Protein–RNA interactions for Protein: P43003

SLC1A3, Excitatory amino acid transporter 1, humanhuman

Predictions only

Length 542 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SLC1A3P43003 HERPUD2-202ENST00000396081 3057 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
SLC1A3P43003 PEX26-203ENST00000428061 815 ntTSL 1 (best) BASIC17.17■□□□□ 0.34
SLC1A3P43003 AKIP1-206ENST00000525005 1128 ntTSL 2 BASIC17.17■□□□□ 0.34
SLC1A3P43003 AC004803.1-203ENST00000539259 501 ntTSL 2 BASIC17.17■□□□□ 0.34
SLC1A3P43003 AC044860.1-201ENST00000560756 1160 ntTSL 1 (best) BASIC17.17■□□□□ 0.34
SLC1A3P43003 EIF4ENIF1-202ENST00000344710 3115 ntTSL 1 (best) BASIC17.17■□□□□ 0.34
SLC1A3P43003 TNPO2-203ENST00000450764 4993 ntAPPRIS ALT1 TSL 1 (best) BASIC17.17■□□□□ 0.34
SLC1A3P43003 MATN4-203ENST00000372754 2200 ntAPPRIS ALT2 TSL 5 BASIC17.17■□□□□ 0.34
SLC1A3P43003 BCL7A-203ENST00000538010 6247 ntTSL 1 (best) BASIC17.17■□□□□ 0.34
SLC1A3P43003 MFSD10-202ENST00000355443 1753 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
SLC1A3P43003 NPEPL1-203ENST00000525817 1780 ntTSL 2 BASIC17.17■□□□□ 0.34
SLC1A3P43003 GUCY1A2-201ENST00000282249 3047 ntTSL 1 (best) BASIC17.17■□□□□ 0.34
SLC1A3P43003 SOCS3-201ENST00000330871 2734 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
SLC1A3P43003 GPR42-201ENST00000454971 1804 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
SLC1A3P43003 ACBD4-215ENST00000592162 1684 ntTSL 5 BASIC17.16■□□□□ 0.34
SLC1A3P43003 ZSWIM5-201ENST00000359600 5819 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
SLC1A3P43003 CRYBB2P1-202ENST00000382734 1364 ntTSL 1 (best) BASIC17.16■□□□□ 0.34
SLC1A3P43003 AC022916.1-201ENST00000590478 2658 ntTSL 2 BASIC17.16■□□□□ 0.34
SLC1A3P43003 AC114490.1-202ENST00000311990 1887 ntTSL 1 (best) BASIC17.16■□□□□ 0.34
SLC1A3P43003 NECTIN3-211ENST00000493615 1876 ntAPPRIS ALT2 TSL 2 BASIC17.16■□□□□ 0.34
SLC1A3P43003 LRRC36-201ENST00000329956 2395 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
SLC1A3P43003 P2RY6-208ENST00000540124 2351 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
SLC1A3P43003 SPAG1-206ENST00000520643 1723 ntTSL 2 BASIC17.16■□□□□ 0.34
SLC1A3P43003 MFSD1-201ENST00000264266 1594 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
SLC1A3P43003 STARD3-201ENST00000336308 2132 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
SLC1A3P43003 FUOM-203ENST00000368552 762 ntTSL 1 (best) BASIC17.16■□□□□ 0.34
SLC1A3P43003 AL390728.5-201ENST00000428687 706 ntTSL 3 BASIC17.16■□□□□ 0.34
SLC1A3P43003 AC091153.3-201ENST00000497885 472 ntTSL 2 BASIC17.16■□□□□ 0.34
SLC1A3P43003 FAM86C2P-201ENST00000525180 435 ntTSL 4 BASIC17.16■□□□□ 0.34
SLC1A3P43003 GCHFR-205ENST00000559932 695 ntTSL 2 BASIC17.16■□□□□ 0.34
SLC1A3P43003 AP003071.4-201ENST00000562276 1284 ntBASIC17.16■□□□□ 0.34
SLC1A3P43003 SLC25A1P4-201ENST00000567977 778 ntBASIC17.16■□□□□ 0.34
