Protein–RNA interactions for Protein: P52738

ZNF140, Zinc finger protein 140, humanhuman

Predicted RBP Predictions only

Length 457 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ZNF140P52738 KRT18P23-201ENST00000435622 1283 ntBASIC18.55■□□□□ 0.56
ZNF140P52738 AC002467.1-201ENST00000457510 657 ntTSL 3 BASIC18.55■□□□□ 0.56
ZNF140P52738 MNX1-AS1-201ENST00000480284 1041 ntTSL 1 (best) BASIC18.55■□□□□ 0.56
ZNF140P52738 TMEM249-203ENST00000565365 975 ntAPPRIS P2 TSL 3 BASIC18.55■□□□□ 0.56
ZNF140P52738 AC022154.1-201ENST00000600303 766 ntTSL 3 BASIC18.55■□□□□ 0.56
ZNF140P52738 GRB10-205ENST00000401949 2627 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
ZNF140P52738 MAML1-201ENST00000292599 5723 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
ZNF140P52738 HOXC11-201ENST00000243082 2039 ntTSL 3 BASIC18.55■□□□□ 0.56
ZNF140P52738 TRPM4-213ENST00000599628 1829 ntTSL 2 BASIC18.55■□□□□ 0.56
ZNF140P52738 SLC2A11-204ENST00000398356 2388 ntTSL 1 (best) BASIC18.55■□□□□ 0.56
ZNF140P52738 DMRT3-201ENST00000190165 2183 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
ZNF140P52738 TSR1-201ENST00000301364 5188 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
ZNF140P52738 NPR3-204ENST00000434067 2715 ntTSL 5 BASIC18.55■□□□□ 0.56
ZNF140P52738 FAM90A1-201ENST00000307435 2342 ntAPPRIS P1 TSL 2 BASIC18.55■□□□□ 0.56
ZNF140P52738 FCER2-201ENST00000346664 1596 ntAPPRIS P2 TSL 1 (best) BASIC18.55■□□□□ 0.56
ZNF140P52738 FCER2-205ENST00000597921 1560 ntAPPRIS P2 TSL 1 (best) BASIC18.55■□□□□ 0.56
ZNF140P52738 CHRAC1-201ENST00000220913 2488 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
ZNF140P52738 GAS2L1-210ENST00000621062 2483 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
ZNF140P52738 SPTBN4-201ENST00000338932 8686 ntAPPRIS ALT1 TSL 5 BASIC18.55■□□□□ 0.56
ZNF140P52738 SLC16A13-201ENST00000308027 1748 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
ZNF140P52738 STEAP1B-201ENST00000404369 1515 ntAPPRIS ALT2 TSL 1 (best) BASIC18.54■□□□□ 0.56
ZNF140P52738 GAS7-210ENST00000579158 1528 ntTSL 1 (best) BASIC18.54■□□□□ 0.56
ZNF140P52738 PNKP-224ENST00000631020 1545 ntTSL 5 BASIC18.54■□□□□ 0.56
ZNF140P52738 TMTC1-203ENST00000539277 2758 ntAPPRIS P2 TSL 1 (best) BASIC18.54■□□□□ 0.56
ZNF140P52738 NES-201ENST00000368223 5558 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
ZNF140P52738 CUTC-202ENST00000370476 1346 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
ZNF140P52738 VLDLR-AS1-205ENST00000599229 1346 ntTSL 1 (best) BASIC18.54■□□□□ 0.56
ZNF140P52738 KRAS-203ENST00000556131 1696 ntTSL 1 (best) BASIC18.54■□□□□ 0.56
ZNF140P52738 GLS-202ENST00000338435 4475 ntAPPRIS ALT1 TSL 1 (best) BASIC18.54■□□□□ 0.56
ZNF140P52738 FAM3A-201ENST00000322269 1815 ntTSL 5 BASIC18.54■□□□□ 0.56
ZNF140P52738 BTBD1-202ENST00000379403 1467 ntTSL 5 BASIC18.54■□□□□ 0.56
