Protein–RNA interactions for Protein: O43707

ACTN4, Alpha-actinin-4, humanhuman

Known RBP Predictions only

Length 911 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ACTN4O43707 SLC39A3-202ENST00000455372 2940 ntTSL 1 (best) BASIC20.94■□□□□ 0.94
ACTN4O43707 LTBP4-201ENST00000204005 5032 ntAPPRIS ALT2 TSL 1 (best) BASIC20.94■□□□□ 0.94
ACTN4O43707 AL023284.2-201ENST00000405850 579 ntBASIC20.94■□□□□ 0.94
ACTN4O43707 POLR2D-202ENST00000409698 806 ntTSL 2 BASIC20.94■□□□□ 0.94
ACTN4O43707 AC092718.1-201ENST00000501068 1088 ntTSL 1 (best) BASIC20.94■□□□□ 0.94
ACTN4O43707 KRT18P41-201ENST00000518924 1277 ntBASIC20.94■□□□□ 0.94
ACTN4O43707 COX6C-208ENST00000522940 694 ntAPPRIS P1 TSL 3 BASIC20.94■□□□□ 0.94
ACTN4O43707 AC003005.1-201ENST00000601674 582 ntAPPRIS P5 TSL 2 BASIC20.94■□□□□ 0.94
ACTN4O43707 AL049637.2-201ENST00000641778 930 ntBASIC20.94■□□□□ 0.94
ACTN4O43707 ARPC4-201ENST00000397261 2582 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
ACTN4O43707 ZNF114-206ENST00000600687 1742 ntAPPRIS P1 TSL 5 BASIC20.94■□□□□ 0.94
ACTN4O43707 PPP2R2C-209ENST00000515571 1832 ntTSL 1 (best) BASIC20.94■□□□□ 0.94
ACTN4O43707 IL1R1-205ENST00000410023 5143 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
ACTN4O43707 FAM117B-201ENST00000392238 5763 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
ACTN4O43707 SLC37A2-203ENST00000403796 2910 ntAPPRIS ALT1 TSL 2 BASIC20.94■□□□□ 0.94
ACTN4O43707 SEPHS1-206ENST00000545675 2988 ntTSL 1 (best) BASIC20.94■□□□□ 0.94
ACTN4O43707 SOD2-206ENST00000452684 2045 ntTSL 1 (best) BASIC20.94■□□□□ 0.94
ACTN4O43707 INTS11-249ENST00000618806 1523 ntTSL 2 BASIC20.94■□□□□ 0.94
ACTN4O43707 GPATCH3-201ENST00000361720 2123 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
ACTN4O43707 NRBP1-203ENST00000379852 2163 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
ACTN4O43707 RAP1GAP-204ENST00000374761 3318 ntTSL 5 BASIC20.93■□□□□ 0.94
ACTN4O43707 GPAT2P1-201ENST00000444924 1672 ntBASIC20.93■□□□□ 0.94
ACTN4O43707 TICAM1-202ENST00000621756 1650 ntTSL 5 BASIC20.93■□□□□ 0.94
ACTN4O43707 NAP1L5-201ENST00000323061 2321 ntAPPRIS P1 BASIC20.93■□□□□ 0.94
ACTN4O43707 PPM1G-201ENST00000344034 2311 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
ACTN4O43707 RPS6KA1-204ENST00000374168 3186 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
ACTN4O43707 WDR74-201ENST00000278856 1289 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
ACTN4O43707 ENSA-205ENST00000361532 792 ntTSL 2 BASIC20.93■□□□□ 0.94
ACTN4O43707 VSIG2-202ENST00000403470 1191 ntTSL 2 BASIC20.93■□□□□ 0.94
ACTN4O43707 REPIN1-210ENST00000482680 1029 ntTSL 2 BASIC20.93■□□□□ 0.94
ACTN4O43707 AC093752.1-201ENST00000511950 605 ntTSL 4 BASIC20.93■□□□□ 0.94
ACTN4O43707 PENK-204ENST00000518770 863 ntTSL 2 BASIC20.93■□□□□ 0.94
