSL 4 BASIC19.35■□□□□ 0.69
IRX4P78413 MEN1-205ENST00000377316 2868 ntTSL 5 BASIC19.35■□□□□ 0.69
IRX4P78413 ECHDC1-214ENST00000474289 2443 ntAPPRIS P3 TSL 5 BASIC19.35■□□□□ 0.69
IRX4P78413 SLC25A15-201ENST00000338625 1586 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
IRX4P78413 ACBD4-207ENST00000586346 1579 ntTSL 1 (best) BASIC19.35■□□□□ 0.69
IRX4P78413 MALT1-202ENST00000348428 9368 ntAPPRIS P4 TSL 1 (best) BASIC19.35■□□□□ 0.69
IRX4P78413 TRABD-201ENST00000303434 2329 ntAPPRIS P3 TSL 1 (best) BASIC19.35■□□□□ 0.69
Retrieved 100 of 98,524 protein–RNA pairs in 32.3 ms