Protein–RNA interactions for Protein: O43490

PROM1, Prominin-1, humanhuman

Predictions only

Length 865 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PROM1O43490 COL11A2-204ENST00000395194 1194 ntTSL 1 (best) BASIC17.71■□□□□ 0.43
PROM1O43490 AL445685.1-201ENST00000425802 762 ntTSL 3 BASIC17.71■□□□□ 0.43
PROM1O43490 OOEP-AS1-201ENST00000445350 463 ntTSL 3 BASIC17.71■□□□□ 0.43
PROM1O43490 KRT8P12-201ENST00000468527 998 ntTSL 2 BASIC17.71■□□□□ 0.43
PROM1O43490 AP003041.3-201ENST00000527151 707 ntBASIC17.71■□□□□ 0.43
PROM1O43490 NAPSB-206ENST00000562112 1266 ntBASIC17.71■□□□□ 0.43
PROM1O43490 AC215522.2-202ENST00000633163 1143 ntTSL 5 BASIC17.71■□□□□ 0.43
PROM1O43490 AC020763.4-201ENST00000623414 4170 ntBASIC17.71■□□□□ 0.43
PROM1O43490 PSMD3-201ENST00000264639 2158 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
PROM1O43490 SLC6A9-201ENST00000357730 2168 ntTSL 1 (best) BASIC17.71■□□□□ 0.43
PROM1O43490 CYTH1-209ENST00000589296 2159 ntTSL 5 BASIC17.71■□□□□ 0.43
PROM1O43490 EDEM1-201ENST00000256497 6146 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
PROM1O43490 CDH24-205ENST00000554034 2759 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
PROM1O43490 FKRP-202ENST00000391909 2801 ntAPPRIS P1 TSL 2 BASIC17.71■□□□□ 0.42
PROM1O43490 FADS1-204ENST00000433932 1690 ntTSL 2 BASIC17.71■□□□□ 0.42
PROM1O43490 HCG11-201ENST00000411553 5696 ntBASIC17.7■□□□□ 0.42
PROM1O43490 WRNIP1-202ENST00000380769 3239 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
PROM1O43490 CEP78-201ENST00000277082 2542 ntAPPRIS ALT2 TSL 2 BASIC17.7■□□□□ 0.42
PROM1O43490 DISP3-202ENST00000304391 1495 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
PROM1O43490 IL17RC-215ENST00000455057 2244 ntAPPRIS ALT2 TSL 1 (best) BASIC17.7■□□□□ 0.42
PROM1O43490 TP53I3-202ENST00000335934 1635 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
PROM1O43490 TH-205ENST00000381175 1898 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
PROM1O43490 SLC38A10-201ENST00000288439 2708 ntAPPRIS P3 TSL 1 (best) BASIC17.7■□□□□ 0.42
PROM1O43490 PTS-201ENST00000280362 935 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
PROM1O43490 CREG2-201ENST00000324768 6383 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
PROM1O43490 TRAPPC3-204ENST00000373166 1265 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
PROM1O43490 RNF144A-AS1-204ENST00000437589 618 ntTSL 2 BASIC17.7■□□□□ 0.42
PROM1O43490 AC007663.1-201ENST00000438948 1240 ntBASIC17.7■□□□□ 0.42
PROM1O43490 MCCD1P1-208ENST00000445732 328 ntBASIC17.7■□□□□ 0.42
PROM1O43490 LINC01184-202ENST00000501173 949 ntTSL 5 BASIC17.7■□□□□ 0.42
PROM1O43490 ARHGAP22-203ENST00000374172 2380 ntTSL 2 BASIC17.7■□□□□ 0.42
PROM1O43490 SLC35A3-224ENST00000640732 1777 ntTSL 5 BASIC17.7■□□□□ 0.42
PROM1O43490 TYMS-203ENST00000323274 1662 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
