Protein–RNA interactions for Protein: O95219

SNX4, Sorting nexin-4, humanhuman

Predictions only

Length 450 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SNX4O95219 NUDT15-201ENST00000258662 2098 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
SNX4O95219 PCDHA1-202ENST00000394633 2204 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
SNX4O95219 NCF1-201ENST00000289473 1396 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
SNX4O95219 SLC25A3-211ENST00000548847 1369 ntTSL 5 BASIC17.53■□□□□ 0.4
SNX4O95219 DCHS2-201ENST00000339452 5064 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
SNX4O95219 PSMG4-209ENST00000473000 4603 ntTSL 2 BASIC17.53■□□□□ 0.4
SNX4O95219 GTF2H4-201ENST00000259895 1735 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
SNX4O95219 AKNA-205ENST00000374079 2138 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
SNX4O95219 GORASP1-206ENST00000422110 2523 ntTSL 2 BASIC17.53■□□□□ 0.4
SNX4O95219 AC018470.1-201ENST00000624790 3129 ntBASIC17.53■□□□□ 0.4
SNX4O95219 EIF2B1-201ENST00000424014 2477 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
SNX4O95219 C19orf48-202ENST00000391812 1666 ntAPPRIS P1 TSL 2 BASIC17.53■□□□□ 0.4
SNX4O95219 AL050404.1-201ENST00000424566 802 ntTSL 2 BASIC17.53■□□□□ 0.4
SNX4O95219 AL731557.1-201ENST00000425264 744 ntTSL 3 BASIC17.53■□□□□ 0.4
SNX4O95219 ANK1-211ENST00000522231 1060 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
SNX4O95219 ANK1-212ENST00000522543 1160 ntTSL 2 BASIC17.53■□□□□ 0.4
SNX4O95219 AZIN1-AS1-215ENST00000522939 644 ntTSL 2 BASIC17.53■□□□□ 0.4
SNX4O95219 C2orf69P3-201ENST00000565542 1120 ntBASIC17.53■□□□□ 0.4
SNX4O95219 AC133561.5-201ENST00000635547 218 ntBASIC17.53■□□□□ 0.4
SNX4O95219 TWF1-201ENST00000395510 3045 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
SNX4O95219 GPR135-201ENST00000395116 4578 ntAPPRIS P1 BASIC17.53■□□□□ 0.4
SNX4O95219 PRKAR2A-206ENST00000454963 1849 ntAPPRIS P1 TSL 2 BASIC17.53■□□□□ 0.4
SNX4O95219 RAB4A-201ENST00000366690 2966 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
SNX4O95219 JAG1-201ENST00000254958 6048 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
SNX4O95219 ASNS-206ENST00000437628 1638 ntTSL 2 BASIC17.53■□□□□ 0.4
SNX4O95219 ADGRG2-208ENST00000379873 4698 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
SNX4O95219 DCLK2-207ENST00000635524 2153 ntAPPRIS ALT2 TSL 5 BASIC17.53■□□□□ 0.4
SNX4O95219 LONP1-215ENST00000593119 2918 ntTSL 2 BASIC17.53■□□□□ 0.4
SNX4O95219 HTR7P1-202ENST00000624664 4411 ntBASIC17.53■□□□□ 0.4
SNX4O95219 C2CD2L-201ENST00000336702 4771 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
SNX4O95219 TEPSIN-201ENST00000300714 2287 ntAPPRIS P2 TSL 1 (best) BASIC17.52■□□□□ 0.4
SNX4O95219 YPEL5-205ENST00000402708 1735 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
