Protein–RNA interactions for Protein: P55056

APOC4, Apolipoprotein C-IV, humanhuman

Predictions only

Length 127 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
APOC4P55056 SDCBP2-203ENST00000381808 1261 ntTSL 1 (best) BASIC13.68□□□□□ -0.22
APOC4P55056 DGUOK-AS1-203ENST00000453103 601 ntTSL 3 BASIC13.68□□□□□ -0.22
APOC4P55056 RASA4DP-201ENST00000460726 1199 ntBASIC13.68□□□□□ -0.22
APOC4P55056 LINC00599-204ENST00000521242 716 ntTSL 3 BASIC13.68□□□□□ -0.22
APOC4P55056 AP006284.1-202ENST00000527113 527 ntTSL 4 BASIC13.68□□□□□ -0.22
APOC4P55056 EEF1D-243ENST00000532400 419 ntTSL 3 BASIC13.68□□□□□ -0.22
APOC4P55056 DUX4-205ENST00000570263 768 ntAPPRIS ALT2 TSL 1 (best) BASIC13.68□□□□□ -0.22
APOC4P55056 SLF2-205ENST00000609386 891 ntAPPRIS ALT2 BASIC13.68□□□□□ -0.22
APOC4P55056 RNASET2-213ENST00000611959 1124 ntTSL 5 BASIC13.68□□□□□ -0.22
APOC4P55056 DNAJB6-218ENST00000634080 1005 ntTSL 2 BASIC13.68□□□□□ -0.22
APOC4P55056 AC064853.5-201ENST00000641976 258 ntAPPRIS P1 BASIC13.68□□□□□ -0.22
APOC4P55056 NR1H2-201ENST00000253727 1998 ntAPPRIS P2 TSL 1 (best) BASIC13.68□□□□□ -0.22
APOC4P55056 TMEM191A-208ENST00000450925 1961 ntTSL 2 BASIC13.68□□□□□ -0.22
APOC4P55056 OSR2-201ENST00000297565 1838 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
APOC4P55056 PGAM1-201ENST00000334828 1830 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
APOC4P55056 UBL4A-202ENST00000369660 2382 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
APOC4P55056 PRMT8-202ENST00000382622 2366 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
APOC4P55056 TOR1B-201ENST00000259339 2769 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
APOC4P55056 SYDE2-202ENST00000341460 5512 ntAPPRIS P1 TSL 5 BASIC13.68□□□□□ -0.22
APOC4P55056 ANKRD13D-202ENST00000447274 2881 ntTSL 1 (best) BASIC13.68□□□□□ -0.22
APOC4P55056 LONP1-203ENST00000585374 2882 ntTSL 5 BASIC13.68□□□□□ -0.22
APOC4P55056 STX5-202ENST00000377897 1785 ntTSL 1 (best) BASIC13.68□□□□□ -0.22
APOC4P55056 AC008556.1-201ENST00000610908 2040 ntBASIC13.68□□□□□ -0.22
APOC4P55056 RELB-207ENST00000625761 2279 ntAPPRIS ALT2 TSL 5 BASIC13.67□□□□□ -0.22
APOC4P55056 HS3ST3A1-201ENST00000284110 2527 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
APOC4P55056 PLEKHG2-202ENST00000409797 2205 ntAPPRIS ALT2 TSL 2 BASIC13.67□□□□□ -0.22
APOC4P55056 ACD-201ENST00000219251 2052 ntAPPRIS P3 TSL 2 BASIC13.67□□□□□ -0.22
APOC4P55056 ARID3C-201ENST00000378909 1411 ntAPPRIS P1 TSL 2 BASIC13.67□□□□□ -0.22
APOC4P55056 LINC02028-204ENST00000449350 1419 ntTSL 3 BASIC13.67□□□□□ -0.22
APOC4P55056 LINC01311-201ENST00000565162 1445 ntBASIC13.67□□□□□ -0.22
APOC4P55056 HOXB1-202ENST00000577092 1414 ntBASIC13.67□□□□□ -0.22
APOC4P55056 SMARCD2-212ENST00000613943 2342 ntTSL 5 BASIC13.67□□□□□ -0.22
APOC4P55056 VBP1-201ENST00000286428 1686 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
