Protein–RNA interactions for Protein: O75127

PTCD1, Pentatricopeptide repeat-containing protein 1, mitochondrial, humanhuman

Known RBP Predictions only

Length 700 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PTCD1O75127 KRT16P4-201ENST00000453883 522 ntBASIC23.92■■□□□ 1.42
PTCD1O75127 PLPP5-214ENST00000531823 875 ntTSL 3 BASIC23.92■■□□□ 1.42
PTCD1O75127 AP003555.3-201ENST00000534086 432 ntTSL 4 BASIC23.92■■□□□ 1.42
PTCD1O75127 CD177-202ENST00000607855 536 ntTSL 1 (best) BASIC23.92■■□□□ 1.42
PTCD1O75127 AC124864.1-201ENST00000623408 392 ntBASIC23.92■■□□□ 1.42
PTCD1O75127 CYP51A1P1-201ENST00000492267 1507 ntBASIC23.92■■□□□ 1.42
PTCD1O75127 NRXN1-226ENST00000626899 2543 ntTSL 2 BASIC23.92■■□□□ 1.42
PTCD1O75127 EIF2B1-201ENST00000424014 2477 ntAPPRIS P1 TSL 1 (best) BASIC23.92■■□□□ 1.42
PTCD1O75127 RTKN-201ENST00000233330 2220 ntTSL 1 (best) BASIC23.92■■□□□ 1.42
PTCD1O75127 C19orf25-201ENST00000427685 1410 ntTSL 2 BASIC23.92■■□□□ 1.42
PTCD1O75127 TTC3-203ENST00000399010 2115 ntTSL 5 BASIC23.92■■□□□ 1.42
PTCD1O75127 MAP7D1-201ENST00000316156 3456 ntAPPRIS ALT2 TSL 1 (best) BASIC23.92■■□□□ 1.42
PTCD1O75127 CLPB-202ENST00000340729 2071 ntTSL 2 BASIC23.91■■□□□ 1.42
PTCD1O75127 PALM-202ENST00000338448 2725 ntAPPRIS P4 TSL 1 (best) BASIC23.91■■□□□ 1.42
PTCD1O75127 TRIP4-201ENST00000261884 2045 ntAPPRIS P1 TSL 1 (best) BASIC23.91■■□□□ 1.42
PTCD1O75127 FOXD4-201ENST00000382500 1974 ntAPPRIS P1 BASIC23.91■■□□□ 1.42
PTCD1O75127 SNRPA1-201ENST00000254193 1055 ntAPPRIS P1 TSL 1 (best) BASIC23.91■■□□□ 1.42
PTCD1O75127 CCDC134-201ENST00000255784 1270 ntAPPRIS P1 TSL 1 (best) BASIC23.91■■□□□ 1.42
PTCD1O75127 MRPL43-203ENST00000318364 1010 ntAPPRIS P1 TSL 1 (best) BASIC23.91■■□□□ 1.42
PTCD1O75127 MRPL43-204ENST00000342071 894 ntTSL 5 BASIC23.91■■□□□ 1.42
PTCD1O75127 C1orf43-204ENST00000368518 1278 ntTSL 1 (best) BASIC23.91■■□□□ 1.42
PTCD1O75127 EXOSC3-202ENST00000396521 768 ntTSL 2 BASIC23.91■■□□□ 1.42
PTCD1O75127 EEF1E1-202ENST00000429723 562 ntTSL 3 BASIC23.91■■□□□ 1.42
PTCD1O75127 DMKN-215ENST00000451297 1111 ntAPPRIS ALT2 TSL 1 (best) BASIC23.91■■□□□ 1.42
PTCD1O75127 AP002469.2-201ENST00000531724 424 ntBASIC23.91■■□□□ 1.42
PTCD1O75127 EFCAB11-211ENST00000556609 568 ntTSL 3 BASIC23.91■■□□□ 1.42
PTCD1O75127 BMF-207ENST00000559701 630 ntTSL 3 BASIC23.91■■□□□ 1.42
PTCD1O75127 TEN1-204ENST00000588202 862 ntTSL 3 BASIC23.91■■□□□ 1.42
PTCD1O75127 AL592071.1-201ENST00000611956 408 ntBASIC23.91■■□□□ 1.42
PTCD1O75127 NDUFA6-204ENST00000617763 1183 ntTSL 1 (best) BASIC23.91■■□□□ 1.42
PTCD1O75127 SETMAR-206ENST00000430981 1671 ntTSL 1 (best) BASIC23.91■■□□□ 1.42
PTCD1O75127 P2RX2-206ENST00000389110 1867 ntAPPRIS ALT2 TSL 1 (best) BASIC23.91■■□□□ 1.42