SNX4O95219 ISM2-207ENST00000493585 1739 ntTSL 1 (best) BASIC17.52■□□□□ 0.4
SNX4O95219 PSMD8-210ENST00000620216 1538 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
SNX4O95219 ANXA8L1-203ENST00000613703 1874 ntTSL 2 BASIC17.52■□□□□ 0.4
SNX4O95219 ZBTB33-201ENST00000326624 5211 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
SNX4O95219 CACNA1B-205ENST00000371363 9758 ntAPPRIS ALT2 TSL 5 BASIC17.52■□□□□ 0.4
SNX4O95219 AL445433.2-201ENST00000425113 2544 ntTSL 2 BASIC17.52■□□□□ 0.4
SNX4O95219 WNT5B-201ENST00000310594 2184 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
SNX4O95219 ZNF394-201ENST00000337673 2179 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
SNX4O95219 UBE2O-201ENST00000319380 5436 ntAPPRIS P2 TSL 1 (best) BASIC17.52■□□□□ 0.4
SNX4O95219 ZIC1-201ENST00000282928 5241 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
SNX4O95219 MPC2-201ENST00000271373 798 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
SNX4O95219 CACYBP-202ENST00000405362 1059 ntTSL 5 BASIC17.52■□□□□ 0.4
SNX4O95219 KCNMA1-220ENST00000481070 896 ntTSL 2 BASIC17.52■□□□□ 0.4
SNX4O95219 PRSS44-201ENST00000515154 1146 ntBASIC17.52■□□□□ 0.4
SNX4O95219 SQSTM1-216ENST00000626660 274 ntTSL 5 BASIC17.52■□□□□ 0.4
SNX4O95219 ASRGL1-211ENST00000628829 1161 ntTSL 1 (best) BASIC17.52■□□□□ 0.4
SNX4O95219 ARL5A-201ENST00000295087 5326 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
SNX4O95219 TMEM235-203ENST00000550981 1786 ntTSL 2 BASIC17.52■□□□□ 0.4
SNX4O95219 RTEL1-204ENST00000370003 2273 ntTSL 2 BASIC17.52■□□□□ 0.4
SNX4O95219 BIRC2-206ENST00000530675 1927 ntTSL 2 BASIC17.52■□□□□ 0.4
SNX4O95219 PPP1R3F-202ENST00000376188 2443 ntTSL 2 BASIC17.52■□□□□ 0.4
SNX4O95219 EFR3A-201ENST00000254624 5438 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.39
SNX4O95219 CD55-201ENST00000314754 2220 ntAPPRIS ALT2 TSL 1 (best) BASIC17.52■□□□□ 0.39
SNX4O95219 ING5-201ENST00000313552 5196 ntAPPRIS P3 TSL 1 (best) BASIC17.52■□□□□ 0.39
SNX4O95219 EMX2-203ENST00000553456 2897 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.39
SNX4O95219 CRKL-201ENST00000354336 5325 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.39
SNX4O95219 TACSTD2-201ENST00000371225 2351 ntAPPRIS P1 BASIC17.52■□□□□ 0.39
SNX4O95219 FOXI3-201ENST00000428390 2804 ntAPPRIS P1 TSL 3 BASIC17.52■□□□□ 0.39
SNX4O95219 SLC25A41-201ENST00000321510 1532 ntAPPRIS P1 TSL 5 BASIC17.52■□□□□ 0.39
SNX4O95219 SLC25A29-215ENST00000556505 1540 ntTSL 2 BASIC17.52■□□□□ 0.39
SNX4O95219 RPL7-202ENST00000396465 1308 ntTSL 3 BASIC17.51■□□□□ 0.39
SNX4O95219 OGFOD2-222ENST00000545317 1481 ntTSL 2 BASIC17.51■□□□□ 0.39
SNX4O95219 SBDS-201ENST00000246868 1631 ntAPPRIS P2 TSL 1 (best) BASIC17.51■□□□□ 0.39
SNX4O95219 NUMBL-202ENST00000540131 1931 ntAPPRIS ALT2 TSL 2 BASIC17.51■□□□□ 0.39
