Protein–RNA interactions for Protein: P41002

CCNF, Cyclin-F, humanhuman

Predictions only

Length 786 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCNFP41002 NLGN2-204ENST00000575301 4374 ntAPPRIS P1 TSL 5 BASIC18.78■□□□□ 0.6
CCNFP41002 TMEM235-203ENST00000550981 1786 ntTSL 2 BASIC18.78■□□□□ 0.6
CCNFP41002 SMARCC2-201ENST00000267064 4076 ntAPPRIS P4 TSL 1 (best) BASIC18.78■□□□□ 0.6
CCNFP41002 PTN-201ENST00000348225 1614 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
CCNFP41002 SLC39A5-201ENST00000266980 2031 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
CCNFP41002 KCNN4-209ENST00000615047 2029 ntTSL 5 BASIC18.78■□□□□ 0.6
CCNFP41002 OSM-201ENST00000215781 1854 ntAPPRIS P3 TSL 1 (best) BASIC18.77■□□□□ 0.6
CCNFP41002 NECTIN3-211ENST00000493615 1876 ntAPPRIS ALT2 TSL 2 BASIC18.77■□□□□ 0.6
CCNFP41002 TRPV4-208ENST00000544971 2295 ntTSL 1 (best) BASIC18.77■□□□□ 0.6
CCNFP41002 XKR8-201ENST00000373884 2692 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
CCNFP41002 GRB10-201ENST00000335866 5032 ntTSL 1 (best) BASIC18.77■□□□□ 0.6
CCNFP41002 ACSM2A-201ENST00000219054 1988 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
CCNFP41002 CCDC157-201ENST00000338306 3001 ntAPPRIS P3 TSL 5 BASIC18.77■□□□□ 0.6
CCNFP41002 SMPD3-201ENST00000219334 5453 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
CCNFP41002 TNFSF9-201ENST00000245817 1665 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
CCNFP41002 ZNF394-201ENST00000337673 2179 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
CCNFP41002 SYNGR1-201ENST00000216155 497 ntTSL 3 BASIC18.77■□□□□ 0.6
CCNFP41002 C1QBP-201ENST00000225698 1169 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
CCNFP41002 PTPA-216ENST00000432651 857 ntTSL 2 BASIC18.77■□□□□ 0.6
CCNFP41002 AL359747.1-201ENST00000442370 536 ntTSL 2 BASIC18.77■□□□□ 0.6
CCNFP41002 KCNMA1-220ENST00000481070 896 ntTSL 2 BASIC18.77■□□□□ 0.6
CCNFP41002 KHDRBS1-204ENST00000492989 1215 ntTSL 1 (best) BASIC18.77■□□□□ 0.6
CCNFP41002 DDX42-202ENST00000389924 3939 ntAPPRIS P1 TSL 5 BASIC18.77■□□□□ 0.6
CCNFP41002 SLC29A4-202ENST00000396872 5685 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
CCNFP41002 SH3GLB2-202ENST00000372559 1365 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
CCNFP41002 GPBAR1-202ENST00000519574 1382 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
CCNFP41002 POLI-207ENST00000579434 2705 ntTSL 1 (best) BASIC18.77■□□□□ 0.59
CCNFP41002 AL590648.2-201ENST00000427949 2225 ntTSL 2 BASIC18.77■□□□□ 0.59
CCNFP41002 BMP2K-208ENST00000628286 3848 ntAPPRIS ALT2 TSL 5 BASIC18.77■□□□□ 0.59
CCNFP41002 UBE2N-201ENST00000318066 5186 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.59
CCNFP41002 C7orf49-202ENST00000424142 1738 ntTSL 2 BASIC18.77■□□□□ 0.59
