Protein–RNA interactions for Protein: O96005

CLPTM1, Cleft lip and palate transmembrane protein 1, humanhuman

Predictions only

Length 669 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLPTM1O96005 PFKL-212ENST00000628044 129 ntTSL 3 BASIC17.61■□□□□ 0.41
CLPTM1O96005 GALNT17-201ENST00000333538 3884 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
CLPTM1O96005 MMP23B-202ENST00000378675 1309 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
CLPTM1O96005 POC1B-GALNT4-201ENST00000547474 2207 ntTSL 2 BASIC17.61■□□□□ 0.41
CLPTM1O96005 FAM184A-201ENST00000338891 4141 ntAPPRIS P4 TSL 1 (best) BASIC17.61■□□□□ 0.41
CLPTM1O96005 SMCHD1-201ENST00000320876 8821 ntAPPRIS P1 TSL 5 BASIC17.61■□□□□ 0.41
CLPTM1O96005 AC005833.1-201ENST00000280684 4237 ntAPPRIS P1 BASIC17.61■□□□□ 0.41
CLPTM1O96005 FBXO18-203ENST00000397269 3640 ntTSL 5 BASIC17.61■□□□□ 0.41
CLPTM1O96005 SMUG1-202ENST00000337581 1571 ntAPPRIS P1 TSL 2 BASIC17.61■□□□□ 0.41
CLPTM1O96005 BCR-201ENST00000305877 7082 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
CLPTM1O96005 IFFO1-211ENST00000615885 2775 ntTSL 5 BASIC17.61■□□□□ 0.41
CLPTM1O96005 ZCCHC17-205ENST00000615916 1652 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
CLPTM1O96005 CD1E-205ENST00000368160 1727 ntAPPRIS ALT2 TSL 1 (best) BASIC17.61■□□□□ 0.41
CLPTM1O96005 ZFP91-201ENST00000316059 5220 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
CLPTM1O96005 EIF2B4-201ENST00000347454 1792 ntAPPRIS P3 TSL 1 (best) BASIC17.61■□□□□ 0.41
CLPTM1O96005 CDH23-205ENST00000398809 4533 ntTSL 5 BASIC17.6■□□□□ 0.41
CLPTM1O96005 SLC35B2-207ENST00000619636 2063 ntTSL 1 (best) BASIC17.6■□□□□ 0.41
CLPTM1O96005 ELP5-214ENST00000574993 2209 ntTSL 1 (best) BASIC17.6■□□□□ 0.41
CLPTM1O96005 TRABD-202ENST00000380909 2272 ntAPPRIS P3 TSL 5 BASIC17.6■□□□□ 0.41
CLPTM1O96005 RRP7BP-201ENST00000357802 2375 ntTSL 1 (best) BASIC17.6■□□□□ 0.41
CLPTM1O96005 PLEKHM2-201ENST00000375793 4004 ntAPPRIS ALT2 TSL 5 BASIC17.6■□□□□ 0.41
CLPTM1O96005 LINC00957-202ENST00000441052 2590 ntTSL 2 BASIC17.6■□□□□ 0.41
CLPTM1O96005 DHCR7-201ENST00000355527 2666 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
CLPTM1O96005 TBC1D4-202ENST00000377636 6364 ntAPPRIS P3 TSL 2 BASIC17.6■□□□□ 0.41
CLPTM1O96005 PRR29-AS1-202ENST00000580942 2926 ntTSL 2 BASIC17.6■□□□□ 0.41
CLPTM1O96005 EPM2A-201ENST00000367519 3465 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
CLPTM1O96005 VKORC1L1-201ENST00000360768 5899 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
CLPTM1O96005 TPSAB1-201ENST00000338844 1175 ntAPPRIS P2 TSL 1 (best) BASIC17.6■□□□□ 0.41
CLPTM1O96005 XXYLT1-202ENST00000356740 564 ntTSL 2 BASIC17.6■□□□□ 0.41
CLPTM1O96005 HSD17B10-202ENST00000375298 823 ntTSL 3 BASIC17.6■□□□□ 0.41
CLPTM1O96005 TPT1-AS1-210ENST00000520590 873 ntTSL 5 BASIC17.6■□□□□ 0.41
CLPTM1O96005 ISCU-212ENST00000547005 795 ntTSL 3 BASIC17.6■□□□□ 0.41
