Protein–RNA interactions for Protein: O15269

SPTLC1, Serine palmitoyltransferase 1, humanhuman

Predictions only

Length 473 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SPTLC1O15269 ESPN-205ENST00000461727 1869 ntTSL 1 (best) BASIC19.96■□□□□ 0.79
SPTLC1O15269 EHBP1-209ENST00000431489 5076 ntAPPRIS ALT2 TSL 1 (best) BASIC19.96■□□□□ 0.79
SPTLC1O15269 SLC35G2-202ENST00000446465 2060 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
SPTLC1O15269 ALDH3B1-206ENST00000615463 1300 ntTSL 1 (best) BASIC19.96■□□□□ 0.79
SPTLC1O15269 PITX2-201ENST00000306732 2320 ntAPPRIS P4 TSL 1 (best) BASIC19.96■□□□□ 0.79
SPTLC1O15269 MFSD1-201ENST00000264266 1594 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
SPTLC1O15269 ACVR1B-205ENST00000541224 1791 ntTSL 2 BASIC19.95■□□□□ 0.78
SPTLC1O15269 Z98044.1-201ENST00000632503 1764 ntBASIC19.95■□□□□ 0.78
SPTLC1O15269 LRRC1-202ENST00000370888 3180 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
SPTLC1O15269 GLS-201ENST00000320717 4834 ntAPPRIS P3 TSL 1 (best) BASIC19.95■□□□□ 0.78
SPTLC1O15269 LYSMD4-210ENST00000545021 2431 ntTSL 4 BASIC19.95■□□□□ 0.78
SPTLC1O15269 FAM57A-201ENST00000301324 2013 ntTSL 1 (best) BASIC19.95■□□□□ 0.78
SPTLC1O15269 PGAM1-201ENST00000334828 1830 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
SPTLC1O15269 DMRT2-201ENST00000259622 2459 ntTSL 2 BASIC19.95■□□□□ 0.78
SPTLC1O15269 NFKBIZ-201ENST00000326151 2058 ntTSL 2 BASIC19.95■□□□□ 0.78
SPTLC1O15269 ZNF281-202ENST00000367352 2933 ntAPPRIS ALT2 TSL 2 BASIC19.95■□□□□ 0.78
SPTLC1O15269 LYPD3-201ENST00000244333 1694 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
SPTLC1O15269 EEF1AKMT2-201ENST00000368836 1462 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
SPTLC1O15269 AGTRAP-201ENST00000314340 1107 ntAPPRIS P3 TSL 1 (best) BASIC19.95■□□□□ 0.78
SPTLC1O15269 BET1L-202ENST00000332865 533 ntTSL 5 BASIC19.95■□□□□ 0.78
SPTLC1O15269 UNG-202ENST00000336865 2130 ntAPPRIS ALT2 TSL 1 (best) BASIC19.95■□□□□ 0.78
SPTLC1O15269 SPATA22-202ENST00000355380 1216 ntTSL 1 (best) BASIC19.95■□□□□ 0.78
SPTLC1O15269 AC004540.1-201ENST00000439120 891 ntTSL 2 BASIC19.95■□□□□ 0.78
SPTLC1O15269 AC005091.1-201ENST00000441955 1190 ntTSL 3 BASIC19.95■□□□□ 0.78
SPTLC1O15269 KLHL21-204ENST00000467612 1056 ntTSL 3 BASIC19.95■□□□□ 0.78
SPTLC1O15269 AC004080.2-201ENST00000523331 556 ntTSL 4 BASIC19.95■□□□□ 0.78
SPTLC1O15269 C14orf144-201ENST00000553757 537 ntTSL 4 BASIC19.95■□□□□ 0.78
SPTLC1O15269 AC015961.2-201ENST00000589281 701 ntTSL 3 BASIC19.95■□□□□ 0.78
SPTLC1O15269 RPARP-AS1-206ENST00000596366 631 ntTSL 3 BASIC19.95■□□□□ 0.78
SPTLC1O15269 AC004076.1-201ENST00000596831 664 ntAPPRIS P1 TSL 2 BASIC19.95■□□□□ 0.78
SPTLC1O15269 AC079602.3-201ENST00000623931 403 ntBASIC19.95■□□□□ 0.78
SPTLC1O15269 ABI3-202ENST00000419580 1718 ntAPPRIS P1 TSL 5 BASIC19.95■□□□□ 0.78
SPTLC1O15269 SEPT6-202ENST00000354228 1576 ntAPPRIS P4 TSL 1 (best) BASIC19.95■□□□□ 0.78
SPTLC1O15269 YY1AP1-213ENST00000405763 2011 ntAPPRIS ALT2 TSL 1 (best) BASIC19.95■□□□□ 0.78
SPTLC1O15269 CACNA1I-204ENST00000407673 5952 ntAPPRIS ALT2 TSL 1 (best) BASIC19.95■□□□□ 0.78
SPTLC1O15269 AC034236.2-201ENST00000606662 1610 ntBASIC19.94■□□□□ 0.78
SPTLC1O15269 CPZ-201ENST00000315782 2136 ntAPPRIS P3 TSL 1 (best) BASIC19.94■□□□□ 0.78
SPTLC1O15269 VBP1-201ENST00000286428 1686 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
SPTLC1O15269 C1orf198-201ENST00000366663 3858 ntAPPRIS P3 TSL 1 (best) BASIC19.94■□□□□ 0.78
