Protein–RNA interactions for Protein: P31273

HOXC8, Homeobox protein Hox-C8, humanhuman

Predictions only

Length 242 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HOXC8P31273 FICD-205ENST00000552758 603 ntTSL 2 BASIC20.35■□□□□ 0.85
HOXC8P31273 SPINT1-AS1-202ENST00000564302 643 ntTSL 2 BASIC20.35■□□□□ 0.85
HOXC8P31273 C19orf25-204ENST00000586564 1265 ntAPPRIS P1 TSL 3 BASIC20.35■□□□□ 0.85
HOXC8P31273 AC104971.2-201ENST00000588144 1209 ntTSL 2 BASIC20.35■□□□□ 0.85
HOXC8P31273 AC011511.2-201ENST00000592893 918 ntTSL 3 BASIC20.35■□□□□ 0.85
HOXC8P31273 PLAUR-214ENST00000601723 1205 ntTSL 1 (best) BASIC20.35■□□□□ 0.85
HOXC8P31273 AC124864.1-201ENST00000623408 392 ntBASIC20.35■□□□□ 0.85
HOXC8P31273 AC083906.6-201ENST00000641366 219 ntBASIC20.35■□□□□ 0.85
HOXC8P31273 CD72-201ENST00000259633 1548 ntAPPRIS P2 TSL 1 (best) BASIC20.35■□□□□ 0.85
HOXC8P31273 MTSS1-203ENST00000431961 1711 ntTSL 1 (best) BASIC20.35■□□□□ 0.85
HOXC8P31273 ARFGAP3-201ENST00000263245 2857 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
HOXC8P31273 PRRT4-207ENST00000535159 2897 ntAPPRIS P1 TSL 5 BASIC20.35■□□□□ 0.85
HOXC8P31273 ADM-207ENST00000530439 1839 ntTSL 2 BASIC20.34■□□□□ 0.85
HOXC8P31273 NHLRC1-201ENST00000340650 2248 ntAPPRIS P1 BASIC20.34■□□□□ 0.85
HOXC8P31273 ANTXR1-203ENST00000409829 2221 ntTSL 1 (best) BASIC20.34■□□□□ 0.85
HOXC8P31273 TMEM106C-202ENST00000429772 1515 ntAPPRIS P1 TSL 2 BASIC20.34■□□□□ 0.85
HOXC8P31273 TINAGL1-201ENST00000271064 2187 ntAPPRIS P3 TSL 1 (best) BASIC20.34■□□□□ 0.85
HOXC8P31273 CLN3-204ENST00000357857 1720 ntTSL 2 BASIC20.34■□□□□ 0.85
HOXC8P31273 ATP5J-201ENST00000284971 614 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
HOXC8P31273 SPIN2B-202ENST00000333933 1258 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
HOXC8P31273 NPFFR2-202ENST00000344413 1234 ntTSL 1 (best) BASIC20.34■□□□□ 0.85
HOXC8P31273 Metazoa_SRP.28-201ENST00000366402 260 ntBASIC20.34■□□□□ 0.85
HOXC8P31273 DMKN-215ENST00000451297 1111 ntAPPRIS ALT2 TSL 1 (best) BASIC20.34■□□□□ 0.85
HOXC8P31273 ABR-204ENST00000543210 1049 ntTSL 2 BASIC20.34■□□□□ 0.85
HOXC8P31273 FAM220A-205ENST00000578372 207 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
HOXC8P31273 GXYLT1P4-201ENST00000613576 1192 ntBASIC20.34■□□□□ 0.85
HOXC8P31273 AC016757.1-205ENST00000470346 1888 ntTSL 2 BASIC20.34■□□□□ 0.85
HOXC8P31273 ABCC6-209ENST00000640696 1893 ntTSL 5 BASIC20.34■□□□□ 0.85
HOXC8P31273 CFC1-203ENST00000621673 1444 ntTSL 2 BASIC20.34■□□□□ 0.85
HOXC8P31273 RUVBL2-206ENST00000595090 2009 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
HOXC8P31273 FAM53A-202ENST00000461064 2159 ntAPPRIS P1 TSL 2 BASIC20.34■□□□□ 0.85
HOXC8P31273 SCUBE1-201ENST00000290460 2258 ntTSL 1 (best) BASIC20.33■□□□□ 0.85