CCNFP41002 PROSER2-201ENST00000277570 3333 ntAPPRIS P2 TSL 1 (best) BASIC18.77■□□□□ 0.59
CCNFP41002 DISP3-202ENST00000304391 1495 ntTSL 1 (best) BASIC18.77■□□□□ 0.59
CCNFP41002 LRRN4CL-201ENST00000317449 2585 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.59
CCNFP41002 AJUBA-202ENST00000361265 2569 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.59
CCNFP41002 SNX14-210ENST00000505648 3193 ntTSL 2 BASIC18.77■□□□□ 0.59
CCNFP41002 HCK-202ENST00000375852 2082 ntAPPRIS ALT2 TSL 1 (best) BASIC18.77■□□□□ 0.59
CCNFP41002 ADAMTS8-201ENST00000257359 4010 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.59
CCNFP41002 PDLIM7-203ENST00000359895 1567 ntAPPRIS ALT2 TSL 1 (best) BASIC18.76■□□□□ 0.59
CCNFP41002 RCC2P6-201ENST00000526625 1557 ntBASIC18.76■□□□□ 0.59
CCNFP41002 ANKRD18DP-201ENST00000335478 2171 ntTSL 2 BASIC18.76■□□□□ 0.59
CCNFP41002 GCSH-208ENST00000639169 2537 ntTSL 2 BASIC18.76■□□□□ 0.59
CCNFP41002 NFYC-AS1-201ENST00000606277 1687 ntBASIC18.76■□□□□ 0.59
CCNFP41002 WISP2-201ENST00000190983 1403 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
CCNFP41002 PIGV-201ENST00000078527 2367 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
CCNFP41002 MYBL2-202ENST00000396863 2704 ntTSL 2 BASIC18.76■□□□□ 0.59
CCNFP41002 FOXP1-214ENST00000493089 2703 ntAPPRIS ALT1 TSL 2 BASIC18.76■□□□□ 0.59
CCNFP41002 RABL6-201ENST00000311502 3091 ntAPPRIS P3 TSL 1 (best) BASIC18.76■□□□□ 0.59
CCNFP41002 KRT8P41-201ENST00000533985 1514 ntBASIC18.76■□□□□ 0.59
CCNFP41002 GATB-213ENST00000515812 1893 ntTSL 5 BASIC18.76■□□□□ 0.59
CCNFP41002 AC067852.2-201ENST00000590513 2313 ntBASIC18.76■□□□□ 0.59
CCNFP41002 GLYCTK-202ENST00000436784 1982 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
CCNFP41002 CXCL3-201ENST00000296026 1075 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
CCNFP41002 IGHV3-73-201ENST00000390636 437 ntAPPRIS P1 BASIC18.76■□□□□ 0.59
CCNFP41002 AC004980.1-204ENST00000429707 299 ntBASIC18.76■□□□□ 0.59
CCNFP41002 AP000697.1-201ENST00000430607 339 ntTSL 5 BASIC18.76■□□□□ 0.59
CCNFP41002 AC005056.1-201ENST00000435932 532 ntTSL 4 BASIC18.76■□□□□ 0.59
CCNFP41002 NDUFB2-203ENST00000461457 559 ntTSL 3 BASIC18.76■□□□□ 0.59
CCNFP41002 MRPL2-207ENST00000487429 905 ntTSL 1 (best) BASIC18.76■□□□□ 0.59
CCNFP41002 EIF3J-AS1-205ENST00000560750 1093 ntTSL 3 BASIC18.76■□□□□ 0.59
CCNFP41002 CDIPT-204ENST00000563415 1047 ntTSL 3 BASIC18.76■□□□□ 0.59
CCNFP41002 CD177P1-201ENST00000606252 935 ntBASIC18.76■□□□□ 0.59
CCNFP41002 AL049637.2-201ENST00000641778 930 ntBASIC18.76■□□□□ 0.59
CCNFP41002 AC068587.9-201ENST00000641814 219 ntBASIC18.76■□□□□ 0.59
CCNFP41002 TDRKH-207ENST00000458431 2768 ntAPPRIS P2 TSL 1 (best) BASIC18.76■□□□□ 0.59
CCNFP41002 DYNLL1-209ENST00000550845 1376 ntTSL 1 (best) BASIC18.76■□□□□ 0.59
CCNFP41002 DUS1L-202ENST00000354321 2151 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