APOC4P55056 TSSC4-201ENST00000333256 1686 ntAPPRIS P3 TSL 1 (best) BASIC13.67□□□□□ -0.22
APOC4P55056 ANKRD17-201ENST00000330838 7734 ntAPPRIS ALT2 TSL 2 BASIC13.67□□□□□ -0.22
APOC4P55056 ATOH8-201ENST00000306279 2438 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
APOC4P55056 AFG3L1P-217ENST00000557444 2447 ntBASIC13.67□□□□□ -0.22
APOC4P55056 IGLL1-201ENST00000249053 716 ntTSL 1 (best) BASIC13.67□□□□□ -0.22
APOC4P55056 BCL2L10-201ENST00000260442 1249 ntAPPRIS P3 TSL 1 (best) BASIC13.67□□□□□ -0.22
APOC4P55056 CD1E-211ENST00000368166 1271 ntTSL 1 (best) BASIC13.67□□□□□ -0.22
APOC4P55056 COMTD1-201ENST00000372538 976 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
APOC4P55056 TSPY8-203ENST00000383005 435 ntTSL 5 BASIC13.67□□□□□ -0.22
APOC4P55056 MIR564-202ENST00000385049 94 ntBASIC13.67□□□□□ -0.22
APOC4P55056 PMEPA1-204ENST00000395814 800 ntTSL 3 BASIC13.67□□□□□ -0.22
APOC4P55056 AC093901.1-201ENST00000414886 778 ntTSL 5 BASIC13.67□□□□□ -0.22
APOC4P55056 AC003075.1-204ENST00000433005 540 ntTSL 2 BASIC13.67□□□□□ -0.22
APOC4P55056 PRKCB-209ENST00000498058 480 ntTSL 3 BASIC13.67□□□□□ -0.22
APOC4P55056 RBPMS-AS1-202ENST00000519753 1031 ntTSL 5 BASIC13.67□□□□□ -0.22
APOC4P55056 VENTXP5-201ENST00000523979 775 ntBASIC13.67□□□□□ -0.22
APOC4P55056 AC127526.4-201ENST00000527970 983 ntTSL 3 BASIC13.67□□□□□ -0.22
APOC4P55056 SSSCA1-206ENST00000531405 879 ntTSL 2 BASIC13.67□□□□□ -0.22
APOC4P55056 ZNF444P1-201ENST00000559497 298 ntBASIC13.67□□□□□ -0.22
APOC4P55056 MCRIP1-206ENST00000573478 1123 ntTSL 2 BASIC13.67□□□□□ -0.22
APOC4P55056 AP000550.4-202ENST00000639755 178 ntBASIC13.67□□□□□ -0.22
APOC4P55056 NDUFAB1-201ENST00000007516 717 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
APOC4P55056 EBF4-202ENST00000380648 2910 ntAPPRIS P2 TSL 5 BASIC13.67□□□□□ -0.22
APOC4P55056 HEXIM2-201ENST00000307275 1528 ntAPPRIS P1 TSL 2 BASIC13.67□□□□□ -0.22
APOC4P55056 BDKRB1-202ENST00000553356 1526 ntTSL 1 (best) BASIC13.67□□□□□ -0.22
APOC4P55056 CLMP-201ENST00000448775 5072 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
APOC4P55056 NRXN1-226ENST00000626899 2543 ntTSL 2 BASIC13.67□□□□□ -0.22
APOC4P55056 RNF113B-201ENST00000267291 1376 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
APOC4P55056 CRELD2-201ENST00000328268 1357 ntAPPRIS P3 TSL 1 (best) BASIC13.67□□□□□ -0.22
APOC4P55056 EIF2B1-201ENST00000424014 2477 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
APOC4P55056 ANTXR1-203ENST00000409829 2221 ntTSL 1 (best) BASIC13.67□□□□□ -0.22
APOC4P55056 DHRS7-201ENST00000216500 2322 ntAPPRIS P1 TSL 5 BASIC13.67□□□□□ -0.22
APOC4P55056 CERCAM-202ENST00000372842 5201 ntAPPRIS ALT2 TSL 5 BASIC13.67□□□□□ -0.22
APOC4P55056 PRDX3-201ENST00000298510 1591 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