CLPTM1O96005 ANTXR1-202ENST00000409349 1384 ntTSL 1 (best) BASIC17.6■□□□□ 0.41
CLPTM1O96005 PTBP1P-201ENST00000554374 1601 ntBASIC17.6■□□□□ 0.41
CLPTM1O96005 ZNF787-202ENST00000587279 1657 ntTSL 2 BASIC17.6■□□□□ 0.41
CLPTM1O96005 AZU1-202ENST00000592205 1713 ntTSL 2 BASIC17.6■□□□□ 0.41
CLPTM1O96005 PRKAR2A-206ENST00000454963 1849 ntAPPRIS P1 TSL 2 BASIC17.6■□□□□ 0.41
CLPTM1O96005 ALAS2-203ENST00000396198 1936 ntTSL 5 BASIC17.6■□□□□ 0.41
CLPTM1O96005 ZBTB32-201ENST00000262630 1960 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
CLPTM1O96005 CLDN9-201ENST00000445369 2050 ntAPPRIS P1 BASIC17.6■□□□□ 0.41
CLPTM1O96005 CXADR-201ENST00000284878 6254 ntAPPRIS P3 TSL 1 (best) BASIC17.6■□□□□ 0.41
CLPTM1O96005 CHRD-202ENST00000348986 3155 ntAPPRIS ALT2 TSL 5 BASIC17.6■□□□□ 0.41
CLPTM1O96005 PARD3-206ENST00000374776 3389 ntTSL 1 (best) BASIC17.6■□□□□ 0.41
CLPTM1O96005 GATA6-201ENST00000269216 3770 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
CLPTM1O96005 KIF16B-201ENST00000354981 5261 ntAPPRIS P3 TSL 1 (best) BASIC17.6■□□□□ 0.41
CLPTM1O96005 MAFB-201ENST00000373313 3393 ntAPPRIS P1 BASIC17.59■□□□□ 0.41
CLPTM1O96005 RASL10B-201ENST00000603017 3205 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
CLPTM1O96005 CIZ1-226ENST00000629610 2855 ntAPPRIS ALT2 TSL 2 BASIC17.59■□□□□ 0.41
CLPTM1O96005 DKC1-201ENST00000369550 2577 ntAPPRIS P3 TSL 1 (best) BASIC17.59■□□□□ 0.41
CLPTM1O96005 NOX4-201ENST00000263317 2388 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
CLPTM1O96005 LRCH3-201ENST00000334859 2258 ntTSL 1 (best) BASIC17.59■□□□□ 0.41
CLPTM1O96005 TNIP1-211ENST00000521591 2274 ntAPPRIS P3 TSL 1 (best) BASIC17.59■□□□□ 0.41
CLPTM1O96005 NARFL-201ENST00000251588 2112 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
CLPTM1O96005 CMTM3-214ENST00000567572 1934 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
CLPTM1O96005 RAB28-201ENST00000288723 1810 ntAPPRIS P3 TSL 1 (best) BASIC17.59■□□□□ 0.41
CLPTM1O96005 GABRD-205ENST00000638771 1707 ntAPPRIS ALT2 TSL 3 BASIC17.59■□□□□ 0.41
CLPTM1O96005 CD151-201ENST00000322008 1548 ntAPPRIS P2 TSL 1 (best) BASIC17.59■□□□□ 0.41
CLPTM1O96005 ANKRD2-202ENST00000307518 1449 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
CLPTM1O96005 CENPS-CORT-204ENST00000602296 1326 ntTSL 3 BASIC17.59■□□□□ 0.41
CLPTM1O96005 UBE2C-201ENST00000243893 476 ntTSL 2 BASIC17.59■□□□□ 0.41
CLPTM1O96005 TRPT1-201ENST00000317459 962 ntAPPRIS P3 TSL 1 (best) BASIC17.59■□□□□ 0.41
CLPTM1O96005 PRSS3-202ENST00000361005 966 ntTSL 1 (best) BASIC17.59■□□□□ 0.41
CLPTM1O96005 COA6-202ENST00000366613 641 ntTSL 1 (best) BASIC17.59■□□□□ 0.41
CLPTM1O96005 SMNDC1-201ENST00000369592 1110 ntAPPRIS P1 TSL 3 BASIC17.59■□□□□ 0.41
CLPTM1O96005 UHRF2-202ENST00000381373 802 ntTSL 3 BASIC17.59■□□□□ 0.41
CLPTM1O96005 FTCDNL1-202ENST00000420128 1021 ntTSL 5 BASIC17.59■□□□□ 0.41