PTCD1O75127 FP475955.4-201ENST00000623131 1990 ntBASIC23.91■■□□□ 1.42
PTCD1O75127 LINC00466-207ENST00000634725 1736 ntTSL 5 BASIC23.9■■□□□ 1.42
PTCD1O75127 NEK2-205ENST00000540251 1318 ntTSL 1 (best) BASIC23.9■■□□□ 1.42
PTCD1O75127 CD81-AS1-201ENST00000413483 1460 ntTSL 2 BASIC23.9■■□□□ 1.42
PTCD1O75127 NDOR1-204ENST00000458322 1829 ntTSL 1 (best) BASIC23.9■■□□□ 1.42
PTCD1O75127 AIRN-201ENST00000601203 4374 ntBASIC23.9■■□□□ 1.42
PTCD1O75127 TPM1-203ENST00000317516 738 ntTSL 1 (best) BASIC23.9■■□□□ 1.42
PTCD1O75127 NDUFA12-201ENST00000327772 635 ntAPPRIS P1 TSL 1 (best) BASIC23.9■■□□□ 1.42
PTCD1O75127 CMTM1-204ENST00000336328 606 ntAPPRIS ALT2 TSL 1 (best) BASIC23.9■■□□□ 1.42
PTCD1O75127 CKLF-202ENST00000345436 571 ntAPPRIS ALT2 TSL 1 (best) BASIC23.9■■□□□ 1.42
PTCD1O75127 MAL-203ENST00000353004 873 ntTSL 1 (best) BASIC23.9■■□□□ 1.42
PTCD1O75127 CD1E-203ENST00000368156 861 ntTSL 1 (best) BASIC23.9■■□□□ 1.42
PTCD1O75127 AL022342.1-201ENST00000400363 863 ntBASIC23.9■■□□□ 1.42
PTCD1O75127 SBDSP1-202ENST00000423945 618 ntTSL 3 BASIC23.9■■□□□ 1.42
PTCD1O75127 AC079776.4-201ENST00000511039 504 ntBASIC23.9■■□□□ 1.42
PTCD1O75127 CMTM1-213ENST00000529506 581 ntAPPRIS ALT2 TSL 1 (best) BASIC23.9■■□□□ 1.42
PTCD1O75127 TPM1-218ENST00000559281 851 ntTSL 5 BASIC23.9■■□□□ 1.42
PTCD1O75127 Metazoa_SRP.104-201ENST00000622099 280 ntBASIC23.9■■□□□ 1.42
PTCD1O75127 PODXL2-201ENST00000342480 2186 ntAPPRIS P1 TSL 1 (best) BASIC23.9■■□□□ 1.42
PTCD1O75127 LRRC23-201ENST00000007969 1615 ntAPPRIS P4 TSL 1 (best) BASIC23.9■■□□□ 1.42
PTCD1O75127 NARS2-201ENST00000281038 2519 ntAPPRIS P1 TSL 1 (best) BASIC23.9■■□□□ 1.42
PTCD1O75127 THOC3-208ENST00000513482 1796 ntTSL 1 (best) BASIC23.9■■□□□ 1.42
PTCD1O75127 SPRYD7-204ENST00000613924 2285 ntTSL 1 (best) BASIC23.9■■□□□ 1.42
PTCD1O75127 CHRNB4-202ENST00000412074 1355 ntTSL 1 (best) BASIC23.9■■□□□ 1.42
PTCD1O75127 ABHD14B-204ENST00000461108 1397 ntTSL 2 BASIC23.9■■□□□ 1.42
PTCD1O75127 UTP4-201ENST00000314423 2322 ntAPPRIS P1 TSL 1 (best) BASIC23.89■■□□□ 1.42
PTCD1O75127 ALDOA-212ENST00000564546 2104 ntAPPRIS P2 TSL 1 (best) BASIC23.89■■□□□ 1.42
PTCD1O75127 ZBED3-201ENST00000255198 6172 ntAPPRIS P2 TSL 1 (best) BASIC23.89■■□□□ 1.42
PTCD1O75127 LRRC23-209ENST00000443597 1628 ntAPPRIS P4 TSL 1 (best) BASIC23.89■■□□□ 1.42
PTCD1O75127 KCNIP4-205ENST00000382152 1767 ntTSL 5 BASIC23.89■■□□□ 1.42
PTCD1O75127 ZXDC-201ENST00000336332 2579 ntAPPRIS ALT2 TSL 1 (best) BASIC23.89■■□□□ 1.42
PTCD1O75127 RNF135-201ENST00000324689 1905 ntTSL 1 (best) BASIC23.89■■□□□ 1.42
PTCD1O75127 CEP85L-205ENST00000419517 2079 ntAPPRIS P3 TSL 1 (best) BASIC23.89■■□□□ 1.41
PTCD1O75127 ATP5J-201ENST00000284971 614 ntAPPRIS P1 TSL 1 (best) BASIC23.89■■□□□ 1.41