SLC1A3P43003 AP005263.1-201ENST00000579126 914 ntTSL 2 BASIC17.16■□□□□ 0.34
SLC1A3P43003 CIRBP-217ENST00000588230 1013 ntTSL 5 BASIC17.16■□□□□ 0.34
SLC1A3P43003 AC003005.1-201ENST00000601674 582 ntAPPRIS P5 TSL 2 BASIC17.16■□□□□ 0.34
SLC1A3P43003 MARK4-211ENST00000622871 1147 ntTSL 1 (best) BASIC17.16■□□□□ 0.34
SLC1A3P43003 QSOX2-201ENST00000358701 4530 ntAPPRIS P1 TSL 2 BASIC17.16■□□□□ 0.34
SLC1A3P43003 RHOU-201ENST00000366691 4372 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
SLC1A3P43003 NOMO3-202ENST00000399336 4356 ntAPPRIS P2 TSL 1 (best) BASIC17.16■□□□□ 0.34
SLC1A3P43003 PTPRJ-202ENST00000440289 3158 ntTSL 1 (best) BASIC17.16■□□□□ 0.34
SLC1A3P43003 C14orf180-201ENST00000331952 1455 ntAPPRIS ALT2 TSL 2 BASIC17.16■□□□□ 0.34
SLC1A3P43003 FAM3A-201ENST00000322269 1815 ntTSL 5 BASIC17.16■□□□□ 0.34
SLC1A3P43003 KANSL1L-203ENST00000418791 3562 ntTSL 1 (best) BASIC17.16■□□□□ 0.34
SLC1A3P43003 PCDHB18P-201ENST00000524813 2368 ntBASIC17.16■□□□□ 0.34
SLC1A3P43003 LRP1-204ENST00000553277 1693 ntTSL 1 (best) BASIC17.16■□□□□ 0.34
SLC1A3P43003 CD151-201ENST00000322008 1548 ntAPPRIS P2 TSL 1 (best) BASIC17.16■□□□□ 0.34
SLC1A3P43003 TNFRSF1A-213ENST00000540022 1527 ntTSL 1 (best) BASIC17.16■□□□□ 0.34
SLC1A3P43003 KCTD12-201ENST00000377474 6225 ntAPPRIS P1 BASIC17.16■□□□□ 0.34
SLC1A3P43003 CLN8-211ENST00000636934 1790 ntTSL 5 BASIC17.15■□□□□ 0.34
SLC1A3P43003 RSPO4-201ENST00000217260 2707 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
SLC1A3P43003 EPB41L2-211ENST00000525271 2568 ntTSL 2 BASIC17.15■□□□□ 0.34
SLC1A3P43003 CNOT9-209ENST00000627282 1621 ntTSL 2 BASIC17.15■□□□□ 0.34
SLC1A3P43003 VAV1-204ENST00000596764 2775 ntTSL 2 BASIC17.15■□□□□ 0.34
SLC1A3P43003 SAMD5-201ENST00000367474 6089 ntAPPRIS P1 TSL 2 BASIC17.15■□□□□ 0.34
SLC1A3P43003 CTSD-212ENST00000637815 2003 ntAPPRIS ALT2 TSL 5 BASIC17.15■□□□□ 0.34
SLC1A3P43003 IMMP2L-201ENST00000331762 1205 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
SLC1A3P43003 AC093620.1-201ENST00000342963 583 ntTSL 3 BASIC17.15■□□□□ 0.34
SLC1A3P43003 AC073343.2-203ENST00000366167 564 ntTSL 4 BASIC17.15■□□□□ 0.34
SLC1A3P43003 UPK3B-203ENST00000394849 1041 ntAPPRIS ALT2 TSL 2 BASIC17.15■□□□□ 0.34
SLC1A3P43003 AC092718.1-201ENST00000501068 1088 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
SLC1A3P43003 USP46-AS1-201ENST00000503051 1048 ntTSL 3 BASIC17.15■□□□□ 0.34
SLC1A3P43003 AC097488.1-201ENST00000507834 756 ntBASIC17.15■□□□□ 0.34
SLC1A3P43003 TGIF1-222ENST00000577543 729 ntTSL 3 BASIC17.15■□□□□ 0.34
SLC1A3P43003 MIR4785-201ENST00000585005 73 ntBASIC17.15■□□□□ 0.34
SLC1A3P43003 GRAMD4P8-201ENST00000605465 1115 ntBASIC17.15■□□□□ 0.34
SLC1A3P43003 KRT8P32-201ENST00000512863 1461 ntBASIC17.15■□□□□ 0.34
SLC1A3P43003 HEIH-201ENST00000623091 1652 ntBASIC17.15■□□□□ 0.34