APOC4P55056 PHOX2B-201ENST00000226382 3030 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
APOC4P55056 TINAGL1-201ENST00000271064 2187 ntAPPRIS P3 TSL 1 (best) BASIC13.66□□□□□ -0.22
APOC4P55056 GNB1-201ENST00000378609 3132 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
APOC4P55056 SLC23A3-201ENST00000295738 2037 ntTSL 1 (best) BASIC13.66□□□□□ -0.22
APOC4P55056 PLEKHH3-201ENST00000293349 2987 ntAPPRIS ALT1 TSL 5 BASIC13.66□□□□□ -0.22
APOC4P55056 C19orf25-201ENST00000427685 1410 ntTSL 2 BASIC13.66□□□□□ -0.22
APOC4P55056 EFS-202ENST00000351354 2704 ntTSL 1 (best) BASIC13.66□□□□□ -0.22
APOC4P55056 TMEM176A-210ENST00000484928 1530 ntAPPRIS P2 TSL 5 BASIC13.66□□□□□ -0.22
APOC4P55056 DMD-208ENST00000378680 1858 ntTSL 1 (best) BASIC13.66□□□□□ -0.22
APOC4P55056 FAM208B-201ENST00000328090 8626 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
APOC4P55056 CXADR-201ENST00000284878 6254 ntAPPRIS P3 TSL 1 (best) BASIC13.66□□□□□ -0.22
APOC4P55056 HOXD10-201ENST00000249501 1989 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
APOC4P55056 GPX4-201ENST00000354171 919 ntAPPRIS P2 TSL 1 (best) BASIC13.66□□□□□ -0.22
APOC4P55056 TNFRSF10C-202ENST00000397703 1242 ntTSL 2 BASIC13.66□□□□□ -0.22
APOC4P55056 KRTAP5-10-201ENST00000398531 1176 ntAPPRIS P1 BASIC13.66□□□□□ -0.22
APOC4P55056 C12orf43-206ENST00000537817 1270 ntAPPRIS ALT2 TSL 1 (best) BASIC13.66□□□□□ -0.22
APOC4P55056 DHRS2-210ENST00000611765 1287 ntAPPRIS ALT2 TSL 2 BASIC13.66□□□□□ -0.22
APOC4P55056 AL358472.4-201ENST00000633140 710 ntBASIC13.66□□□□□ -0.22
APOC4P55056 NFKBIZ-201ENST00000326151 2058 ntTSL 2 BASIC13.66□□□□□ -0.22
APOC4P55056 MTFR1L-202ENST00000374301 2099 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
APOC4P55056 SEPT8-201ENST00000296873 4394 ntAPPRIS P2 TSL 1 (best) BASIC13.66□□□□□ -0.22
APOC4P55056 ERLIN2-202ENST00000335171 1742 ntTSL 1 (best) BASIC13.66□□□□□ -0.22
APOC4P55056 GNAI1-201ENST00000351004 3347 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
APOC4P55056 IER3-202ENST00000376377 1350 ntBASIC13.66□□□□□ -0.22
APOC4P55056 MYC-205ENST00000524013 2150 ntAPPRIS ALT1 TSL 1 (best) BASIC13.66□□□□□ -0.22
APOC4P55056 MARCH9-201ENST00000266643 2982 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
APOC4P55056 SMC4-201ENST00000344722 5356 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
APOC4P55056 LCORL-203ENST00000382226 5009 ntAPPRIS P2 TSL 5 BASIC13.66□□□□□ -0.22
APOC4P55056 AP5S1-203ENST00000379573 1848 ntTSL 1 (best) BASIC13.66□□□□□ -0.22
APOC4P55056 KDM6A-213ENST00000611820 5924 ntTSL 1 (best) BASIC13.66□□□□□ -0.22
APOC4P55056 AC009133.6-201ENST00000609618 2252 ntAPPRIS P1 TSL 5 BASIC13.66□□□□□ -0.22
APOC4P55056 PALM-202ENST00000338448 2725 ntAPPRIS P4 TSL 1 (best) BASIC13.66□□□□□ -0.22
APOC4P55056 NUDT16-201ENST00000502852 1552 ntTSL 2 BASIC13.66□□□□□ -0.22
Retrieved 100 of 98,524 protein–RNA pairs in 24.4 ms