ZNF140P52738 RARRES1-201ENST00000237696 1952 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
ZNF140P52738 SCD5-201ENST00000273908 1995 ntTSL 2 BASIC18.54■□□□□ 0.56
ZNF140P52738 HOOK1-201ENST00000371208 5857 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
ZNF140P52738 DGCR6L-201ENST00000248879 1154 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
ZNF140P52738 FAM212A-201ENST00000333323 1040 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
ZNF140P52738 RHOC-204ENST00000369633 1295 ntAPPRIS P1 TSL 3 BASIC18.54■□□□□ 0.56
ZNF140P52738 FAHD2CP-202ENST00000443258 893 ntTSL 3 BASIC18.54■□□□□ 0.56
ZNF140P52738 REPIN1-210ENST00000482680 1029 ntTSL 2 BASIC18.54■□□□□ 0.56
ZNF140P52738 NT5C-210ENST00000582160 860 ntTSL 2 BASIC18.54■□□□□ 0.56
ZNF140P52738 AC008735.6-201ENST00000635964 1292 ntAPPRIS P1 TSL 2 BASIC18.54■□□□□ 0.56
ZNF140P52738 AC097493.4-201ENST00000641197 219 ntBASIC18.54■□□□□ 0.56
ZNF140P52738 CHPF-203ENST00000535926 2634 ntTSL 2 BASIC18.54■□□□□ 0.56
ZNF140P52738 TBC1D9-201ENST00000442267 5306 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
ZNF140P52738 CLN8-211ENST00000636934 1790 ntTSL 5 BASIC18.54■□□□□ 0.56
ZNF140P52738 CABP7-201ENST00000216144 3259 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
ZNF140P52738 KRT8P7-201ENST00000533003 1432 ntBASIC18.54■□□□□ 0.56
ZNF140P52738 FBXW9-203ENST00000587955 1437 ntTSL 1 (best) BASIC18.54■□□□□ 0.56
ZNF140P52738 THOC3-212ENST00000628318 1442 ntTSL 5 BASIC18.54■□□□□ 0.56
ZNF140P52738 MLX-201ENST00000246912 2586 ntAPPRIS P3 TSL 1 (best) BASIC18.54■□□□□ 0.56
ZNF140P52738 PCED1A-201ENST00000356872 1706 ntTSL 2 BASIC18.54■□□□□ 0.56
ZNF140P52738 FAM49B-214ENST00000519540 2021 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
ZNF140P52738 BANP-202ENST00000355022 2164 ntTSL 1 (best) BASIC18.54■□□□□ 0.56
ZNF140P52738 EGFL7-204ENST00000406555 1529 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
ZNF140P52738 CYP51A1P1-201ENST00000492267 1507 ntBASIC18.54■□□□□ 0.56
ZNF140P52738 RNF146-201ENST00000309649 2624 ntAPPRIS P3 TSL 4 BASIC18.53■□□□□ 0.56
ZNF140P52738 ZNF74-203ENST00000403682 2789 ntTSL 1 (best) BASIC18.53■□□□□ 0.56
ZNF140P52738 LONP1-215ENST00000593119 2918 ntTSL 2 BASIC18.53■□□□□ 0.56
ZNF140P52738 ART1-201ENST00000250693 1312 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
ZNF140P52738 KCNIP4-205ENST00000382152 1767 ntTSL 5 BASIC18.53■□□□□ 0.56
ZNF140P52738 KANSL1L-203ENST00000418791 3562 ntTSL 1 (best) BASIC18.53■□□□□ 0.56
ZNF140P52738 TMEM160-201ENST00000253047 663 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
ZNF140P52738 CALHM2-201ENST00000260743 1859 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
ZNF140P52738 TMEM234-201ENST00000309777 1082 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
ZNF140P52738 HCLS1-201ENST00000314583 2000 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