HOXC8P31273 AC009133.6-201ENST00000609618 2252 ntAPPRIS P1 TSL 5 BASIC20.33■□□□□ 0.85
HOXC8P31273 NFIL3-201ENST00000297689 2085 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.85
HOXC8P31273 AC087482.1-204ENST00000636067 2431 ntTSL 5 BASIC20.33■□□□□ 0.85
HOXC8P31273 DISP3-202ENST00000304391 1495 ntTSL 1 (best) BASIC20.33■□□□□ 0.85
HOXC8P31273 IFNLR1-205ENST00000374421 1476 ntAPPRIS ALT2 TSL 1 (best) BASIC20.33■□□□□ 0.85
HOXC8P31273 CACNA1H-202ENST00000358590 8069 ntAPPRIS ALT2 TSL 5 BASIC20.33■□□□□ 0.85
HOXC8P31273 BOLA1-201ENST00000369150 811 ntAPPRIS P1 TSL 3 BASIC20.33■□□□□ 0.85
HOXC8P31273 SDR39U1-201ENST00000399395 1233 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.85
HOXC8P31273 AP003555.3-201ENST00000534086 432 ntTSL 4 BASIC20.33■□□□□ 0.85
HOXC8P31273 AC007220.1-201ENST00000572466 1055 ntTSL 3 BASIC20.33■□□□□ 0.85
HOXC8P31273 AC020909.1-201ENST00000599632 1265 ntAPPRIS P1 TSL 5 BASIC20.33■□□□□ 0.85
HOXC8P31273 AC138894.3-201ENST00000603787 634 ntBASIC20.33■□□□□ 0.85
HOXC8P31273 CCNC-219ENST00000627680 896 ntTSL 5 BASIC20.33■□□□□ 0.85
HOXC8P31273 EPS8L1-201ENST00000201647 2536 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.84
HOXC8P31273 LAG3-201ENST00000203629 1974 ntAPPRIS P2 TSL 1 (best) BASIC20.33■□□□□ 0.84
HOXC8P31273 P2RY6-201ENST00000349767 1700 ntAPPRIS P1 TSL 2 BASIC20.33■□□□□ 0.84
HOXC8P31273 CDK2AP2-201ENST00000301488 1378 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.84
HOXC8P31273 NSUN5P1-202ENST00000421140 1535 ntBASIC20.32■□□□□ 0.84
HOXC8P31273 NSUN5P2-203ENST00000457352 1529 ntBASIC20.32■□□□□ 0.84
HOXC8P31273 SORBS3-221ENST00000523965 2028 ntTSL 1 (best) BASIC20.32■□□□□ 0.84
HOXC8P31273 LRRC61-201ENST00000323078 1684 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
HOXC8P31273 TSNAXIP1-202ENST00000415766 2338 ntAPPRIS ALT2 TSL 2 BASIC20.32■□□□□ 0.84
HOXC8P31273 BBC3-201ENST00000300880 1347 ntTSL 1 (best) BASIC20.32■□□□□ 0.84
HOXC8P31273 PDLIM2-206ENST00000409141 1463 ntTSL 2 BASIC20.32■□□□□ 0.84
HOXC8P31273 MATN4-202ENST00000360607 2127 ntTSL 1 (best) BASIC20.32■□□□□ 0.84
HOXC8P31273 SEMA6C-210ENST00000621728 1918 ntTSL 1 (best) BASIC20.32■□□□□ 0.84
HOXC8P31273 CAPZB-202ENST00000264203 2068 ntTSL 2 BASIC20.32■□□□□ 0.84
HOXC8P31273 AKR1C7P-201ENST00000305623 895 ntBASIC20.32■□□□□ 0.84
HOXC8P31273 TPM1-203ENST00000317516 738 ntTSL 1 (best) BASIC20.32■□□□□ 0.84
HOXC8P31273 CMTM1-204ENST00000336328 606 ntAPPRIS ALT2 TSL 1 (best) BASIC20.32■□□□□ 0.84
HOXC8P31273 CKLF-202ENST00000345436 571 ntAPPRIS ALT2 TSL 1 (best) BASIC20.32■□□□□ 0.84
HOXC8P31273 MAL-203ENST00000353004 873 ntTSL 1 (best) BASIC20.32■□□□□ 0.84
HOXC8P31273 BEX4-201ENST00000372691 1066 ntAPPRIS P1 TSL 2 BASIC20.32■□□□□ 0.84
HOXC8P31273 ROMO1-204ENST00000374078 498 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
