Protein–RNA interactions for Protein: P20337

RAB3B, Ras-related protein Rab-3B, humanhuman

Predictions only

Length 219 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RAB3BP20337 SLC47A2-202ENST00000350657 2285 ntAPPRIS ALT2 TSL 1 (best) BASIC16.35■□□□□ 0.21
RAB3BP20337 MYH14-203ENST00000425460 6811 ntAPPRIS P3 TSL 5 BASIC16.35■□□□□ 0.21
RAB3BP20337 RAB28-201ENST00000288723 1810 ntAPPRIS P3 TSL 1 (best) BASIC16.35■□□□□ 0.21
RAB3BP20337 BABAM1-213ENST00000601043 1366 ntAPPRIS P3 TSL 2 BASIC16.35■□□□□ 0.21
RAB3BP20337 RASSF5-205ENST00000581503 5586 ntTSL 1 (best) BASIC16.35■□□□□ 0.21
RAB3BP20337 TCP11-204ENST00000373979 1882 ntAPPRIS P3 TSL 5 BASIC16.35■□□□□ 0.21
RAB3BP20337 ABHD1-201ENST00000316470 1400 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
RAB3BP20337 FCMR-202ENST00000442471 1441 ntTSL 2 BASIC16.35■□□□□ 0.21
RAB3BP20337 MCM9-201ENST00000316068 2442 ntTSL 1 (best) BASIC16.35■□□□□ 0.21
RAB3BP20337 AGER-207ENST00000375076 1492 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
RAB3BP20337 CAMKMT-201ENST00000378494 1495 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
RAB3BP20337 INPP5J-207ENST00000405300 2515 ntTSL 1 (best) BASIC16.35■□□□□ 0.21
RAB3BP20337 HEXIM2-201ENST00000307275 1528 ntAPPRIS P1 TSL 2 BASIC16.35■□□□□ 0.21
RAB3BP20337 MTMR9LP-203ENST00000426597 1545 ntBASIC16.35■□□□□ 0.21
RAB3BP20337 KXD1-203ENST00000540691 1592 ntAPPRIS P1 TSL 3 BASIC16.34■□□□□ 0.21
RAB3BP20337 BECN1-201ENST00000361523 2112 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
RAB3BP20337 RUVBL1-202ENST00000464873 2126 ntTSL 2 BASIC16.34■□□□□ 0.21
RAB3BP20337 TMEM45B-201ENST00000281441 2234 ntAPPRIS P1 TSL 2 BASIC16.34■□□□□ 0.21
RAB3BP20337 KCNA2-201ENST00000316361 2827 ntAPPRIS P1 TSL 2 BASIC16.34■□□□□ 0.21
RAB3BP20337 CDH24-204ENST00000487137 3438 ntAPPRIS P1 TSL 5 BASIC16.34■□□□□ 0.21
RAB3BP20337 EPB41L5-203ENST00000443124 2872 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
RAB3BP20337 TBC1D4-202ENST00000377636 6364 ntAPPRIS P3 TSL 2 BASIC16.34■□□□□ 0.21
RAB3BP20337 MPV17L-201ENST00000287594 5820 ntTSL 1 (best) BASIC16.34■□□□□ 0.21
RAB3BP20337 ACOXL-205ENST00000439055 2373 ntTSL 2 BASIC16.34■□□□□ 0.21
RAB3BP20337 ZSWIM8-223ENST00000605216 6004 ntAPPRIS P2 TSL 1 (best) BASIC16.34■□□□□ 0.21
RAB3BP20337 CEP83-AS1-201ENST00000623122 2482 ntBASIC16.34■□□□□ 0.21
RAB3BP20337 FAIM-202ENST00000360570 1157 ntAPPRIS ALT1 TSL 3 BASIC16.34■□□□□ 0.21
RAB3BP20337 HSD17B10-202ENST00000375298 823 ntTSL 3 BASIC16.34■□□□□ 0.21
RAB3BP20337 N4BP2L1-203ENST00000380133 903 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
RAB3BP20337 CKLF-CMTM1-204ENST00000532838 587 ntAPPRIS ALT2 TSL 4 BASIC16.34■□□□□ 0.21
RAB3BP20337 AC009065.4-203ENST00000562838 535 ntTSL 2 BASIC16.34■□□□□ 0.21
RAB3BP20337 SLC35A2-212ENST00000634665 486 ntTSL 4 BASIC16.34■□□□□ 0.21
