Protein–RNA interactions for Protein: P0CG48

UBC, Polyubiquitin-C, humanhuman

Known RBP Predictions only

Length 685 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UBCP0CG48 PLBD2-201ENST00000280800 4800 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
UBCP0CG48 EMC8-201ENST00000253457 1962 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
UBCP0CG48 MRPL4-202ENST00000307422 1320 ntAPPRIS P2 TSL 5 BASIC16.38■□□□□ 0.21
UBCP0CG48 MAP6-201ENST00000304771 3334 ntAPPRIS P3 TSL 1 (best) BASIC16.38■□□□□ 0.21
UBCP0CG48 KCNIP4-205ENST00000382152 1767 ntTSL 5 BASIC16.38■□□□□ 0.21
UBCP0CG48 PRKCB-202ENST00000321728 2689 ntAPPRIS ALT1 TSL 1 (best) BASIC16.38■□□□□ 0.21
UBCP0CG48 DAG1-222ENST00000545947 5829 ntAPPRIS P1 TSL 5 BASIC16.38■□□□□ 0.21
UBCP0CG48 HOXC11-201ENST00000243082 2039 ntTSL 3 BASIC16.38■□□□□ 0.21
UBCP0CG48 AP5S1-203ENST00000379573 1848 ntTSL 1 (best) BASIC16.38■□□□□ 0.21
UBCP0CG48 ZNF274-203ENST00000424679 2539 ntTSL 1 (best) BASIC16.38■□□□□ 0.21
UBCP0CG48 SALRNA1-201ENST00000555871 2086 ntTSL 4 BASIC16.38■□□□□ 0.21
UBCP0CG48 KCNQ2-205ENST00000360480 2775 ntAPPRIS ALT2 TSL 5 BASIC16.38■□□□□ 0.21
UBCP0CG48 FAM53A-207ENST00000489363 2776 ntTSL 2 BASIC16.38■□□□□ 0.21
UBCP0CG48 WWP1-202ENST00000517970 4686 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
UBCP0CG48 KRT8P11-201ENST00000409686 1436 ntBASIC16.37■□□□□ 0.21
UBCP0CG48 MEF2B-204ENST00000424583 1405 ntAPPRIS P1 TSL 5 BASIC16.37■□□□□ 0.21
UBCP0CG48 BMP2K-208ENST00000628286 3848 ntAPPRIS ALT2 TSL 5 BASIC16.37■□□□□ 0.21
UBCP0CG48 AP2M1-201ENST00000292807 1931 ntAPPRIS P4 TSL 5 BASIC16.37■□□□□ 0.21
UBCP0CG48 FAM131A-202ENST00000340957 2421 ntTSL 1 (best) BASIC16.37■□□□□ 0.21
UBCP0CG48 AMDHD2-201ENST00000293971 1459 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
UBCP0CG48 SEMA3C-201ENST00000265361 5174 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
UBCP0CG48 GLYCTK-202ENST00000436784 1982 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
UBCP0CG48 TBX18-202ENST00000369663 6245 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
UBCP0CG48 ZNF74-201ENST00000357502 2788 ntTSL 1 (best) BASIC16.37■□□□□ 0.21
UBCP0CG48 COX7A2L-201ENST00000234301 1112 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
UBCP0CG48 KRTCAP3-201ENST00000288873 872 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
UBCP0CG48 FAM86C1-203ENST00000426628 952 ntAPPRIS ALT2 TSL 2 BASIC16.37■□□□□ 0.21
UBCP0CG48 ROPN1L-202ENST00000503804 1291 ntAPPRIS P1 TSL 2 BASIC16.37■□□□□ 0.21
UBCP0CG48 AMN1-211ENST00000541931 880 ntTSL 1 (best) BASIC16.37■□□□□ 0.21
UBCP0CG48 MIR381HG-201ENST00000553692 425 ntTSL 3 BASIC16.37■□□□□ 0.21
UBCP0CG48 L34079.3-201ENST00000600242 546 ntTSL 4 BASIC16.37■□□□□ 0.21
