Protein–RNA interactions for Protein: P78334

GABRE, Gamma-aminobutyric acid receptor subunit epsilon, humanhuman

Predictions only

Length 506 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GABREP78334 DNAJC8-201ENST00000263697 1759 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
GABREP78334 CAMKV-205ENST00000467248 1688 ntTSL 2 BASIC17.72■□□□□ 0.43
GABREP78334 LUC7L-201ENST00000293872 1456 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
GABREP78334 C6orf15-201ENST00000259870 1140 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
GABREP78334 RAB24-204ENST00000393611 1236 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
GABREP78334 AC080013.1-203ENST00000468242 720 ntTSL 5 BASIC17.72■□□□□ 0.43
GABREP78334 NECTIN3-AS1-204ENST00000476301 568 ntTSL 4 BASIC17.72■□□□□ 0.43
GABREP78334 BOC-211ENST00000484034 1286 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
GABREP78334 AC080013.1-201ENST00000495318 566 ntTSL 4 BASIC17.72■□□□□ 0.43
GABREP78334 AC079848.1-202ENST00000507924 444 ntTSL 3 BASIC17.72■□□□□ 0.43
GABREP78334 AC104390.1-201ENST00000555663 520 ntBASIC17.72■□□□□ 0.43
GABREP78334 MRPL52-215ENST00000556840 398 ntTSL 2 BASIC17.72■□□□□ 0.43
GABREP78334 AC026471.3-201ENST00000565137 578 ntTSL 2 BASIC17.72■□□□□ 0.43
GABREP78334 SUSD1-204ENST00000374270 3124 ntAPPRIS P3 TSL 1 (best) BASIC17.72■□□□□ 0.43
GABREP78334 MARK1-205ENST00000611084 5321 ntAPPRIS ALT1 TSL 1 (best) BASIC17.72■□□□□ 0.43
GABREP78334 MSLN-205ENST00000563941 2109 ntAPPRIS ALT2 TSL 1 (best) BASIC17.72■□□□□ 0.43
GABREP78334 PCSK6-214ENST00000611716 4409 ntAPPRIS P4 TSL 1 (best) BASIC17.72■□□□□ 0.43
GABREP78334 TCP11-209ENST00000444780 1841 ntAPPRIS ALT2 TSL 2 BASIC17.72■□□□□ 0.43
GABREP78334 EVC-201ENST00000264956 6431 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
GABREP78334 WRB-201ENST00000333781 1616 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
GABREP78334 FAM43B-201ENST00000332947 2572 ntAPPRIS P1 BASIC17.72■□□□□ 0.43
GABREP78334 LINC00634-201ENST00000381348 1510 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
GABREP78334 ERCC2-205ENST00000485403 1538 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
GABREP78334 SH2B3-201ENST00000341259 5406 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
GABREP78334 DLEU7-201ENST00000400393 2092 ntAPPRIS P3 TSL 1 (best) BASIC17.71■□□□□ 0.43
GABREP78334 TMEFF1-201ENST00000374879 2611 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
GABREP78334 DEDD2-204ENST00000595337 1894 ntAPPRIS P3 TSL 3 BASIC17.71■□□□□ 0.43
GABREP78334 FSCN2-201ENST00000334850 1551 ntTSL 5 BASIC17.71■□□□□ 0.43
GABREP78334 KLHL11-201ENST00000319121 2383 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
GABREP78334 ZNF771-201ENST00000319296 2371 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
GABREP78334 SRSF4-201ENST00000373795 2387 ntAPPRIS P2 TSL 1 (best) BASIC17.71■□□□□ 0.43
GABREP78334 CELA2A-201ENST00000359621 919 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
GABREP78334 LBX1-AS1-204ENST00000456391 421 ntTSL 5 BASIC17.71■□□□□ 0.43
GABREP78334 ZNF688-207ENST00000567855 540 ntTSL 2 BASIC17.71■□□□□ 0.43
GABREP78334 LIMD2-211ENST00000583211 1298 ntTSL 3 BASIC17.71■□□□□ 0.43
GABREP78334 C19orf25-204ENST00000586564 1265 ntAPPRIS P1 TSL 3 BASIC17.71■□□□□ 0.43
GABREP78334 AC104532.1-201ENST00000588891 580 ntAPPRIS P1 TSL 4 BASIC17.71■□□□□ 0.43
GABREP78334 MRPL4-203ENST00000393733 1620 ntTSL 5 BASIC17.71■□□□□ 0.43
GABREP78334 SCD5-201ENST00000273908 1995 ntTSL 2 BASIC17.71■□□□□ 0.43
GABREP78334 TH-202ENST00000333684 1535 ntTSL 1 (best) BASIC17.71■□□□□ 0.43
GABREP78334 RCC2P3-201ENST00000418112 1537 ntBASIC17.71■□□□□ 0.43
GABREP78334 C2CD2-202ENST00000380486 6345 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
GABREP78334 WDR45-205ENST00000376358 1432 ntTSL 2 BASIC17.71■□□□□ 0.43
GABREP78334 CDK13-202ENST00000340829 5066 ntAPPRIS ALT1 TSL 1 (best) BASIC17.71■□□□□ 0.43
GABREP78334 SETD3-201ENST00000329331 1330 ntTSL 1 (best) BASIC17.71■□□□□ 0.42
GABREP78334 STARD3-209ENST00000544210 1666 ntTSL 2 BASIC17.71■□□□□ 0.42
GABREP78334 PDLIM5-205ENST00000380180 2020 ntTSL 1 (best) BASIC17.71■□□□□ 0.42
GABREP78334 GRM5-202ENST00000305447 4571 ntAPPRIS ALT2 TSL 1 (best) BASIC17.71■□□□□ 0.42
GABREP78334 TCF3P1-201ENST00000423021 1937 ntBASIC17.7■□□□□ 0.42
GABREP78334 DOCK9-206ENST00000427887 4176 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