RAB3BP20337 HSD17B12-213ENST00000637401 866 ntTSL 4 BASIC16.34■□□□□ 0.21
RAB3BP20337 PRKAR1B-204ENST00000406797 2553 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
RAB3BP20337 PTEN-201ENST00000371953 9027 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
RAB3BP20337 STRN4-201ENST00000263280 3210 ntAPPRIS P3 TSL 1 (best) BASIC16.34■□□□□ 0.21
RAB3BP20337 FNBP1-201ENST00000355681 1977 ntTSL 2 BASIC16.34■□□□□ 0.21
RAB3BP20337 PRSS23-209ENST00000533902 2043 ntTSL 4 BASIC16.34■□□□□ 0.21
RAB3BP20337 HNRNPLL-202ENST00000358367 2779 ntTSL 5 BASIC16.34■□□□□ 0.21
RAB3BP20337 FAM208A-209ENST00000493960 5600 ntAPPRIS P2 TSL 5 BASIC16.34■□□□□ 0.21
RAB3BP20337 GNE-204ENST00000539208 2190 ntTSL 2 BASIC16.34■□□□□ 0.21
RAB3BP20337 WIF1-201ENST00000286574 2238 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
RAB3BP20337 ACAA1-201ENST00000301810 1540 ntTSL 1 (best) BASIC16.34■□□□□ 0.21
RAB3BP20337 MFSD10-205ENST00000507555 1573 ntTSL 5 BASIC16.34■□□□□ 0.21
RAB3BP20337 RCC2P6-201ENST00000526625 1557 ntBASIC16.34■□□□□ 0.21
RAB3BP20337 NFYC-AS1-201ENST00000606277 1687 ntBASIC16.34■□□□□ 0.21
RAB3BP20337 STRA6-209ENST00000563965 2565 ntTSL 1 (best) BASIC16.33■□□□□ 0.21
RAB3BP20337 PSRC1-201ENST00000369903 1710 ntAPPRIS P3 TSL 5 BASIC16.33■□□□□ 0.21
RAB3BP20337 PSRC1-206ENST00000409267 1730 ntAPPRIS P3 TSL 5 BASIC16.33■□□□□ 0.21
RAB3BP20337 MAP7-209ENST00000618822 4497 ntAPPRIS ALT2 TSL 5 BASIC16.33■□□□□ 0.21
RAB3BP20337 SBF2-AS1-201ENST00000498905 2709 ntTSL 5 BASIC16.33■□□□□ 0.21
RAB3BP20337 PALM-201ENST00000264560 2755 ntAPPRIS ALT2 TSL 4 BASIC16.33■□□□□ 0.21
RAB3BP20337 ESYT2-206ENST00000613624 2766 ntAPPRIS ALT2 TSL 2 BASIC16.33■□□□□ 0.21
RAB3BP20337 FLYWCH1P1-201ENST00000460917 1874 ntBASIC16.33■□□□□ 0.21
RAB3BP20337 NECTIN3-211ENST00000493615 1876 ntAPPRIS ALT2 TSL 2 BASIC16.33■□□□□ 0.21
RAB3BP20337 AC093677.2-201ENST00000600169 1863 ntBASIC16.33■□□□□ 0.21
RAB3BP20337 ZNF512B-201ENST00000369888 5919 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
RAB3BP20337 GNA13-201ENST00000439174 4922 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
RAB3BP20337 MOB2-201ENST00000329957 1207 ntAPPRIS P1 TSL 2 BASIC16.33■□□□□ 0.2
RAB3BP20337 SOCS1-201ENST00000332029 1225 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
RAB3BP20337 P2RX2-202ENST00000348800 1222 ntAPPRIS ALT2 TSL 1 (best) BASIC16.33■□□□□ 0.2
RAB3BP20337 RASGRP2-209ENST00000394429 453 ntTSL 3 BASIC16.33■□□□□ 0.2
RAB3BP20337 NOXO1-203ENST00000397280 1147 ntAPPRIS ALT2 TSL 1 (best) BASIC16.33■□□□□ 0.2
RAB3BP20337 KRTAP5-8-201ENST00000398534 1183 ntAPPRIS P1 BASIC16.33■□□□□ 0.2
RAB3BP20337 C19orf73-201ENST00000408991 744 ntAPPRIS P1 BASIC16.33■□□□□ 0.2
RAB3BP20337 AC012146.1-202ENST00000413077 474 ntTSL 2 BASIC16.33■□□□□ 0.2
RAB3BP20337 CSF1-205ENST00000420111 1083 ntTSL 5 BASIC16.33■□□□□ 0.2
RAB3BP20337 NME6-213ENST00000451657 871 ntTSL 2 BASIC16.33■□□□□ 0.2
