Protein–RNA interactions for Protein: P68431

HIST1H3A, Histone H3.1, humanhuman

Predictions only

Length 136 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HIST1H3AP68431 NUDT17-201ENST00000334513 1473 ntAPPRIS P1 TSL 5 BASIC16.3■□□□□ 0.2
HIST1H3AP68431 UVSSA-207ENST00000511216 2927 ntAPPRIS P2 TSL 1 (best) BASIC16.3■□□□□ 0.2
HIST1H3AP68431 ITGA4-202ENST00000339307 1403 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
HIST1H3AP68431 SNX17-201ENST00000233575 2044 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
HIST1H3AP68431 TRIM41-202ENST00000351937 2696 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
HIST1H3AP68431 AC027031.2-201ENST00000521369 1318 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
HIST1H3AP68431 AC120498.9-201ENST00000339021 3867 ntBASIC16.3■□□□□ 0.2
HIST1H3AP68431 RHOC-203ENST00000369632 1026 ntAPPRIS P1 TSL 3 BASIC16.3■□□□□ 0.2
HIST1H3AP68431 DNPH1-202ENST00000393987 796 ntTSL 2 BASIC16.3■□□□□ 0.2
HIST1H3AP68431 REPIN1-210ENST00000482680 1029 ntTSL 2 BASIC16.3■□□□□ 0.2
HIST1H3AP68431 TMEM185A-204ENST00000507237 903 ntTSL 2 BASIC16.3■□□□□ 0.2
HIST1H3AP68431 AC134349.1-201ENST00000543969 385 ntTSL 3 BASIC16.3■□□□□ 0.2
HIST1H3AP68431 AL355075.4-201ENST00000554988 638 ntBASIC16.3■□□□□ 0.2
HIST1H3AP68431 AL353719.1-201ENST00000566847 864 ntBASIC16.3■□□□□ 0.2
HIST1H3AP68431 MIR4497-201ENST00000583208 89 ntBASIC16.3■□□□□ 0.2
HIST1H3AP68431 AC215522.2-202ENST00000633163 1143 ntTSL 5 BASIC16.3■□□□□ 0.2
HIST1H3AP68431 CLMP-201ENST00000448775 5072 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
HIST1H3AP68431 ATRIP-202ENST00000346691 2509 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
HIST1H3AP68431 FGFR1-203ENST00000341462 6054 ntTSL 5 BASIC16.3■□□□□ 0.2
HIST1H3AP68431 UNC5B-201ENST00000335350 6841 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
HIST1H3AP68431 ANXA3-201ENST00000264908 1657 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
HIST1H3AP68431 AC135050.7-201ENST00000624508 2218 ntBASIC16.3■□□□□ 0.2
HIST1H3AP68431 BANP-202ENST00000355022 2164 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
HIST1H3AP68431 ACSS3-201ENST00000261206 2666 ntAPPRIS ALT1 TSL 1 (best) BASIC16.3■□□□□ 0.2
HIST1H3AP68431 KANSL1-202ENST00000432791 5343 ntAPPRIS P3 TSL 1 (best) BASIC16.3■□□□□ 0.2
HIST1H3AP68431 RNF139-201ENST00000303545 2637 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
HIST1H3AP68431 FAM117B-201ENST00000392238 5763 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
HIST1H3AP68431 NEFHP1-201ENST00000412845 2629 ntBASIC16.3■□□□□ 0.2
HIST1H3AP68431 PHKG2-202ENST00000424889 1566 ntTSL 2 BASIC16.3■□□□□ 0.2
HIST1H3AP68431 CSPG5-202ENST00000383738 4161 ntAPPRIS ALT2 TSL 1 (best) BASIC16.3■□□□□ 0.2
HIST1H3AP68431 EPB41L2-211ENST00000525271 2568 ntTSL 2 BASIC16.3■□□□□ 0.2
HIST1H3AP68431 HOXC11-201ENST00000243082 2039 ntTSL 3 BASIC16.29■□□□□ 0.2
HIST1H3AP68431 SMPD1-201ENST00000342245 2452 ntAPPRIS ALT1 TSL 1 (best) BASIC16.29■□□□□ 0.2
