Protein–RNA interactions for Protein: O95395

GCNT3, Beta-1,3-galactosyl-O-glycosyl-glycoprotein beta-1,6-N-acetylglucosaminyltransferase 3, humanhuman

Predictions only

Length 438 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GCNT3O95395 RASSF1-201ENST00000327761 1757 ntTSL 1 (best) BASIC20.57■□□□□ 0.88
GCNT3O95395 SIKE1-201ENST00000060969 2190 ntAPPRIS P3 TSL 1 (best) BASIC20.56■□□□□ 0.88
GCNT3O95395 DAG1-221ENST00000541308 5676 ntAPPRIS P1 TSL 5 BASIC20.56■□□□□ 0.88
GCNT3O95395 CREG2-201ENST00000324768 6383 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
GCNT3O95395 CYSTM1-201ENST00000261811 1336 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
GCNT3O95395 PEX16-202ENST00000378750 1335 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
GCNT3O95395 CBX1-202ENST00000393408 2422 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
GCNT3O95395 RTEL1-204ENST00000370003 2273 ntTSL 2 BASIC20.56■□□□□ 0.88
GCNT3O95395 TWIST2-202ENST00000612363 1404 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
GCNT3O95395 CLN3-206ENST00000360019 1840 ntTSL 2 BASIC20.56■□□□□ 0.88
GCNT3O95395 TFAP4-201ENST00000204517 2215 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
GCNT3O95395 RNF139-201ENST00000303545 2637 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
GCNT3O95395 LRRC23-202ENST00000323702 1208 ntAPPRIS ALT2 TSL 1 (best) BASIC20.56■□□□□ 0.88
GCNT3O95395 STXBP1-203ENST00000476182 566 ntTSL 5 BASIC20.56■□□□□ 0.88
GCNT3O95395 FP565260.3-205ENST00000620481 816 ntTSL 5 BASIC20.56■□□□□ 0.88
GCNT3O95395 AC008735.6-201ENST00000635964 1292 ntAPPRIS P1 TSL 2 BASIC20.56■□□□□ 0.88
GCNT3O95395 PRDM8-202ENST00000415738 3124 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
GCNT3O95395 SEMA6C-210ENST00000621728 1918 ntTSL 1 (best) BASIC20.56■□□□□ 0.88
GCNT3O95395 MAPK8IP3-216ENST00000610761 5626 ntAPPRIS ALT1 TSL 1 (best) BASIC20.56■□□□□ 0.88
GCNT3O95395 PLEKHG5-207ENST00000400913 4698 ntAPPRIS P3 TSL 5 BASIC20.56■□□□□ 0.88
GCNT3O95395 SNX17-201ENST00000233575 2044 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
GCNT3O95395 ARNT-202ENST00000358595 4887 ntAPPRIS P3 TSL 1 (best) BASIC20.56■□□□□ 0.88
GCNT3O95395 BTG3-201ENST00000339775 1485 ntTSL 1 (best) BASIC20.56■□□□□ 0.88
GCNT3O95395 SLC29A4-202ENST00000396872 5685 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
GCNT3O95395 PSAP-205ENST00000610929 1969 ntTSL 1 (best) BASIC20.55■□□□□ 0.88
GCNT3O95395 RREB1-201ENST00000334984 5789 ntAPPRIS ALT2 TSL 1 (best) BASIC20.55■□□□□ 0.88
GCNT3O95395 VPS26B-202ENST00000525095 1558 ntAPPRIS P1 TSL 5 BASIC20.55■□□□□ 0.88
GCNT3O95395 KCNH1-210ENST00000640044 1818 ntTSL 1 (best) BASIC20.55■□□□□ 0.88
GCNT3O95395 GRM2-204ENST00000442933 2064 ntTSL 5 BASIC20.55■□□□□ 0.88
GCNT3O95395 EPB41L2-211ENST00000525271 2568 ntTSL 2 BASIC20.55■□□□□ 0.88