PROM1O43490 RREB1-201ENST00000334984 5789 ntAPPRIS ALT2 TSL 1 (best) BASIC17.7■□□□□ 0.42
PROM1O43490 WDR37-206ENST00000620998 1303 ntTSL 5 BASIC17.7■□□□□ 0.42
PROM1O43490 OSM-201ENST00000215781 1854 ntAPPRIS P3 TSL 1 (best) BASIC17.69■□□□□ 0.42
PROM1O43490 PACSIN2-203ENST00000402229 1883 ntAPPRIS P1 TSL 5 BASIC17.69■□□□□ 0.42
PROM1O43490 CTSH-201ENST00000220166 2190 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
PROM1O43490 CNIH3-201ENST00000272133 2558 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
PROM1O43490 CCK-202ENST00000396169 1527 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
PROM1O43490 ZNF211-204ENST00000347302 2472 ntAPPRIS ALT2 TSL 1 (best) BASIC17.69■□□□□ 0.42
PROM1O43490 TULP1-208ENST00000614066 2084 ntAPPRIS ALT2 TSL 5 BASIC17.69■□□□□ 0.42
PROM1O43490 MRPL53-202ENST00000409710 386 ntTSL 2 BASIC17.69■□□□□ 0.42
PROM1O43490 IKBKB-210ENST00000518983 447 ntTSL 2 BASIC17.69■□□□□ 0.42
PROM1O43490 NCAM1-AS1-201ENST00000526229 1081 ntTSL 2 BASIC17.69■□□□□ 0.42
PROM1O43490 MVB12A-204ENST00000528515 686 ntTSL 5 BASIC17.69■□□□□ 0.42
PROM1O43490 MIR4674-201ENST00000582457 87 ntBASIC17.69■□□□□ 0.42
PROM1O43490 AC027682.4-201ENST00000605277 798 ntTSL 5 BASIC17.69■□□□□ 0.42
PROM1O43490 CCDC28A-203ENST00000617445 1240 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
PROM1O43490 NOMO2-201ENST00000330537 4352 ntAPPRIS ALT2 TSL 5 BASIC17.69■□□□□ 0.42
PROM1O43490 ENTPD8-202ENST00000371506 2222 ntAPPRIS P1 TSL 5 BASIC17.69■□□□□ 0.42
PROM1O43490 CHTOP-207ENST00000614256 1840 ntTSL 3 BASIC17.69■□□□□ 0.42
PROM1O43490 LRRC36-201ENST00000329956 2395 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
PROM1O43490 NFKBIL1-201ENST00000376145 1401 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
PROM1O43490 PHKG2-202ENST00000424889 1566 ntTSL 2 BASIC17.69■□□□□ 0.42
PROM1O43490 ZBTB48-202ENST00000377674 2293 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
PROM1O43490 CLN3-204ENST00000357857 1720 ntTSL 2 BASIC17.69■□□□□ 0.42
PROM1O43490 GSTM4-201ENST00000326729 1321 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
PROM1O43490 PTN-201ENST00000348225 1614 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
PROM1O43490 AL365232.1-201ENST00000423730 1636 ntAPPRIS P1 TSL 5 BASIC17.69■□□□□ 0.42
PROM1O43490 IGLON5-201ENST00000270642 2606 ntAPPRIS P1 TSL 5 BASIC17.68■□□□□ 0.42
PROM1O43490 FAM189B-204ENST00000368368 2609 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
PROM1O43490 KRT81-201ENST00000327741 1929 ntAPPRIS P2 TSL 1 (best) BASIC17.68■□□□□ 0.42
PROM1O43490 TMEM79-203ENST00000405535 2201 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
PROM1O43490 IGFBP7-AS1-201ENST00000499667 1389 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
PROM1O43490 CDK4-202ENST00000312990 1650 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