ZNF140P52738 PDE9A-206ENST00000380328 1875 ntTSL 1 (best) BASIC18.53■□□□□ 0.56
ZNF140P52738 MROH1-202ENST00000423230 1712 ntTSL 1 (best) BASIC18.53■□□□□ 0.56
ZNF140P52738 SLC25A3P1-201ENST00000443844 931 ntBASIC18.53■□□□□ 0.56
ZNF140P52738 AC009947.2-201ENST00000444014 672 ntBASIC18.53■□□□□ 0.56
ZNF140P52738 NECTIN3-206ENST00000485303 3664 ntAPPRIS P3 TSL 1 (best) BASIC18.53■□□□□ 0.56
ZNF140P52738 NAT14-202ENST00000587400 416 ntTSL 5 BASIC18.53■□□□□ 0.56
ZNF140P52738 GPX4-207ENST00000589115 812 ntTSL 2 BASIC18.53■□□□□ 0.56
ZNF140P52738 PHOSPHO2-206ENST00000616481 1252 ntAPPRIS P1 TSL 3 BASIC18.53■□□□□ 0.56
ZNF140P52738 PHOSPHO2-208ENST00000617738 1053 ntAPPRIS P1 TSL 2 BASIC18.53■□□□□ 0.56
ZNF140P52738 PITPNB-211ENST00000634017 1017 ntAPPRIS ALT1 TSL 2 BASIC18.53■□□□□ 0.56
ZNF140P52738 AC133561.5-201ENST00000635547 218 ntBASIC18.53■□□□□ 0.56
ZNF140P52738 CTSD-212ENST00000637815 2003 ntAPPRIS ALT2 TSL 5 BASIC18.53■□□□□ 0.56
ZNF140P52738 SLC9A6-202ENST00000370698 4631 ntTSL 1 (best) BASIC18.53■□□□□ 0.56
ZNF140P52738 ILK-203ENST00000420936 1692 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
ZNF140P52738 PPP2R2C-206ENST00000507294 1667 ntTSL 2 BASIC18.53■□□□□ 0.56
ZNF140P52738 SMARCC2-203ENST00000394023 4271 ntAPPRIS ALT2 TSL 1 (best) BASIC18.53■□□□□ 0.56
ZNF140P52738 GORASP1-206ENST00000422110 2523 ntTSL 2 BASIC18.53■□□□□ 0.56
ZNF140P52738 RELL2-202ENST00000444782 2154 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
ZNF140P52738 CIRBP-201ENST00000320936 1328 ntAPPRIS P3 TSL 1 (best) BASIC18.52■□□□□ 0.56
ZNF140P52738 CIRBP-207ENST00000586472 1303 ntAPPRIS P3 TSL 3 BASIC18.52■□□□□ 0.56
ZNF140P52738 DHRS11-210ENST00000611337 1341 ntTSL 5 BASIC18.52■□□□□ 0.56
ZNF140P52738 KCNA3-201ENST00000369769 2569 ntAPPRIS P1 BASIC18.52■□□□□ 0.56
ZNF140P52738 MCOLN2-201ENST00000284027 1729 ntAPPRIS P1 TSL 5 BASIC18.52■□□□□ 0.56
ZNF140P52738 KRBOX1-AS1-201ENST00000447834 2134 ntTSL 2 BASIC18.52■□□□□ 0.56
ZNF140P52738 WIPI1-202ENST00000546360 1575 ntTSL 2 BASIC18.52■□□□□ 0.56
ZNF140P52738 TNNC1-201ENST00000232975 714 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
ZNF140P52738 POMZP3-201ENST00000275569 1259 ntTSL 2 BASIC18.52■□□□□ 0.56
ZNF140P52738 TMEM88B-201ENST00000378821 492 ntAPPRIS P1 TSL 2 BASIC18.52■□□□□ 0.56
ZNF140P52738 TRPT1-202ENST00000394546 1058 ntAPPRIS ALT1 TSL 5 BASIC18.52■□□□□ 0.56
ZNF140P52738 SLC25A48-202ENST00000412661 1148 ntTSL 1 (best) BASIC18.52■□□□□ 0.56
ZNF140P52738 ECEL1P3-201ENST00000427961 737 ntBASIC18.52■□□□□ 0.56
ZNF140P52738 SLC25A48-204ENST00000433282 1111 ntAPPRIS P1 TSL 5 BASIC18.52■□□□□ 0.56
ZNF140P52738 AC013402.1-201ENST00000456999 561 ntTSL 4 BASIC18.52■□□□□ 0.56
ZNF140P52738 TMUB1-205ENST00000482202 899 ntAPPRIS P1 TSL 3 BASIC18.52■□□□□ 0.56
ZNF140P52738 TRPT1-210ENST00000541278 941 ntTSL 2 BASIC18.52■□□□□ 0.56
Retrieved 100 of 98,524 protein–RNA pairs in 19.3 ms