GCNT3O95395 USP25-204ENST00000400183 5341 ntTSL 1 (best) BASIC20.55■□□□□ 0.88
GCNT3O95395 HOXC10-201ENST00000303460 1936 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
GCNT3O95395 PALM3-201ENST00000340790 2262 ntAPPRIS P2 TSL 5 BASIC20.55■□□□□ 0.88
GCNT3O95395 GAS2L1P2-202ENST00000442849 2262 ntTSL 1 (best) BASIC20.55■□□□□ 0.88
GCNT3O95395 MAN1B1-207ENST00000535144 2296 ntTSL 2 BASIC20.55■□□□□ 0.88
GCNT3O95395 BLOC1S3-201ENST00000433642 2601 ntAPPRIS P1 TSL 2 BASIC20.55■□□□□ 0.88
GCNT3O95395 PHB2-203ENST00000535923 1515 ntAPPRIS P2 TSL 5 BASIC20.55■□□□□ 0.88
GCNT3O95395 HMGA1P5-201ENST00000412453 271 ntBASIC20.55■□□□□ 0.88
GCNT3O95395 MUC1-211ENST00000438413 927 ntTSL 1 (best) BASIC20.55■□□□□ 0.88
GCNT3O95395 AC126763.1-201ENST00000552015 2118 ntBASIC20.55■□□□□ 0.88
GCNT3O95395 DUT-205ENST00000558813 769 ntTSL 2 BASIC20.55■□□□□ 0.88
GCNT3O95395 TMEM249-203ENST00000565365 975 ntAPPRIS P2 TSL 3 BASIC20.55■□□□□ 0.88
GCNT3O95395 RNF165-206ENST00000590330 1049 ntTSL 2 BASIC20.55■□□□□ 0.88
GCNT3O95395 PHOSPHO2-206ENST00000616481 1252 ntAPPRIS P1 TSL 3 BASIC20.55■□□□□ 0.88
GCNT3O95395 PHOSPHO2-208ENST00000617738 1053 ntAPPRIS P1 TSL 2 BASIC20.55■□□□□ 0.88
GCNT3O95395 SAMD11-216ENST00000620200 1874 ntTSL 5 BASIC20.55■□□□□ 0.88
GCNT3O95395 PAX1-201ENST00000398485 2838 ntAPPRIS P3 TSL 5 BASIC20.55■□□□□ 0.88
GCNT3O95395 OGFOD2-205ENST00000454694 1488 ntTSL 1 (best) BASIC20.55■□□□□ 0.88
GCNT3O95395 RNF135-201ENST00000324689 1905 ntTSL 1 (best) BASIC20.55■□□□□ 0.88
GCNT3O95395 CDC14B-203ENST00000375242 2965 ntTSL 2 BASIC20.55■□□□□ 0.88
GCNT3O95395 PPFIA1-202ENST00000389547 4133 ntAPPRIS ALT1 TSL 1 (best) BASIC20.55■□□□□ 0.88
GCNT3O95395 NFATC4-228ENST00000556759 2025 ntTSL 1 (best) BASIC20.54■□□□□ 0.88
GCNT3O95395 AC012615.6-201ENST00000593201 1697 ntTSL 2 BASIC20.54■□□□□ 0.88
GCNT3O95395 TICAM1-202ENST00000621756 1650 ntTSL 5 BASIC20.54■□□□□ 0.88
GCNT3O95395 IGFALS-202ENST00000415638 2136 ntTSL 2 BASIC20.54■□□□□ 0.88
GCNT3O95395 SYT8-202ENST00000381968 1424 ntAPPRIS P2 TSL 5 BASIC20.54■□□□□ 0.88
GCNT3O95395 COLCA2-201ENST00000398035 1414 ntTSL 1 (best) BASIC20.54■□□□□ 0.88
GCNT3O95395 FBXO24-202ENST00000427939 2087 ntTSL 2 BASIC20.54■□□□□ 0.88
GCNT3O95395 AC034236.2-201ENST00000606662 1610 ntBASIC20.54■□□□□ 0.88
GCNT3O95395 PRKCI-201ENST00000295797 4950 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
GCNT3O95395 MLLT1-201ENST00000252674 4507 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
GCNT3O95395 CYTH1-209ENST00000589296 2159 ntTSL 5 BASIC20.54■□□□□ 0.88
GCNT3O95395 TOX2-205ENST00000423191 1709 ntTSL 2 BASIC20.54■□□□□ 0.88
GCNT3O95395 GOLPH3-201ENST00000265070 2721 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
GCNT3O95395 VKORC1-202ENST00000319788 1077 ntTSL 1 (best) BASIC20.54■□□□□ 0.88
GCNT3O95395 ILF2-202ENST00000368681 726 ntTSL 2 BASIC20.54■□□□□ 0.88
