Protein–RNA interactions for Protein: P62068

USP46, Ubiquitin carboxyl-terminal hydrolase 46, humanhuman

Predictions only

Length 366 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
USP46P62068 NKX2-1-203ENST00000518149 2583 ntAPPRIS P1 TSL 5 BASIC19.6■□□□□ 0.73
USP46P62068 SMPD1-203ENST00000527275 2188 ntAPPRIS P3 TSL 2 BASIC19.6■□□□□ 0.73
USP46P62068 GATA2-202ENST00000430265 2525 ntTSL 1 (best) BASIC19.6■□□□□ 0.73
USP46P62068 AC005332.1-201ENST00000577698 1310 ntBASIC19.6■□□□□ 0.73
USP46P62068 LMO4-202ENST00000370544 5405 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
USP46P62068 FAM182B-201ENST00000376403 1681 ntAPPRIS P5 TSL 1 (best) BASIC19.6■□□□□ 0.73
USP46P62068 FGFR2-204ENST00000356226 3547 ntTSL 1 (best) BASIC19.6■□□□□ 0.73
USP46P62068 SHROOM1-202ENST00000378676 2352 ntAPPRIS ALT2 TSL 5 BASIC19.6■□□□□ 0.73
USP46P62068 GPX4-201ENST00000354171 919 ntAPPRIS P2 TSL 1 (best) BASIC19.6■□□□□ 0.73
USP46P62068 PCED1CP-201ENST00000419887 785 ntBASIC19.6■□□□□ 0.73
USP46P62068 DGUOK-AS1-203ENST00000453103 601 ntTSL 3 BASIC19.6■□□□□ 0.73
USP46P62068 C7orf49-209ENST00000483029 596 ntTSL 2 BASIC19.6■□□□□ 0.73
USP46P62068 ZNF575-205ENST00000601282 1086 ntAPPRIS P1 TSL 2 BASIC19.6■□□□□ 0.73
USP46P62068 SLF2-205ENST00000609386 891 ntAPPRIS ALT2 BASIC19.6■□□□□ 0.73
USP46P62068 SIGIRR-220ENST00000531205 1649 ntTSL 2 BASIC19.6■□□□□ 0.73
USP46P62068 GALNT13-201ENST00000392825 5536 ntAPPRIS P1 TSL 2 BASIC19.6■□□□□ 0.73
USP46P62068 COL4A3BP-201ENST00000261415 2262 ntTSL 1 (best) BASIC19.6■□□□□ 0.73
USP46P62068 SGO1-209ENST00000442720 2266 ntAPPRIS ALT2 TSL 1 (best) BASIC19.6■□□□□ 0.73
USP46P62068 DNAJC28-204ENST00000617313 2237 ntAPPRIS P1 TSL 5 BASIC19.6■□□□□ 0.73
USP46P62068 LINC01311-201ENST00000565162 1445 ntBASIC19.59■□□□□ 0.73
USP46P62068 AP3S1-201ENST00000316788 1730 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
USP46P62068 CLINT1-207ENST00000523908 2346 ntAPPRIS ALT1 TSL 1 (best) BASIC19.59■□□□□ 0.73
USP46P62068 MARK2-201ENST00000350490 2903 ntAPPRIS ALT2 TSL 1 (best) BASIC19.59■□□□□ 0.73
USP46P62068 BSCL2-201ENST00000278893 1364 ntAPPRIS ALT2 TSL 2 BASIC19.59■□□□□ 0.73
USP46P62068 EFS-201ENST00000216733 3118 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
USP46P62068 DMD-208ENST00000378680 1858 ntTSL 1 (best) BASIC19.59■□□□□ 0.73
USP46P62068 RPP25-201ENST00000322177 3049 ntAPPRIS P1 BASIC19.59■□□□□ 0.73
USP46P62068 ECHDC1-214ENST00000474289 2443 ntAPPRIS P3 TSL 5 BASIC19.59■□□□□ 0.73
USP46P62068 COPE-201ENST00000262812 1141 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
USP46P62068 GPR32-201ENST00000270590 1269 ntAPPRIS P1 BASIC19.59■□□□□ 0.73
USP46P62068 CLN3-202ENST00000355477 1173 ntTSL 1 (best) BASIC19.59■□□□□ 0.73
USP46P62068 COPS8-203ENST00000409334 794 ntTSL 5 BASIC19.59■□□□□ 0.73