SNX4O95219 KCNQ2-213ENST00000626839 9213 ntAPPRIS ALT1 TSL 1 (best) BASIC17.51■□□□□ 0.39
SNX4O95219 SLC35F5-201ENST00000245680 4412 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
SNX4O95219 NUBP2-201ENST00000262302 1413 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
SNX4O95219 FOXD4L1-201ENST00000306507 2491 ntAPPRIS P1 BASIC17.51■□□□□ 0.39
SNX4O95219 PMVK-201ENST00000368467 1280 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
SNX4O95219 PLK3-201ENST00000372201 2492 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
SNX4O95219 GPM6B-204ENST00000398361 1033 ntTSL 2 BASIC17.51■□□□□ 0.39
SNX4O95219 AL390955.1-201ENST00000428694 934 ntBASIC17.51■□□□□ 0.39
SNX4O95219 MUC1-211ENST00000438413 927 ntTSL 1 (best) BASIC17.51■□□□□ 0.39
SNX4O95219 C6orf223-202ENST00000439969 2757 ntTSL 2 BASIC17.51■□□□□ 0.39
SNX4O95219 MFAP1P1-201ENST00000442257 1255 ntBASIC17.51■□□□□ 0.39
SNX4O95219 AC108025.1-201ENST00000453678 1058 ntTSL 5 BASIC17.51■□□□□ 0.39
SNX4O95219 AC008771.1-201ENST00000508000 1151 ntTSL 2 BASIC17.51■□□□□ 0.39
SNX4O95219 IRF3-222ENST00000599144 1117 ntTSL 1 (best) BASIC17.51■□□□□ 0.39
SNX4O95219 AC097493.4-201ENST00000641197 219 ntBASIC17.51■□□□□ 0.39
SNX4O95219 CLUH-201ENST00000435359 5224 ntAPPRIS P2 TSL 5 BASIC17.51■□□□□ 0.39
SNX4O95219 PDLIM3-201ENST00000284767 2589 ntTSL 5 BASIC17.51■□□□□ 0.39
SNX4O95219 RELB-201ENST00000221452 2294 ntAPPRIS P2 TSL 1 (best) BASIC17.51■□□□□ 0.39
SNX4O95219 PLEKHB1-203ENST00000398492 2275 ntAPPRIS ALT1 TSL 1 (best) BASIC17.51■□□□□ 0.39
SNX4O95219 TREX2-203ENST00000338525 2116 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
SNX4O95219 RRN3-205ENST00000563559 2128 ntTSL 5 BASIC17.51■□□□□ 0.39
SNX4O95219 SPON2-203ENST00000431380 1802 ntAPPRIS P1 TSL 5 BASIC17.51■□□□□ 0.39
SNX4O95219 MAP3K11-210ENST00000532507 1812 ntTSL 2 BASIC17.51■□□□□ 0.39
SNX4O95219 EXTL3-201ENST00000220562 6483 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
SNX4O95219 COL27A1-201ENST00000356083 7790 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
SNX4O95219 AL390860.1-201ENST00000449298 1541 ntTSL 1 (best) BASIC17.51■□□□□ 0.39
SNX4O95219 AL133373.2-201ENST00000623187 2828 ntBASIC17.51■□□□□ 0.39
SNX4O95219 MCCC1-201ENST00000265594 2545 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
SNX4O95219 GRK6-201ENST00000355472 2939 ntAPPRIS P3 TSL 1 (best) BASIC17.51■□□□□ 0.39
SNX4O95219 MAPK8IP3-201ENST00000250894 5661 ntAPPRIS P3 TSL 1 (best) BASIC17.5■□□□□ 0.39
SNX4O95219 RAB11FIP2-201ENST00000355624 6061 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
SNX4O95219 WWP1-202ENST00000517970 4686 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
SNX4O95219 DDAH2-211ENST00000375787 1330 ntAPPRIS P1 TSL 5 BASIC17.5■□□□□ 0.39
SNX4O95219 SMN1-209ENST00000514951 1308 ntTSL 2 BASIC17.5■□□□□ 0.39
Retrieved 100 of 98,524 protein–RNA pairs in 36 ms