PTCD1O75127 HDDC3-201ENST00000330334 1047 ntTSL 1 (best) BASIC23.89■■□□□ 1.41
PTCD1O75127 MRPL43-208ENST00000370242 884 ntTSL 2 BASIC23.89■■□□□ 1.41
PTCD1O75127 SEC61G-203ENST00000415949 732 ntAPPRIS P1 TSL 5 BASIC23.89■■□□□ 1.41
PTCD1O75127 DARS-AS1-202ENST00000419808 772 ntTSL 5 BASIC23.89■■□□□ 1.41
PTCD1O75127 IGHV3-47-201ENST00000425060 335 ntBASIC23.89■■□□□ 1.41
PTCD1O75127 MRPL28-203ENST00000429738 310 ntTSL 2 BASIC23.89■■□□□ 1.41
PTCD1O75127 NOP16-205ENST00000509257 1000 ntTSL 2 BASIC23.89■■□□□ 1.41
PTCD1O75127 AC007220.1-201ENST00000572466 1055 ntTSL 3 BASIC23.89■■□□□ 1.41
PTCD1O75127 MIR3180-4-201ENST00000582223 153 ntBASIC23.89■■□□□ 1.41
PTCD1O75127 SLC25A6P4-201ENST00000586535 553 ntBASIC23.89■■□□□ 1.41
PTCD1O75127 SMIM22-203ENST00000588500 525 ntAPPRIS ALT2 TSL 1 (best) BASIC23.89■■□□□ 1.41
PTCD1O75127 Z69720.1-201ENST00000601483 472 ntBASIC23.89■■□□□ 1.41
PTCD1O75127 AC024563.2-201ENST00000603282 481 ntBASIC23.89■■□□□ 1.41
PTCD1O75127 AL353801.3-201ENST00000609898 542 ntBASIC23.89■■□□□ 1.41
PTCD1O75127 METTL23-215ENST00000615984 1171 ntAPPRIS P1 TSL 2 BASIC23.89■■□□□ 1.41
PTCD1O75127 IZUMO4-213ENST00000620263 947 ntTSL 3 BASIC23.89■■□□□ 1.41
PTCD1O75127 MRPS7-204ENST00000579761 1717 ntTSL 2 BASIC23.89■■□□□ 1.41
PTCD1O75127 HSPD1-202ENST00000388968 2455 ntAPPRIS P1 TSL 1 (best) BASIC23.89■■□□□ 1.41
PTCD1O75127 C3orf18-203ENST00000426034 2486 ntAPPRIS P1 TSL 1 (best) BASIC23.89■■□□□ 1.41
PTCD1O75127 HPS6-201ENST00000299238 2649 ntAPPRIS P1 BASIC23.89■■□□□ 1.41
PTCD1O75127 CCSAP-203ENST00000366687 5089 ntAPPRIS P1 TSL 1 (best) BASIC23.89■■□□□ 1.41
PTCD1O75127 AC233280.1-201ENST00000423600 1684 ntTSL 2 BASIC23.89■■□□□ 1.41
PTCD1O75127 AC141586.3-201ENST00000562166 1838 ntBASIC23.89■■□□□ 1.41
PTCD1O75127 RELT-202ENST00000393580 2669 ntAPPRIS P1 TSL 1 (best) BASIC23.88■■□□□ 1.41
PTCD1O75127 OTOP3-201ENST00000328801 2363 ntAPPRIS P1 TSL 2 BASIC23.88■■□□□ 1.41
PTCD1O75127 TRIM13-206ENST00000457662 1489 ntAPPRIS P3 TSL 1 (best) BASIC23.88■■□□□ 1.41
PTCD1O75127 KCNJ12-202ENST00000583088 5425 ntAPPRIS P1 TSL 1 (best) BASIC23.88■■□□□ 1.41
PTCD1O75127 AC109460.3-201ENST00000569969 5296 ntTSL 2 BASIC23.88■■□□□ 1.41
PTCD1O75127 MRPL3P1-201ENST00000400109 1033 ntBASIC23.88■■□□□ 1.41
PTCD1O75127 PQLC2L-205ENST00000461040 563 ntAPPRIS ALT2 TSL 3 BASIC23.88■■□□□ 1.41
PTCD1O75127 RN7SL606P-201ENST00000472779 293 ntBASIC23.88■■□□□ 1.41
PTCD1O75127 BET1L-206ENST00000486280 665 ntTSL 3 BASIC23.88■■□□□ 1.41
PTCD1O75127 AC091607.1-201ENST00000490318 1060 ntBASIC23.88■■□□□ 1.41
PTCD1O75127 AC099805.1-202ENST00000519927 1057 ntTSL 5 BASIC23.88■■□□□ 1.41
Retrieved 100 of 98,524 protein–RNA pairs in 32.3 ms