USP46P62068 GRAMD4P1-201ENST00000435181 1110 ntBASIC19.59■□□□□ 0.73
USP46P62068 KRT18P23-201ENST00000435622 1283 ntBASIC19.59■□□□□ 0.73
USP46P62068 C16orf91-201ENST00000442039 978 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
USP46P62068 LY6E-213ENST00000522528 606 ntTSL 3 BASIC19.59■□□□□ 0.73
USP46P62068 AF186192.2-201ENST00000524514 423 ntTSL 3 BASIC19.59■□□□□ 0.73
USP46P62068 FGF14-AS2-201ENST00000606448 1074 ntBASIC19.59■□□□□ 0.73
USP46P62068 AC091076.1-201ENST00000610741 619 ntBASIC19.59■□□□□ 0.73
USP46P62068 MED15P9-202ENST00000427638 1841 ntTSL 1 (best) BASIC19.59■□□□□ 0.73
USP46P62068 GOSR2-226ENST00000639287 2367 ntTSL 5 BASIC19.59■□□□□ 0.73
USP46P62068 HEXIM2-201ENST00000307275 1528 ntAPPRIS P1 TSL 2 BASIC19.59■□□□□ 0.73
USP46P62068 MRAS-204ENST00000464896 1534 ntTSL 2 BASIC19.59■□□□□ 0.73
USP46P62068 IRF7-203ENST00000397566 2051 ntAPPRIS P4 TSL 1 (best) BASIC19.59■□□□□ 0.73
USP46P62068 AC008073.3-201ENST00000610442 2281 ntAPPRIS P1 TSL 2 BASIC19.59■□□□□ 0.73
USP46P62068 SNAI3-201ENST00000332281 1732 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
USP46P62068 LINC00466-207ENST00000634725 1736 ntTSL 5 BASIC19.59■□□□□ 0.73
USP46P62068 SCD5-201ENST00000273908 1995 ntTSL 2 BASIC19.59■□□□□ 0.73
USP46P62068 SARAF-214ENST00000545648 1976 ntTSL 1 (best) BASIC19.59■□□□□ 0.73
USP46P62068 SETMAR-206ENST00000430981 1671 ntTSL 1 (best) BASIC19.59■□□□□ 0.73
USP46P62068 ZNF420-201ENST00000304239 1945 ntTSL 2 BASIC19.59■□□□□ 0.73
USP46P62068 AL691447.2-201ENST00000454869 2162 ntTSL 2 BASIC19.59■□□□□ 0.73
USP46P62068 NKX6-1-201ENST00000295886 2628 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.73
USP46P62068 CAB39-202ENST00000409788 1626 ntAPPRIS P1 TSL 2 BASIC19.58■□□□□ 0.73
USP46P62068 ALDH3B1-206ENST00000615463 1300 ntTSL 1 (best) BASIC19.58■□□□□ 0.73
USP46P62068 SEMA3B-210ENST00000611067 2292 ntAPPRIS ALT2 TSL 1 (best) BASIC19.58■□□□□ 0.73
USP46P62068 SIGLEC14-201ENST00000360844 2035 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.73
USP46P62068 UNC5D-204ENST00000420357 2966 ntTSL 5 BASIC19.58■□□□□ 0.73
USP46P62068 LRWD1-201ENST00000292616 2215 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.73
USP46P62068 FAM129C-201ENST00000332386 2222 ntAPPRIS ALT2 TSL 1 (best) BASIC19.58■□□□□ 0.73
USP46P62068 EGFR-202ENST00000342916 2239 ntTSL 1 (best) BASIC19.58■□□□□ 0.73
USP46P62068 CD1E-210ENST00000368165 1003 ntAPPRIS ALT2 TSL 1 (best) BASIC19.58■□□□□ 0.72
USP46P62068 NDUFA1-201ENST00000371437 766 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.72
USP46P62068 CD1E-214ENST00000452291 745 ntTSL 1 (best) BASIC19.58■□□□□ 0.72
USP46P62068 AL445472.1-201ENST00000452532 1007 ntTSL 2 BASIC19.58■□□□□ 0.72
USP46P62068 PTK2-216ENST00000519881 863 ntTSL 3 BASIC19.58■□□□□ 0.72