UBCP0CG48 AC018445.1-201ENST00000621571 568 ntTSL 4 BASIC16.37■□□□□ 0.21
UBCP0CG48 AL023875.1-201ENST00000640777 796 ntBASIC16.37■□□□□ 0.21
UBCP0CG48 C8orf58-207ENST00000615223 1848 ntAPPRIS ALT2 TSL 5 BASIC16.37■□□□□ 0.21
UBCP0CG48 ENC1-201ENST00000302351 5520 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
UBCP0CG48 PCDH7-206ENST00000543491 4457 ntAPPRIS ALT2 BASIC16.37■□□□□ 0.21
UBCP0CG48 GPATCH3-201ENST00000361720 2123 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
UBCP0CG48 ATXN2-227ENST00000616825 4575 ntAPPRIS ALT2 TSL 5 BASIC16.37■□□□□ 0.21
UBCP0CG48 PTTG1IP-201ENST00000330938 2760 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
UBCP0CG48 SEMA3B-209ENST00000456560 2221 ntTSL 1 (best) BASIC16.37■□□□□ 0.21
UBCP0CG48 NFYC-AS1-201ENST00000606277 1687 ntBASIC16.37■□□□□ 0.21
UBCP0CG48 CROCC2-201ENST00000443866 5382 ntAPPRIS P1 TSL 5 BASIC16.37■□□□□ 0.21
UBCP0CG48 ASB18-201ENST00000409749 1401 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
UBCP0CG48 HOXC13-AS-201ENST00000512916 1408 ntTSL 3 BASIC16.36■□□□□ 0.21
UBCP0CG48 KRT8P3-201ENST00000519669 1449 ntBASIC16.36■□□□□ 0.21
UBCP0CG48 CYP2D7-203ENST00000433992 1740 ntTSL 1 (best) BASIC16.36■□□□□ 0.21
UBCP0CG48 ISM2-207ENST00000493585 1739 ntTSL 1 (best) BASIC16.36■□□□□ 0.21
UBCP0CG48 CYP2D7-207ENST00000612115 1734 ntAPPRIS P1 TSL 5 BASIC16.36■□□□□ 0.21
UBCP0CG48 POM121C-208ENST00000615331 5835 ntAPPRIS P2 TSL 1 (best) BASIC16.36■□□□□ 0.21
UBCP0CG48 KRT8P32-201ENST00000512863 1461 ntBASIC16.36■□□□□ 0.21
UBCP0CG48 KRT13-208ENST00000587544 1456 ntAPPRIS ALT2 TSL 1 (best) BASIC16.36■□□□□ 0.21
UBCP0CG48 HOXB8-201ENST00000239144 1823 ntAPPRIS P2 TSL 2 BASIC16.36■□□□□ 0.21
UBCP0CG48 TBXAS1-204ENST00000416849 2505 ntTSL 5 BASIC16.36■□□□□ 0.21
UBCP0CG48 CCT7-202ENST00000398422 1234 ntTSL 2 BASIC16.36■□□□□ 0.21
UBCP0CG48 AC090192.1-201ENST00000517740 490 ntBASIC16.36■□□□□ 0.21
UBCP0CG48 SCARA5-203ENST00000518030 1074 ntTSL 1 (best) BASIC16.36■□□□□ 0.21
UBCP0CG48 ATP6V0E1-204ENST00000519911 718 ntTSL 2 BASIC16.36■□□□□ 0.21
UBCP0CG48 BCL2L10-202ENST00000561198 825 ntAPPRIS ALT2 TSL 1 (best) BASIC16.36■□□□□ 0.21
UBCP0CG48 AC006504.5-207ENST00000586220 487 ntTSL 2 BASIC16.36■□□□□ 0.21
UBCP0CG48 TMEM191B-203ENST00000613597 366 ntAPPRIS ALT2 TSL 5 BASIC16.36■□□□□ 0.21
UBCP0CG48 ELAC2-202ENST00000395962 2924 ntTSL 2 BASIC16.36■□□□□ 0.21
UBCP0CG48 TXNRD3-203ENST00000524230 2950 ntAPPRIS ALT2 TSL 1 (best) BASIC16.36■□□□□ 0.21
UBCP0CG48 HNF1A-202ENST00000400024 2337 ntTSL 2 BASIC16.36■□□□□ 0.21
UBCP0CG48 TCTN1-225ENST00000551590 2309 ntAPPRIS ALT2 TSL 1 (best) BASIC16.36■□□□□ 0.21
UBCP0CG48 RAP1GAP-204ENST00000374761 3318 ntTSL 5 BASIC16.36■□□□□ 0.21
UBCP0CG48 TRIM41-202ENST00000351937 2696 ntTSL 1 (best) BASIC16.36■□□□□ 0.21