GABREP78334 RREB1-203ENST00000379933 5826 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
GABREP78334 SOX21-201ENST00000376945 2778 ntAPPRIS P1 BASIC17.7■□□□□ 0.42
GABREP78334 PLBD1-201ENST00000240617 2426 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
GABREP78334 BPTF-201ENST00000306378 9688 ntAPPRIS P2 TSL 1 (best) BASIC17.7■□□□□ 0.42
GABREP78334 TSR1-201ENST00000301364 5188 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
GABREP78334 RBFADN-201ENST00000562391 1350 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
GABREP78334 GOSR2-210ENST00000576910 1891 ntAPPRIS ALT1 TSL 5 BASIC17.7■□□□□ 0.42
GABREP78334 ASB16-201ENST00000293414 2139 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
GABREP78334 EXOSC4-201ENST00000316052 887 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
GABREP78334 CD1E-209ENST00000368164 869 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
GABREP78334 HYI-201ENST00000372425 1265 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
GABREP78334 AL049795.1-201ENST00000373604 642 ntTSL 3 BASIC17.7■□□□□ 0.42
GABREP78334 AL356056.2-201ENST00000506914 669 ntTSL 4 BASIC17.7■□□□□ 0.42
GABREP78334 AC099811.2-203ENST00000592574 958 ntAPPRIS P1 TSL 5 BASIC17.7■□□□□ 0.42
GABREP78334 MARK4-211ENST00000622871 1147 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
GABREP78334 TMEM104-202ENST00000417024 1781 ntTSL 2 BASIC17.7■□□□□ 0.42
GABREP78334 WNT10A-201ENST00000258411 2547 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
GABREP78334 JMJD7-201ENST00000397299 1416 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
GABREP78334 RBM42-201ENST00000262633 1680 ntAPPRIS P2 TSL 1 (best) BASIC17.7■□□□□ 0.42
GABREP78334 KRT13-202ENST00000336861 1673 ntAPPRIS ALT2 TSL 1 (best) BASIC17.7■□□□□ 0.42
GABREP78334 AL109659.2-201ENST00000606809 1674 ntBASIC17.7■□□□□ 0.42
GABREP78334 NKD2-201ENST00000274150 1940 ntAPPRIS ALT2 TSL 1 (best) BASIC17.7■□□□□ 0.42
GABREP78334 MAG-203ENST00000537831 2341 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
GABREP78334 C18orf25-204ENST00000615553 2329 ntTSL 5 BASIC17.7■□□□□ 0.42
GABREP78334 GMPPA-203ENST00000358215 1823 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
GABREP78334 GPT-205ENST00000528431 1822 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
GABREP78334 TMEM237-213ENST00000621467 1824 ntAPPRIS ALT2 TSL 1 (best) BASIC17.7■□□□□ 0.42
GABREP78334 AC005906.2-207ENST00000639005 1580 ntTSL 5 BASIC17.7■□□□□ 0.42
GABREP78334 HLA-A-201ENST00000376802 1334 ntBASIC17.7■□□□□ 0.42
GABREP78334 MYH14-206ENST00000596571 5988 ntAPPRIS ALT2 TSL 5 BASIC17.69■□□□□ 0.42
GABREP78334 SHOX2-203ENST00000441443 3038 ntAPPRIS ALT2 TSL 5 BASIC17.69■□□□□ 0.42
GABREP78334 NARS2-201ENST00000281038 2519 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
GABREP78334 LPAR2-202ENST00000542587 2546 ntAPPRIS P1 TSL 2 BASIC17.69■□□□□ 0.42
GABREP78334 IL34-201ENST00000288098 1607 ntAPPRIS P2 TSL 1 (best) BASIC17.69■□□□□ 0.42
GABREP78334 ZNF282-204ENST00000610704 3722 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
GABREP78334 KLHL21-206ENST00000610898 1945 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
GABREP78334 MTMR14-201ENST00000296003 2494 ntAPPRIS P4 TSL 1 (best) BASIC17.69■□□□□ 0.42
GABREP78334 ISYNA1-206ENST00000578963 1691 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
GABREP78334 ENSA-205ENST00000361532 792 ntTSL 2 BASIC17.69■□□□□ 0.42
GABREP78334 IGF2-202ENST00000381392 1005 ntAPPRIS ALT1 TSL 1 (best) BASIC17.69■□□□□ 0.42
GABREP78334 AL590627.1-203ENST00000421194 1026 ntBASIC17.69■□□□□ 0.42
GABREP78334 SPAG16-207ENST00000432529 1250 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
GABREP78334 ISCU-208ENST00000539593 1071 ntTSL 2 BASIC17.69■□□□□ 0.42
GABREP78334 AC007220.1-201ENST00000572466 1055 ntTSL 3 BASIC17.69■□□□□ 0.42
GABREP78334 GPR32P1-201ENST00000601788 811 ntBASIC17.69■□□□□ 0.42
GABREP78334 PNMA8A-203ENST00000602246 572 ntAPPRIS ALT2 TSL 4 BASIC17.69■□□□□ 0.42
GABREP78334 BX640515.1-201ENST00000617215 977 ntBASIC17.69■□□□□ 0.42
GABREP78334 AGFG2-201ENST00000300176 4796 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
GABREP78334 BTNL9-210ENST00000515271 1444 ntTSL 2 BASIC17.69■□□□□ 0.42
GABREP78334 MFSD1-201ENST00000264266 1594 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
Retrieved 100 of 98,524 protein–RNA pairs in 32.5 ms