ACTN4O43707 CBLN3-202ENST00000555436 718 ntTSL 3 BASIC20.93■□□□□ 0.94
ACTN4O43707 REXO1L10P-201ENST00000615707 1290 ntBASIC20.93■□□□□ 0.94
ACTN4O43707 ADORA1-208ENST00000618295 862 ntTSL 1 (best) BASIC20.93■□□□□ 0.94
ACTN4O43707 REXO1L12P-201ENST00000622156 912 ntBASIC20.93■□□□□ 0.94
ACTN4O43707 MYC-208ENST00000641036 567 ntBASIC20.93■□□□□ 0.94
ACTN4O43707 AC097662.2-201ENST00000641359 267 ntAPPRIS P1 BASIC20.93■□□□□ 0.94
ACTN4O43707 CTNNBL1-201ENST00000361383 1925 ntAPPRIS P2 TSL 1 (best) BASIC20.93■□□□□ 0.94
ACTN4O43707 PDE4A-202ENST00000344979 2579 ntTSL 1 (best) BASIC20.93■□□□□ 0.94
ACTN4O43707 RBP4-202ENST00000371467 1314 ntAPPRIS P1 TSL 5 BASIC20.93■□□□□ 0.94
ACTN4O43707 SMN2-202ENST00000380742 1388 ntAPPRIS ALT2 TSL 5 BASIC20.93■□□□□ 0.94
ACTN4O43707 DYNLL1-209ENST00000550845 1376 ntTSL 1 (best) BASIC20.93■□□□□ 0.94
ACTN4O43707 C19orf25-207ENST00000588871 2128 ntTSL 5 BASIC20.93■□□□□ 0.94
ACTN4O43707 MRPL3-202ENST00000425847 1457 ntTSL 2 BASIC20.93■□□□□ 0.94
ACTN4O43707 RRP7BP-201ENST00000357802 2375 ntTSL 1 (best) BASIC20.93■□□□□ 0.94
ACTN4O43707 MAPK9-208ENST00000455781 4336 ntAPPRIS ALT1 TSL 2 BASIC20.92■□□□□ 0.94
ACTN4O43707 SLC25A43-201ENST00000217909 2783 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
ACTN4O43707 CIZ1-226ENST00000629610 2855 ntAPPRIS ALT2 TSL 2 BASIC20.92■□□□□ 0.94
ACTN4O43707 PRSS23-209ENST00000533902 2043 ntTSL 4 BASIC20.92■□□□□ 0.94
ACTN4O43707 IAH1-202ENST00000470914 2137 ntTSL 1 (best) BASIC20.92■□□□□ 0.94
ACTN4O43707 FBXL15-201ENST00000224862 2362 ntAPPRIS P2 TSL 1 (best) BASIC20.92■□□□□ 0.94
ACTN4O43707 SYNE4-202ENST00000340477 1004 ntAPPRIS ALT2 TSL 1 (best) BASIC20.92■□□□□ 0.94
ACTN4O43707 GLYCTK-205ENST00000473032 935 ntTSL 1 (best) BASIC20.92■□□□□ 0.94
ACTN4O43707 CHEK2P2-202ENST00000555186 864 ntTSL 2 BASIC20.92■□□□□ 0.94
ACTN4O43707 SLC25A1P4-201ENST00000567977 778 ntBASIC20.92■□□□□ 0.94
ACTN4O43707 SCYL1-203ENST00000420247 2583 ntTSL 1 (best) BASIC20.92■□□□□ 0.94
ACTN4O43707 STARD7-AS1-202ENST00000446816 1527 ntTSL 2 BASIC20.92■□□□□ 0.94
ACTN4O43707 AC020922.1-201ENST00000591954 3058 ntAPPRIS P1 TSL 5 BASIC20.92■□□□□ 0.94
ACTN4O43707 HOXB6-201ENST00000225648 1660 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
ACTN4O43707 CD1E-205ENST00000368160 1727 ntAPPRIS ALT2 TSL 1 (best) BASIC20.92■□□□□ 0.94
ACTN4O43707 C8orf58-207ENST00000615223 1848 ntAPPRIS ALT2 TSL 5 BASIC20.92■□□□□ 0.94
ACTN4O43707 SEC61A2-201ENST00000298428 1893 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
ACTN4O43707 ALDOC-201ENST00000226253 1982 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
ACTN4O43707 INO80E-207ENST00000563197 2103 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
ACTN4O43707 NFATC1-201ENST00000253506 4642 ntAPPRIS P3 TSL 1 (best) BASIC20.92■□□□□ 0.94