CCNFP41002 PCBP3-205ENST00000400310 2168 ntTSL 2 BASIC18.76■□□□□ 0.59
CCNFP41002 HSDL1-202ENST00000434463 1493 ntTSL 2 BASIC18.76■□□□□ 0.59
CCNFP41002 ANKRD29-201ENST00000322980 1658 ntTSL 2 BASIC18.76■□□□□ 0.59
CCNFP41002 PNKP-207ENST00000596014 1665 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
CCNFP41002 KMT5A-202ENST00000402868 3140 ntAPPRIS P2 TSL 1 (best) BASIC18.76■□□□□ 0.59
CCNFP41002 LRRC32-202ENST00000404995 2656 ntAPPRIS P1 TSL 5 BASIC18.76■□□□□ 0.59
CCNFP41002 WNK2-204ENST00000427277 6108 ntTSL 5 BASIC18.76■□□□□ 0.59
CCNFP41002 TXNL1-211ENST00000590954 1339 ntAPPRIS P1 TSL 2 BASIC18.75■□□□□ 0.59
CCNFP41002 FAM99A-201ENST00000382167 1432 ntTSL 1 (best) BASIC18.75■□□□□ 0.59
CCNFP41002 SEPT8-201ENST00000296873 4394 ntAPPRIS P2 TSL 1 (best) BASIC18.75■□□□□ 0.59
CCNFP41002 LTBP4-201ENST00000204005 5032 ntAPPRIS ALT2 TSL 1 (best) BASIC18.75■□□□□ 0.59
CCNFP41002 MACROD2-201ENST00000217246 4994 ntAPPRIS P1 TSL 2 BASIC18.75■□□□□ 0.59
CCNFP41002 GOLGA3-203ENST00000456883 5496 ntAPPRIS ALT2 TSL 1 (best) BASIC18.75■□□□□ 0.59
CCNFP41002 ARPC4-201ENST00000397261 2582 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
CCNFP41002 PMAIP1-202ENST00000316660 1948 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
CCNFP41002 TMEM223-201ENST00000307366 1288 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
CCNFP41002 DCLK1-203ENST00000379892 2101 ntTSL 5 BASIC18.75■□□□□ 0.59
CCNFP41002 RAMP1-204ENST00000409726 734 ntTSL 3 BASIC18.75■□□□□ 0.59
CCNFP41002 CXCL2-202ENST00000508487 1218 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
CCNFP41002 ALKAL1-202ENST00000523939 536 ntAPPRIS ALT2 TSL 1 (best) BASIC18.75■□□□□ 0.59
CCNFP41002 TRA2A-211ENST00000538367 2142 ntAPPRIS ALT2 TSL 2 BASIC18.75■□□□□ 0.59
CCNFP41002 KDM2B-217ENST00000543852 1188 ntTSL 5 BASIC18.75■□□□□ 0.59
CCNFP41002 AC044860.1-201ENST00000560756 1160 ntTSL 1 (best) BASIC18.75■□□□□ 0.59
CCNFP41002 RPRM-201ENST00000325926 1471 ntAPPRIS P1 BASIC18.75■□□□□ 0.59
CCNFP41002 UBE2E3-209ENST00000602710 1556 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
CCNFP41002 CDK10-202ENST00000353379 1798 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
CCNFP41002 ASZ1-201ENST00000284629 1865 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
CCNFP41002 LURAP1-201ENST00000371980 1854 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
CCNFP41002 AL499627.1-201ENST00000569373 2188 ntBASIC18.75■□□□□ 0.59
CCNFP41002 ENTPD6-209ENST00000433259 2654 ntTSL 5 BASIC18.75■□□□□ 0.59
CCNFP41002 ANKRD13B-209ENST00000614878 2670 ntAPPRIS P1 TSL 5 BASIC18.75■□□□□ 0.59
CCNFP41002 RIMKLB-202ENST00000357529 5830 ntAPPRIS P1 TSL 5 BASIC18.75■□□□□ 0.59
CCNFP41002 SRI-203ENST00000419179 1307 ntTSL 2 BASIC18.74■□□□□ 0.59
Retrieved 100 of 98,524 protein–RNA pairs in 54.4 ms