HIST1H3AP68431 ANKRD40-201ENST00000285243 4184 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
HIST1H3AP68431 NCF1-201ENST00000289473 1396 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
HIST1H3AP68431 KCNIP4-205ENST00000382152 1767 ntTSL 5 BASIC16.29■□□□□ 0.2
HIST1H3AP68431 DMRT3-201ENST00000190165 2183 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
HIST1H3AP68431 STRADB-202ENST00000392249 2190 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
HIST1H3AP68431 KIF16B-206ENST00000636835 5109 ntAPPRIS ALT2 TSL 1 (best) BASIC16.29■□□□□ 0.2
HIST1H3AP68431 HAUS1-201ENST00000282058 1125 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
HIST1H3AP68431 COX5A-201ENST00000322347 1268 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
HIST1H3AP68431 KRT17P2-202ENST00000326333 1174 ntTSL 2 BASIC16.29■□□□□ 0.2
HIST1H3AP68431 CALML5-201ENST00000380332 859 ntAPPRIS P1 BASIC16.29■□□□□ 0.2
HIST1H3AP68431 RNF144A-AS1-204ENST00000437589 618 ntTSL 2 BASIC16.29■□□□□ 0.2
HIST1H3AP68431 OOEP-AS1-201ENST00000445350 463 ntTSL 3 BASIC16.29■□□□□ 0.2
HIST1H3AP68431 AL139246.2-201ENST00000456687 1297 ntTSL 5 BASIC16.29■□□□□ 0.2
HIST1H3AP68431 AC136628.4-201ENST00000520758 535 ntTSL 2 BASIC16.29■□□□□ 0.2
HIST1H3AP68431 CFL2-205ENST00000555765 632 ntTSL 2 BASIC16.29■□□□□ 0.2
HIST1H3AP68431 MIR3180-5-201ENST00000583743 153 ntBASIC16.29■□□□□ 0.2
HIST1H3AP68431 UBALD1-209ENST00000591897 1275 ntTSL 2 BASIC16.29■□□□□ 0.2
HIST1H3AP68431 HCK-202ENST00000375852 2082 ntAPPRIS ALT2 TSL 1 (best) BASIC16.29■□□□□ 0.2
HIST1H3AP68431 STX6-204ENST00000542060 4809 ntTSL 2 BASIC16.29■□□□□ 0.2
HIST1H3AP68431 CHRNA4-201ENST00000370263 5577 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
HIST1H3AP68431 MIB2-231ENST00000518681 3116 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
HIST1H3AP68431 SEMA6C-210ENST00000621728 1918 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
HIST1H3AP68431 ATP1B1-202ENST00000367816 2608 ntAPPRIS P1 TSL 5 BASIC16.29■□□□□ 0.2
HIST1H3AP68431 MCU-202ENST00000373053 2949 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
HIST1H3AP68431 C6orf118-201ENST00000230301 1812 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
HIST1H3AP68431 MADD-208ENST00000405573 1823 ntTSL 5 BASIC16.29■□□□□ 0.2
HIST1H3AP68431 AC092338.2-201ENST00000568827 1415 ntBASIC16.28■□□□□ 0.2
HIST1H3AP68431 CHRAC1-201ENST00000220913 2488 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
HIST1H3AP68431 MAFF-206ENST00000538320 2458 ntAPPRIS P1 TSL 4 BASIC16.28■□□□□ 0.2
HIST1H3AP68431 PCDHA2-203ENST00000526136 5254 ntAPPRIS P2 TSL 1 (best) BASIC16.28■□□□□ 0.2
HIST1H3AP68431 CD55-206ENST00000391921 2433 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
HIST1H3AP68431 SERPINH1-212ENST00000530284 1358 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
HIST1H3AP68431 FAM49B-214ENST00000519540 2021 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