ACTN4O43707 PCCA-202ENST00000376285 2494 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
ACTN4O43707 KANSL1-202ENST00000432791 5343 ntAPPRIS P3 TSL 1 (best) BASIC20.91■□□□□ 0.94
ACTN4O43707 AC018470.1-201ENST00000624790 3129 ntBASIC20.91■□□□□ 0.94
ACTN4O43707 PHLDA1-202ENST00000602540 5741 ntAPPRIS ALT2 TSL 1 (best) BASIC20.91■□□□□ 0.94
ACTN4O43707 ATRN-201ENST00000262919 8633 ntAPPRIS P4 TSL 5 BASIC20.91■□□□□ 0.94
ACTN4O43707 ANXA3-201ENST00000264908 1657 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
ACTN4O43707 LIME1-201ENST00000309546 1178 ntAPPRIS P3 TSL 1 (best) BASIC20.91■□□□□ 0.94
ACTN4O43707 CD276-201ENST00000318424 2738 ntTSL 5 BASIC20.91■□□□□ 0.94
ACTN4O43707 PHOSPHO2-201ENST00000359744 1125 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
ACTN4O43707 DPYSL4-202ENST00000368627 1545 ntTSL 5 BASIC20.91■□□□□ 0.94
ACTN4O43707 GALE-201ENST00000374497 1488 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
ACTN4O43707 RAP1B-203ENST00000378985 1017 ntTSL 2 BASIC20.91■□□□□ 0.94
ACTN4O43707 SEMA6D-205ENST00000389425 2318 ntTSL 1 (best) BASIC20.91■□□□□ 0.94
ACTN4O43707 PPP2R2B-203ENST00000394411 2071 ntAPPRIS P1 TSL 2 BASIC20.91■□□□□ 0.94
ACTN4O43707 TRPT1-203ENST00000394547 865 ntTSL 1 (best) BASIC20.91■□□□□ 0.94
ACTN4O43707 GPM6B-204ENST00000398361 1033 ntTSL 2 BASIC20.91■□□□□ 0.94
ACTN4O43707 DCST1-204ENST00000423025 2199 ntAPPRIS ALT2 TSL 2 BASIC20.91■□□□□ 0.94
ACTN4O43707 LINC00595-207ENST00000476909 792 ntTSL 2 BASIC20.91■□□□□ 0.94
ACTN4O43707 NECTIN3-206ENST00000485303 3664 ntAPPRIS P3 TSL 1 (best) BASIC20.91■□□□□ 0.94
ACTN4O43707 OSMR-202ENST00000502536 1740 ntTSL 1 (best) BASIC20.91■□□□□ 0.94
ACTN4O43707 RAP1B-221ENST00000540209 1264 ntTSL 2 BASIC20.91■□□□□ 0.94
ACTN4O43707 BX649632.1-201ENST00000610187 819 ntTSL 3 BASIC20.91■□□□□ 0.94
ACTN4O43707 AVL9-209ENST00000640103 1367 ntTSL 5 BASIC20.91■□□□□ 0.94
ACTN4O43707 ANKRD40-201ENST00000285243 4184 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
ACTN4O43707 GUCY1A2-201ENST00000282249 3047 ntTSL 1 (best) BASIC20.91■□□□□ 0.94
ACTN4O43707 AL133373.2-201ENST00000623187 2828 ntBASIC20.91■□□□□ 0.94
ACTN4O43707 LHX8-201ENST00000294638 2373 ntAPPRIS P3 TSL 1 (best) BASIC20.9■□□□□ 0.94
ACTN4O43707 DTX2-211ENST00000446600 2281 ntTSL 2 BASIC20.9■□□□□ 0.94
ACTN4O43707 DBX1-201ENST00000524983 1380 ntAPPRIS P1 TSL 5 BASIC20.9■□□□□ 0.94
ACTN4O43707 SLC25A3-211ENST00000548847 1369 ntTSL 5 BASIC20.9■□□□□ 0.94
ACTN4O43707 ABHD13-201ENST00000375898 5338 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
ACTN4O43707 TPPP3-201ENST00000290942 1116 ntAPPRIS P1 TSL 2 BASIC20.9■□□□□ 0.94
ACTN4O43707 TMEM240-201ENST00000378733 718 ntAPPRIS P1 TSL 2 BASIC20.9■□□□□ 0.94
ACTN4O43707 TPPP3-202ENST00000393957 1058 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
Retrieved 100 of 98,524 protein–RNA pairs in 25.9 ms