PROM1O43490 GLYCTK-202ENST00000436784 1982 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
PROM1O43490 DGKI-202ENST00000424189 4163 ntAPPRIS ALT2 TSL 5 BASIC17.68■□□□□ 0.42
PROM1O43490 LRRC27-203ENST00000368613 2113 ntAPPRIS P3 TSL 1 (best) BASIC17.68■□□□□ 0.42
PROM1O43490 FAM46A-203ENST00000369756 5537 ntAPPRIS ALT2 TSL 1 (best) BASIC17.68■□□□□ 0.42
PROM1O43490 ADARB1-201ENST00000348831 6882 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
PROM1O43490 SEPT8-201ENST00000296873 4394 ntAPPRIS P2 TSL 1 (best) BASIC17.68■□□□□ 0.42
PROM1O43490 ATP5L-201ENST00000300688 1577 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
PROM1O43490 P2RY6-201ENST00000349767 1700 ntAPPRIS P1 TSL 2 BASIC17.68■□□□□ 0.42
PROM1O43490 INGX-201ENST00000359239 846 ntBASIC17.68■□□□□ 0.42
PROM1O43490 ENSA-205ENST00000361532 792 ntTSL 2 BASIC17.68■□□□□ 0.42
PROM1O43490 TNNT3-206ENST00000381579 1042 ntAPPRIS ALT2 TSL 1 (best) BASIC17.68■□□□□ 0.42
PROM1O43490 DOLPP1-203ENST00000406974 2037 ntTSL 2 BASIC17.68■□□□□ 0.42
PROM1O43490 HYAL3-203ENST00000415204 959 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
PROM1O43490 BAIAP2-203ENST00000416299 1442 ntTSL 2 BASIC17.68■□□□□ 0.42
PROM1O43490 FARSA-202ENST00000423140 1720 ntTSL 2 BASIC17.68■□□□□ 0.42
PROM1O43490 AC012618.3-203ENST00000426044 917 ntTSL 2 BASIC17.68■□□□□ 0.42
PROM1O43490 AL954642.1-201ENST00000428088 538 ntTSL 3 BASIC17.68■□□□□ 0.42
PROM1O43490 SPATA6L-207ENST00000475086 1444 ntAPPRIS P1 TSL 2 BASIC17.68■□□□□ 0.42
PROM1O43490 STXBP1-203ENST00000476182 566 ntTSL 5 BASIC17.68■□□□□ 0.42
PROM1O43490 TMEM110-MUSTN1-202ENST00000504329 1405 ntAPPRIS P1 TSL 5 BASIC17.68■□□□□ 0.42
PROM1O43490 AC010653.2-201ENST00000623505 997 ntBASIC17.68■□□□□ 0.42
PROM1O43490 TNPO2-203ENST00000450764 4993 ntAPPRIS ALT1 TSL 1 (best) BASIC17.68■□□□□ 0.42
PROM1O43490 FAM213A-206ENST00000615554 2213 ntAPPRIS P1 TSL 5 BASIC17.68■□□□□ 0.42
PROM1O43490 TSGA10IP-203ENST00000532620 1925 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
PROM1O43490 GUCA1A-205ENST00000541991 1921 ntTSL 5 BASIC17.68■□□□□ 0.42
PROM1O43490 SIGLEC10-204ENST00000436984 1776 ntTSL 2 BASIC17.68■□□□□ 0.42
PROM1O43490 ZNF655-202ENST00000320583 1601 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
PROM1O43490 NUDT17-201ENST00000334513 1473 ntAPPRIS P1 TSL 5 BASIC17.68■□□□□ 0.42
PROM1O43490 DHRS11-210ENST00000611337 1341 ntTSL 5 BASIC17.68■□□□□ 0.42
PROM1O43490 IRF5-202ENST00000357234 1680 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
PROM1O43490 AZIN1-201ENST00000337198 4721 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
PROM1O43490 ARRB1-201ENST00000360025 1895 ntAPPRIS P3 TSL 1 (best) BASIC17.67■□□□□ 0.42
PROM1O43490 CBFA2T2-201ENST00000342704 2864 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
PROM1O43490 TFCP2-205ENST00000549867 1727 ntTSL 5 BASIC17.67■□□□□ 0.42
Retrieved 100 of 98,524 protein–RNA pairs in 40.3 ms