USP46P62068 RPL26L1-205ENST00000519974 695 ntAPPRIS P1 TSL 3 BASIC19.58■□□□□ 0.72
USP46P62068 ZNF444P1-201ENST00000559497 298 ntBASIC19.58■□□□□ 0.72
USP46P62068 AC132938.3-201ENST00000579095 357 ntTSL 2 BASIC19.58■□□□□ 0.72
USP46P62068 GFOD2-207ENST00000602855 819 ntTSL 3 BASIC19.58■□□□□ 0.72
USP46P62068 AL157888.1-201ENST00000631930 593 ntBASIC19.58■□□□□ 0.72
USP46P62068 AP000550.4-202ENST00000639755 178 ntBASIC19.58■□□□□ 0.72
USP46P62068 KRT8-217ENST00000619952 2437 ntTSL 2 BASIC19.58■□□□□ 0.72
USP46P62068 KCNQ5-207ENST00000403813 6539 ntAPPRIS ALT2 TSL 5 BASIC19.58■□□□□ 0.72
USP46P62068 COL13A1-205ENST00000398978 3093 ntAPPRIS P4 TSL 5 BASIC19.58■□□□□ 0.72
USP46P62068 MYOZ3-203ENST00000517768 1451 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.72
USP46P62068 EVL-202ENST00000402714 2353 ntAPPRIS ALT1 TSL 1 (best) BASIC19.58■□□□□ 0.72
USP46P62068 ANKRD53-202ENST00000360589 1666 ntAPPRIS ALT2 TSL 2 BASIC19.58■□□□□ 0.72
USP46P62068 ISYNA1-206ENST00000578963 1691 ntTSL 1 (best) BASIC19.58■□□□□ 0.72
USP46P62068 SLC25A43-201ENST00000217909 2783 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.72
USP46P62068 HOOK1-201ENST00000371208 5857 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.72
USP46P62068 ACY1-206ENST00000476351 1409 ntTSL 3 BASIC19.58■□□□□ 0.72
USP46P62068 ASPHD2-201ENST00000215906 3357 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.72
USP46P62068 BPTF-201ENST00000306378 9688 ntAPPRIS P2 TSL 1 (best) BASIC19.58■□□□□ 0.72
USP46P62068 CAMKK1-202ENST00000348335 3563 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.72
USP46P62068 IP6K1-204ENST00000468463 1815 ntTSL 5 BASIC19.58■□□□□ 0.72
USP46P62068 PSPC1-206ENST00000619300 2013 ntAPPRIS P1 TSL 5 BASIC19.58■□□□□ 0.72
USP46P62068 VAV1-210ENST00000602142 2620 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
USP46P62068 IQCJ-SCHIP1-207ENST00000638749 2633 ntAPPRIS P3 TSL 1 (best) BASIC19.57■□□□□ 0.72
USP46P62068 CAPS-201ENST00000452990 1789 ntTSL 5 BASIC19.57■□□□□ 0.72
USP46P62068 AKIRIN1-201ENST00000372984 1330 ntTSL 2 BASIC19.57■□□□□ 0.72
USP46P62068 NTMT1-211ENST00000617943 1346 ntTSL 3 BASIC19.57■□□□□ 0.72
USP46P62068 TMEM106C-202ENST00000429772 1515 ntAPPRIS P1 TSL 2 BASIC19.57■□□□□ 0.72
USP46P62068 JPH2-201ENST00000342272 1923 ntTSL 1 (best) BASIC19.57■□□□□ 0.72
USP46P62068 PLEKHA2-206ENST00000521746 2127 ntTSL 5 BASIC19.57■□□□□ 0.72
USP46P62068 ZNF281-202ENST00000367352 2933 ntAPPRIS ALT2 TSL 2 BASIC19.57■□□□□ 0.72
USP46P62068 FOXC1-201ENST00000380874 3926 ntAPPRIS P1 BASIC19.57■□□□□ 0.72
USP46P62068 SPAG16-204ENST00000413312 2258 ntTSL 5 BASIC19.57■□□□□ 0.72
USP46P62068 HEIH-201ENST00000623091 1652 ntBASIC19.57■□□□□ 0.72
USP46P62068 HBZP1-201ENST00000354915 429 ntBASIC19.57■□□□□ 0.72
Retrieved 100 of 98,524 protein–RNA pairs in 47.3 ms