CLPTM1O96005 STAG3L3-201ENST00000423834 1262 ntTSL 2 BASIC17.59■□□□□ 0.41
CLPTM1O96005 AC007216.1-201ENST00000570197 601 ntTSL 4 BASIC17.59■□□□□ 0.41
CLPTM1O96005 PTGIR-205ENST00000597185 775 ntTSL 3 BASIC17.59■□□□□ 0.41
CLPTM1O96005 MIB2-202ENST00000378708 3012 ntAPPRIS ALT2 TSL 5 BASIC17.59■□□□□ 0.41
CLPTM1O96005 BRPF1-201ENST00000383829 4736 ntAPPRIS ALT1 TSL 1 (best) BASIC17.59■□□□□ 0.41
CLPTM1O96005 CNOT6-202ENST00000393356 6303 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
CLPTM1O96005 MOGS-205ENST00000452063 2568 ntAPPRIS ALT2 TSL 1 (best) BASIC17.59■□□□□ 0.41
CLPTM1O96005 AC011474.1-201ENST00000582581 2582 ntTSL 2 BASIC17.59■□□□□ 0.41
CLPTM1O96005 DAPK1-207ENST00000469640 5899 ntTSL 5 BASIC17.59■□□□□ 0.41
CLPTM1O96005 LTF-203ENST00000426532 2494 ntTSL 2 BASIC17.59■□□□□ 0.41
CLPTM1O96005 GAREM2-202ENST00000407684 5138 ntTSL 2 BASIC17.59■□□□□ 0.41
CLPTM1O96005 APOLD1-202ENST00000356591 4646 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
CLPTM1O96005 KRT23-201ENST00000209718 1987 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
CLPTM1O96005 POLR1D-220ENST00000637071 1943 ntTSL 5 BASIC17.59■□□□□ 0.41
CLPTM1O96005 ACAT1-201ENST00000265838 1761 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.41
CLPTM1O96005 CCNA1-202ENST00000440264 1758 ntAPPRIS P1 TSL 2 BASIC17.58■□□□□ 0.41
CLPTM1O96005 NRM-203ENST00000376421 1734 ntAPPRIS P2 TSL 1 (best) BASIC17.58■□□□□ 0.41
CLPTM1O96005 PTP4A3-201ENST00000329397 2785 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.41
CLPTM1O96005 ZBTB7C-201ENST00000535628 4818 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.41
CLPTM1O96005 FOXN3-209ENST00000555353 1595 ntAPPRIS P3 TSL 1 (best) BASIC17.58■□□□□ 0.41
CLPTM1O96005 NF2-208ENST00000403435 2568 ntTSL 5 BASIC17.58■□□□□ 0.41
CLPTM1O96005 NAPSA-201ENST00000253719 1548 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.41
CLPTM1O96005 DMAP1-202ENST00000361745 1545 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.41
CLPTM1O96005 CYP21A1P-202ENST00000354927 1481 ntBASIC17.58■□□□□ 0.41
CLPTM1O96005 AL645608.1-202ENST00000417705 1389 ntTSL 3 BASIC17.58■□□□□ 0.4
CLPTM1O96005 ESR1-210ENST00000456483 1368 ntTSL 1 (best) BASIC17.58■□□□□ 0.4
CLPTM1O96005 GNE-204ENST00000539208 2190 ntTSL 2 BASIC17.58■□□□□ 0.4
CLPTM1O96005 SBSPON-201ENST00000297354 3801 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
CLPTM1O96005 JDP2-202ENST00000419727 972 ntAPPRIS P1 TSL 2 BASIC17.58■□□□□ 0.4
CLPTM1O96005 MAGI2-AS3-209ENST00000448195 774 ntTSL 3 BASIC17.58■□□□□ 0.4
CLPTM1O96005 SNHG6-203ENST00000520944 638 ntTSL 1 (best) BASIC17.58■□□□□ 0.4
CLPTM1O96005 AP000785.1-201ENST00000527314 613 ntTSL 4 BASIC17.58■□□□□ 0.4
CLPTM1O96005 AC098934.4-201ENST00000564127 592 ntBASIC17.58■□□□□ 0.4
CLPTM1O96005 C17orf113-201ENST00000587304 3746 ntAPPRIS P1 TSL 5 BASIC17.58■□□□□ 0.4
Retrieved 100 of 98,524 protein–RNA pairs in 25.1 ms