UBCP0CG48 AP003071.5-201ENST00000641568 2695 ntAPPRIS P1 BASIC16.36■□□□□ 0.21
UBCP0CG48 PNKP-207ENST00000596014 1665 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
UBCP0CG48 LINC00466-207ENST00000634725 1736 ntTSL 5 BASIC16.36■□□□□ 0.21
UBCP0CG48 PCSK5-202ENST00000376767 2845 ntTSL 2 BASIC16.36■□□□□ 0.21
UBCP0CG48 SPNS3-201ENST00000355530 2133 ntAPPRIS P1 TSL 2 BASIC16.36■□□□□ 0.21
UBCP0CG48 CPEB3-203ENST00000614585 5789 ntAPPRIS P3 TSL 5 BASIC16.36■□□□□ 0.21
UBCP0CG48 ANKRD18DP-201ENST00000335478 2171 ntTSL 2 BASIC16.36■□□□□ 0.21
UBCP0CG48 STOML1-209ENST00000564777 1849 ntTSL 1 (best) BASIC16.35■□□□□ 0.21
UBCP0CG48 SLC25A48-201ENST00000274513 1880 ntTSL 2 BASIC16.35■□□□□ 0.21
UBCP0CG48 SRMS-201ENST00000217188 1516 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
UBCP0CG48 PLAUR-203ENST00000340093 1548 ntAPPRIS P3 TSL 1 (best) BASIC16.35■□□□□ 0.21
UBCP0CG48 IFFO1-204ENST00000396840 2677 ntAPPRIS ALT1 TSL 5 BASIC16.35■□□□□ 0.21
UBCP0CG48 BCR-201ENST00000305877 7082 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
UBCP0CG48 TRIM61-201ENST00000329314 1582 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
UBCP0CG48 MFSD10-205ENST00000507555 1573 ntTSL 5 BASIC16.35■□□□□ 0.21
UBCP0CG48 KBTBD11-201ENST00000320248 6710 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
UBCP0CG48 PTPRJ-202ENST00000440289 3158 ntTSL 1 (best) BASIC16.35■□□□□ 0.21
UBCP0CG48 CCT7-215ENST00000539919 2031 ntTSL 2 BASIC16.35■□□□□ 0.21
UBCP0CG48 KCNK3-201ENST00000302909 6162 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
UBCP0CG48 MAP4K4-202ENST00000324219 7526 ntTSL 5 BASIC16.35■□□□□ 0.21
UBCP0CG48 ACTR3B-203ENST00000397282 1692 ntTSL 2 BASIC16.35■□□□□ 0.21
UBCP0CG48 FAM131A-204ENST00000418281 1664 ntTSL 5 BASIC16.35■□□□□ 0.21
UBCP0CG48 ZNF697-201ENST00000421812 5041 ntAPPRIS P1 TSL 3 BASIC16.35■□□□□ 0.21
UBCP0CG48 IL17C-201ENST00000244241 1044 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
UBCP0CG48 CMTM7-202ENST00000349718 1214 ntTSL 1 (best) BASIC16.35■□□□□ 0.21
UBCP0CG48 AIDA-202ENST00000355727 1072 ntTSL 5 BASIC16.35■□□□□ 0.21
UBCP0CG48 APTR-205ENST00000447009 902 ntTSL 2 BASIC16.35■□□□□ 0.21
UBCP0CG48 MAGI2-AS3-209ENST00000448195 774 ntTSL 3 BASIC16.35■□□□□ 0.21
UBCP0CG48 ASH1L-AS1-202ENST00000456633 911 ntTSL 2 BASIC16.35■□□□□ 0.21
UBCP0CG48 SBF2-AS1-202ENST00000499953 854 ntTSL 5 BASIC16.35■□□□□ 0.21
UBCP0CG48 AC010336.4-201ENST00000595655 438 ntTSL 5 BASIC16.35■□□□□ 0.21
UBCP0CG48 RNFT2-202ENST00000319176 2180 ntTSL 5 BASIC16.35■□□□□ 0.21
UBCP0CG48 SCOC-208ENST00000510586 2193 ntAPPRIS ALT1 TSL 5 BASIC16.35■□□□□ 0.21
UBCP0CG48 RNFT2-209ENST00000622220 2176 ntTSL 5 BASIC16.35■□□□□ 0.21
Retrieved 100 of 98,524 protein–RNA pairs in 21.2 ms