HIST1H3AP68431 FLT1-201ENST00000282397 7092 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
HIST1H3AP68431 KRT14-201ENST00000167586 1662 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
HIST1H3AP68431 METRN-204ENST00000568223 3325 ntAPPRIS P2 TSL 1 (best) BASIC16.28■□□□□ 0.2
HIST1H3AP68431 ARID1B-203ENST00000350026 7962 ntAPPRIS P3 TSL 1 (best) BASIC16.28■□□□□ 0.2
HIST1H3AP68431 VCY1B-201ENST00000250823 550 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
HIST1H3AP68431 VCY-201ENST00000250825 550 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
HIST1H3AP68431 AP000593.1-201ENST00000393668 712 ntBASIC16.28■□□□□ 0.2
HIST1H3AP68431 SHBG-203ENST00000416273 1042 ntAPPRIS ALT2 TSL 3 BASIC16.28■□□□□ 0.2
HIST1H3AP68431 MLF2-210ENST00000542154 838 ntAPPRIS P1 TSL 5 BASIC16.28■□□□□ 0.2
HIST1H3AP68431 SHBG-215ENST00000575903 1196 ntTSL 3 BASIC16.28■□□□□ 0.2
HIST1H3AP68431 AATK-203ENST00000417379 5081 ntAPPRIS ALT2 TSL 1 (best) BASIC16.28■□□□□ 0.2
HIST1H3AP68431 MYLKP1-201ENST00000509077 1580 ntBASIC16.28■□□□□ 0.2
HIST1H3AP68431 WWOX-214ENST00000566780 2482 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
HIST1H3AP68431 EFEMP2-210ENST00000528176 1504 ntTSL 5 BASIC16.28■□□□□ 0.2
HIST1H3AP68431 XYLT2-203ENST00000507602 2107 ntTSL 2 BASIC16.28■□□□□ 0.2
HIST1H3AP68431 PLA2G2F-201ENST00000375102 2723 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
HIST1H3AP68431 MAFF-207ENST00000538999 2365 ntTSL 2 BASIC16.28■□□□□ 0.2
HIST1H3AP68431 GNAS-AS1-202ENST00000443966 2341 ntTSL 5 BASIC16.28■□□□□ 0.2
HIST1H3AP68431 TCP11-201ENST00000244645 2018 ntAPPRIS P3 TSL 1 (best) BASIC16.28■□□□□ 0.2
HIST1H3AP68431 TOX2-205ENST00000423191 1709 ntTSL 2 BASIC16.28■□□□□ 0.2
HIST1H3AP68431 HOXA11-AS-205ENST00000522863 1723 ntTSL 5 BASIC16.28■□□□□ 0.2
HIST1H3AP68431 ORC5-201ENST00000297431 1958 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
HIST1H3AP68431 CTNNBL1-201ENST00000361383 1925 ntAPPRIS P2 TSL 1 (best) BASIC16.27■□□□□ 0.2
HIST1H3AP68431 ANKRD18DP-201ENST00000335478 2171 ntTSL 2 BASIC16.27■□□□□ 0.2
HIST1H3AP68431 PDE9A-209ENST00000398227 1606 ntTSL 1 (best) BASIC16.27■□□□□ 0.2
HIST1H3AP68431 AC034236.2-201ENST00000606662 1610 ntBASIC16.27■□□□□ 0.2
HIST1H3AP68431 CNTNAP3B-203ENST00000377561 5379 ntAPPRIS P2 TSL 1 (best) BASIC16.27■□□□□ 0.2
HIST1H3AP68431 GPT-202ENST00000394955 1885 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
HIST1H3AP68431 DKK3-202ENST00000396505 2650 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
HIST1H3AP68431 AZIN1-201ENST00000337198 4721 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
HIST1H3AP68431 AL162741.1-201ENST00000565563 1558 ntBASIC16.27■□□□□ 0.2
HIST1H3AP68431 PLCH2-205ENST00000449969 5450 ntTSL 5 BASIC16.27■□□□□ 0.2
HIST1H3AP68431 AP003774.1-201ENST00000316124 2340 ntTSL 2 BASIC16.27■□□□□ 0.2
HIST1H3AP68431 KLHL17-201ENST00000338591 2560 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
Retrieved 100 of 98,524 protein–RNA pairs in 25.5 ms