RAB3BP20337 MIR1302-2HG-202ENST00000473358 712 ntTSL 5 BASIC16.33■□□□□ 0.2
RAB3BP20337 SEC11A-208ENST00000559729 1256 ntTSL 2 BASIC16.33■□□□□ 0.2
RAB3BP20337 AC140725.1-202ENST00000561145 712 ntTSL 5 BASIC16.33■□□□□ 0.2
RAB3BP20337 NOXO1-205ENST00000566005 1144 ntTSL 1 (best) BASIC16.33■□□□□ 0.2
RAB3BP20337 AL772284.2-201ENST00000620151 1147 ntAPPRIS P1 TSL 5 BASIC16.33■□□□□ 0.2
RAB3BP20337 NUDT19-201ENST00000397061 2967 ntAPPRIS P1 TSL 2 BASIC16.33■□□□□ 0.2
RAB3BP20337 RFC2-202ENST00000352131 1576 ntTSL 1 (best) BASIC16.33■□□□□ 0.2
RAB3BP20337 ATXN2-201ENST00000377617 4702 ntAPPRIS P3 TSL 1 (best) BASIC16.33■□□□□ 0.2
RAB3BP20337 INPP4A-204ENST00000409540 3231 ntTSL 1 (best) BASIC16.33■□□□□ 0.2
RAB3BP20337 CYP2D7-203ENST00000433992 1740 ntTSL 1 (best) BASIC16.33■□□□□ 0.2
RAB3BP20337 AC087500.1-202ENST00000571689 1715 ntTSL 1 (best) BASIC16.33■□□□□ 0.2
RAB3BP20337 C17orf62-202ENST00000342572 1849 ntTSL 2 BASIC16.33■□□□□ 0.2
RAB3BP20337 PLEKHM2-201ENST00000375793 4004 ntAPPRIS ALT2 TSL 5 BASIC16.33■□□□□ 0.2
RAB3BP20337 SLC27A2-202ENST00000380902 2181 ntTSL 1 (best) BASIC16.33■□□□□ 0.2
RAB3BP20337 AP001476.1-201ENST00000451618 2198 ntTSL 2 BASIC16.33■□□□□ 0.2
RAB3BP20337 PPP1R16A-202ENST00000435887 2273 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
RAB3BP20337 MYZAP-201ENST00000267853 2361 ntAPPRIS P3 TSL 1 (best) BASIC16.33■□□□□ 0.2
RAB3BP20337 ZBTB7C-201ENST00000535628 4818 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
RAB3BP20337 PIF1-201ENST00000268043 2687 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
RAB3BP20337 ENC1-205ENST00000510316 5381 ntTSL 2 BASIC16.32■□□□□ 0.2
RAB3BP20337 SETD3-202ENST00000331768 2878 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
RAB3BP20337 SQSTM1-202ENST00000389805 2986 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
RAB3BP20337 HCN1-201ENST00000303230 9885 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
RAB3BP20337 CDC25A-201ENST00000302506 3783 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
RAB3BP20337 MAP3K6-201ENST00000357582 4136 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
RAB3BP20337 UBE2Q2-201ENST00000267938 3130 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
RAB3BP20337 ARHGAP27-201ENST00000290470 1376 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
RAB3BP20337 SAAL1-201ENST00000300013 1518 ntAPPRIS ALT1 TSL 2 BASIC16.32■□□□□ 0.2
RAB3BP20337 LINC00471-201ENST00000313064 1282 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
RAB3BP20337 DKK3-201ENST00000326932 2636 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
RAB3BP20337 SPPL2C-201ENST00000329196 2238 ntAPPRIS P1 BASIC16.32■□□□□ 0.2
RAB3BP20337 ZNF274-202ENST00000345813 2678 ntAPPRIS ALT2 TSL 1 (best) BASIC16.32■□□□□ 0.2
Retrieved 100 of 98,524 protein–RNA pairs in 46.7 ms