SLC1A3P43003 PLEKHG5-201ENST00000340850 4715 ntAPPRIS P3 TSL 5 BASIC17.15■□□□□ 0.34
SLC1A3P43003 PLEKHG5-211ENST00000535355 4725 ntAPPRIS ALT2 TSL 2 BASIC17.15■□□□□ 0.34
SLC1A3P43003 NOV-201ENST00000259526 2522 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
SLC1A3P43003 HNF1A-202ENST00000400024 2337 ntTSL 2 BASIC17.15■□□□□ 0.34
SLC1A3P43003 IGFALS-202ENST00000415638 2136 ntTSL 2 BASIC17.15■□□□□ 0.34
SLC1A3P43003 NOC2LP2-201ENST00000407594 1944 ntBASIC17.15■□□□□ 0.34
SLC1A3P43003 ATRN-201ENST00000262919 8633 ntAPPRIS P4 TSL 5 BASIC17.15■□□□□ 0.34
SLC1A3P43003 CDC14B-208ENST00000463569 1734 ntAPPRIS ALT2 TSL 5 BASIC17.15■□□□□ 0.34
SLC1A3P43003 ANKS3-230ENST00000614075 2387 ntAPPRIS P1 TSL 5 BASIC17.15■□□□□ 0.34
SLC1A3P43003 GTF2IP4-202ENST00000544802 3609 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
SLC1A3P43003 FGFR3-202ENST00000340107 4293 ntAPPRIS ALT2 TSL 5 BASIC17.15■□□□□ 0.34
SLC1A3P43003 GAS7-205ENST00000542249 1799 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
SLC1A3P43003 MMD2-202ENST00000404774 2415 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
SLC1A3P43003 PPP2R2C-209ENST00000515571 1832 ntTSL 1 (best) BASIC17.14■□□□□ 0.34
SLC1A3P43003 GJA4-201ENST00000342280 1622 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
SLC1A3P43003 LTBP3-202ENST00000322147 4046 ntAPPRIS P3 TSL 1 (best) BASIC17.14■□□□□ 0.33
SLC1A3P43003 PIGH-201ENST00000216452 1420 ntAPPRIS P2 TSL 1 (best) BASIC17.14■□□□□ 0.33
SLC1A3P43003 KRT5-201ENST00000252242 2531 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
SLC1A3P43003 PRDM14-201ENST00000276594 2344 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
SLC1A3P43003 ZNF74-203ENST00000403682 2789 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
SLC1A3P43003 RBM42-201ENST00000262633 1680 ntAPPRIS P2 TSL 1 (best) BASIC17.14■□□□□ 0.33
SLC1A3P43003 PRSS33-201ENST00000293851 1694 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
SLC1A3P43003 ZNF787-202ENST00000587279 1657 ntTSL 2 BASIC17.14■□□□□ 0.33
SLC1A3P43003 PLEKHA2-206ENST00000521746 2127 ntTSL 5 BASIC17.14■□□□□ 0.33
SLC1A3P43003 PDE4A-202ENST00000344979 2579 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
SLC1A3P43003 COBL-210ENST00000632460 1941 ntTSL 5 BASIC17.14■□□□□ 0.33
SLC1A3P43003 ETV2-203ENST00000402764 1487 ntAPPRIS P3 TSL 1 (best) BASIC17.14■□□□□ 0.33
SLC1A3P43003 OGFOD2-222ENST00000545317 1481 ntTSL 2 BASIC17.14■□□□□ 0.33
SLC1A3P43003 NRBP1-203ENST00000379852 2163 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
SLC1A3P43003 VKORC1-204ENST00000394971 664 ntTSL 5 BASIC17.14■□□□□ 0.33
SLC1A3P43003 UBB-203ENST00000395839 1012 ntAPPRIS P1 TSL 2 BASIC17.14■□□□□ 0.33
SLC1A3P43003 C7orf50-203ENST00000397100 1264 ntAPPRIS P2 TSL 3 BASIC17.14■□□□□ 0.33
SLC1A3P43003 MFAP1P1-201ENST00000442257 1255 ntBASIC17.14■□□□□ 0.33
Retrieved 100 of 98,524 protein–RNA pairs in 37.5 ms