HOXC8P31273 AP000347.1-202ENST00000435868 847 ntBASIC20.32■□□□□ 0.84
HOXC8P31273 LEF1-AS1-201ENST00000436413 1045 ntTSL 1 (best) BASIC20.32■□□□□ 0.84
HOXC8P31273 KRT16P4-201ENST00000453883 522 ntBASIC20.32■□□□□ 0.84
HOXC8P31273 NOP16-205ENST00000509257 1000 ntTSL 2 BASIC20.32■□□□□ 0.84
HOXC8P31273 CMTM1-213ENST00000529506 581 ntAPPRIS ALT2 TSL 1 (best) BASIC20.32■□□□□ 0.84
HOXC8P31273 AP002469.2-201ENST00000531724 424 ntBASIC20.32■□□□□ 0.84
HOXC8P31273 TPM1-218ENST00000559281 851 ntTSL 5 BASIC20.32■□□□□ 0.84
HOXC8P31273 LAT-211ENST00000566177 786 ntAPPRIS ALT2 TSL 1 (best) BASIC20.32■□□□□ 0.84
HOXC8P31273 AC003688.1-201ENST00000577138 489 ntAPPRIS P1 TSL 3 BASIC20.32■□□□□ 0.84
HOXC8P31273 AC099336.1-202ENST00000602961 463 ntBASIC20.32■□□□□ 0.84
HOXC8P31273 HSP90B1-211ENST00000640977 1127 ntTSL 5 BASIC20.32■□□□□ 0.84
HOXC8P31273 TNFAIP3-207ENST00000614035 1430 ntTSL 5 BASIC20.32■□□□□ 0.84
HOXC8P31273 DLK2-203ENST00000372488 1590 ntAPPRIS P3 TSL 1 (best) BASIC20.32■□□□□ 0.84
HOXC8P31273 MICA-209ENST00000449934 1386 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
HOXC8P31273 SEPT9-211ENST00000585930 1387 ntTSL 2 BASIC20.32■□□□□ 0.84
HOXC8P31273 CELF6-204ENST00000543764 1676 ntTSL 2 BASIC20.32■□□□□ 0.84
HOXC8P31273 UBR2-203ENST00000372903 2423 ntTSL 1 (best) BASIC20.32■□□□□ 0.84
HOXC8P31273 OPN3-201ENST00000366554 2620 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
HOXC8P31273 GUCA1A-201ENST00000053469 1874 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
HOXC8P31273 MAGEA6-201ENST00000329342 1740 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
HOXC8P31273 MAGEA3-201ENST00000370278 1724 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
HOXC8P31273 TMEM259-202ENST00000356663 2748 ntAPPRIS ALT2 TSL 1 (best) BASIC20.31■□□□□ 0.84
HOXC8P31273 RIPK2-201ENST00000220751 2584 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
HOXC8P31273 RELB-201ENST00000221452 2294 ntAPPRIS P2 TSL 1 (best) BASIC20.31■□□□□ 0.84
HOXC8P31273 TNNC1-201ENST00000232975 714 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
HOXC8P31273 PRMT2-201ENST00000291705 1011 ntTSL 1 (best) BASIC20.31■□□□□ 0.84
HOXC8P31273 STX8-201ENST00000306357 1246 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
HOXC8P31273 S100A3-201ENST00000368712 579 ntAPPRIS P1 TSL 3 BASIC20.31■□□□□ 0.84
HOXC8P31273 PHPT1-202ENST00000371661 985 ntTSL 5 BASIC20.31■□□□□ 0.84
HOXC8P31273 EEF1E1-202ENST00000429723 562 ntTSL 3 BASIC20.31■□□□□ 0.84
HOXC8P31273 AC113404.2-201ENST00000507884 177 ntBASIC20.31■□□□□ 0.84
HOXC8P31273 SLC25A6P4-201ENST00000586535 553 ntBASIC20.31■□□□□ 0.84
HOXC8P31273 IGHV3OR16-7-201ENST00000604106 360 ntBASIC20.31■□□□□ 0.84
HOXC8P31273 AC004263.2-201ENST00000617183 678 ntBASIC20.31■□□□□ 0.84
Retrieved 100 of 98,524 protein–RNA pairs in 23.4 ms