GCNT3O95395 FAHD2CP-202ENST00000443258 893 ntTSL 3 BASIC20.54■□□□□ 0.88
GCNT3O95395 AC002467.1-201ENST00000457510 657 ntTSL 3 BASIC20.54■□□□□ 0.88
GCNT3O95395 TMUB1-205ENST00000482202 899 ntAPPRIS P1 TSL 3 BASIC20.54■□□□□ 0.88
GCNT3O95395 AC079385.1-202ENST00000549203 569 ntTSL 4 BASIC20.54■□□□□ 0.88
GCNT3O95395 AC005606.2-201ENST00000564438 614 ntTSL 2 BASIC20.54■□□□□ 0.88
GCNT3O95395 AC004448.5-201ENST00000579897 567 ntTSL 5 BASIC20.54■□□□□ 0.88
GCNT3O95395 JOSD2-204ENST00000598418 996 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
GCNT3O95395 ZNF134-203ENST00000600344 483 ntTSL 1 (best) BASIC20.54■□□□□ 0.88
GCNT3O95395 TRAPPC6A-201ENST00000006275 805 ntTSL 1 (best) BASIC20.54■□□□□ 0.88
GCNT3O95395 UVSSA-207ENST00000511216 2927 ntAPPRIS P2 TSL 1 (best) BASIC20.54■□□□□ 0.88
GCNT3O95395 SLC22A17-204ENST00000397267 2455 ntAPPRIS P4 TSL 5 BASIC20.54■□□□□ 0.88
GCNT3O95395 PON1-201ENST00000222381 2568 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
GCNT3O95395 ATRIP-201ENST00000320211 2590 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
GCNT3O95395 CHRNA4-207ENST00000615287 5643 ntTSL 5 BASIC20.54■□□□□ 0.88
GCNT3O95395 AC138028.1-201ENST00000333666 2137 ntTSL 2 BASIC20.54■□□□□ 0.88
GCNT3O95395 PPP1R7-207ENST00000407025 1592 ntAPPRIS P1 TSL 5 BASIC20.54■□□□□ 0.88
GCNT3O95395 SLC2A14-214ENST00000542505 1650 ntTSL 1 (best) BASIC20.54■□□□□ 0.88
GCNT3O95395 NPEPL1-203ENST00000525817 1780 ntTSL 2 BASIC20.54■□□□□ 0.88
GCNT3O95395 AC104581.1-202ENST00000635932 2618 ntBASIC20.54■□□□□ 0.88
GCNT3O95395 USP48-204ENST00000400301 4309 ntTSL 1 (best) BASIC20.54■□□□□ 0.88
GCNT3O95395 CUTC-202ENST00000370476 1346 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
GCNT3O95395 OR13J1-201ENST00000377981 1339 ntAPPRIS P1 BASIC20.53■□□□□ 0.88
GCNT3O95395 AC005082.1-201ENST00000413042 2259 ntBASIC20.53■□□□□ 0.88
GCNT3O95395 UBE2I-203ENST00000397514 2976 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
GCNT3O95395 CARNS1-205ENST00000531040 2968 ntTSL 5 BASIC20.53■□□□□ 0.88
GCNT3O95395 FAM206A-201ENST00000322940 2134 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
GCNT3O95395 TMEM109-201ENST00000227525 2413 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
GCNT3O95395 PCOLCE-AS1-201ENST00000442166 2537 ntTSL 2 BASIC20.53■□□□□ 0.88
GCNT3O95395 LINC01534-202ENST00000433232 554 ntTSL 3 BASIC20.53■□□□□ 0.88
GCNT3O95395 HMGB3P22-201ENST00000442010 597 ntTSL 2 BASIC20.53■□□□□ 0.88
GCNT3O95395 DCTN3-209ENST00000477738 713 ntTSL 3 BASIC20.53■□□□□ 0.88
GCNT3O95395 NDUFB10-202ENST00000543683 830 ntTSL 1 (best) BASIC20.53■□□□□ 0.88
GCNT3O95395 WWOX-216ENST00000569818 525 ntBASIC20.53■□□□□ 0.88
GCNT3O95395 ST20-MTHFS-203ENST00000615374 679 ntAPPRIS P1 TSL 3 BASIC20.53■□□□□ 0.88
Retrieved 100 of 98,524 protein–RNA pairs in 50.2 ms