SPTLC1O15269 CDC14B-203ENST00000375242 2965 ntTSL 2 BASIC19.94■□□□□ 0.78
SPTLC1O15269 SOCS2-201ENST00000340600 2761 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
SPTLC1O15269 TEPSIN-213ENST00000637944 1782 ntAPPRIS ALT2 TSL 5 BASIC19.94■□□□□ 0.78
SPTLC1O15269 COPE-201ENST00000262812 1141 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
SPTLC1O15269 NDUFA12-201ENST00000327772 635 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
SPTLC1O15269 AC008825.1-201ENST00000504398 452 ntTSL 3 BASIC19.94■□□□□ 0.78
SPTLC1O15269 AC127526.4-201ENST00000527970 983 ntTSL 3 BASIC19.94■□□□□ 0.78
SPTLC1O15269 CD320-202ENST00000537716 1119 ntTSL 2 BASIC19.94■□□□□ 0.78
SPTLC1O15269 MIR3917-201ENST00000580971 93 ntBASIC19.94■□□□□ 0.78
SPTLC1O15269 RNASET2-213ENST00000611959 1124 ntTSL 5 BASIC19.94■□□□□ 0.78
SPTLC1O15269 AL121956.5-201ENST00000625261 221 ntBASIC19.94■□□□□ 0.78
SPTLC1O15269 PGM1-205ENST00000540265 2345 ntTSL 2 BASIC19.94■□□□□ 0.78
SPTLC1O15269 EDNRA-206ENST00000511804 1569 ntTSL 2 BASIC19.94■□□□□ 0.78
SPTLC1O15269 RAB11FIP5-201ENST00000258098 4342 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
SPTLC1O15269 BSCL2-201ENST00000278893 1364 ntAPPRIS ALT2 TSL 2 BASIC19.94■□□□□ 0.78
SPTLC1O15269 SSX2IP-210ENST00000605755 1933 ntTSL 2 BASIC19.94■□□□□ 0.78
SPTLC1O15269 CD55-201ENST00000314754 2220 ntAPPRIS ALT2 TSL 1 (best) BASIC19.94■□□□□ 0.78
SPTLC1O15269 LINC01311-201ENST00000565162 1445 ntBASIC19.93■□□□□ 0.78
SPTLC1O15269 SLC25A47-201ENST00000361529 1738 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
SPTLC1O15269 REEP2-201ENST00000254901 2099 ntAPPRIS P3 TSL 1 (best) BASIC19.93■□□□□ 0.78
SPTLC1O15269 EDC3-214ENST00000568176 1825 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
SPTLC1O15269 FAM3A-204ENST00000369643 1521 ntAPPRIS P1 TSL 2 BASIC19.93■□□□□ 0.78
SPTLC1O15269 ADAMTS10-205ENST00000595838 2458 ntTSL 2 BASIC19.93■□□□□ 0.78
SPTLC1O15269 ISLR2-204ENST00000453268 2812 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
SPTLC1O15269 NHLH2-201ENST00000320238 2512 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
SPTLC1O15269 HBZP1-201ENST00000354915 429 ntBASIC19.93■□□□□ 0.78
SPTLC1O15269 CLN3-202ENST00000355477 1173 ntTSL 1 (best) BASIC19.93■□□□□ 0.78
SPTLC1O15269 CHTOP-202ENST00000368687 1094 ntTSL 1 (best) BASIC19.93■□□□□ 0.78
SPTLC1O15269 IPPK-202ENST00000375522 882 ntTSL 3 BASIC19.93■□□□□ 0.78
SPTLC1O15269 AL450487.1-201ENST00000426799 995 ntBASIC19.93■□□□□ 0.78
SPTLC1O15269 AGBL5-AS1-201ENST00000444217 407 ntTSL 5 BASIC19.93■□□□□ 0.78
SPTLC1O15269 CHCHD3-203ENST00000448878 1038 ntTSL 5 BASIC19.93■□□□□ 0.78
SPTLC1O15269 DGUOK-AS1-203ENST00000453103 601 ntTSL 3 BASIC19.93■□□□□ 0.78
SPTLC1O15269 PP7080-204ENST00000510714 601 ntTSL 3 BASIC19.93■□□□□ 0.78
SPTLC1O15269 LY6E-213ENST00000522528 606 ntTSL 3 BASIC19.93■□□□□ 0.78
SPTLC1O15269 AC104390.1-201ENST00000555663 520 ntBASIC19.93■□□□□ 0.78
SPTLC1O15269 FGF14-AS2-201ENST00000606448 1074 ntBASIC19.93■□□□□ 0.78
SPTLC1O15269 NDUFAB1-201ENST00000007516 717 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
SPTLC1O15269 MAP3K7CL-206ENST00000399928 1904 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
SPTLC1O15269 CYP21A2-222ENST00000435122 1914 ntTSL 2 BASIC19.93■□□□□ 0.78
SPTLC1O15269 PFDN6-206ENST00000463584 1915 ntTSL 3 BASIC19.93■□□□□ 0.78
SPTLC1O15269 AGAP3-202ENST00000397238 3225 ntAPPRIS P2 TSL 1 (best) BASIC19.93■□□□□ 0.78
SPTLC1O15269 CACNG5-202ENST00000533854 1311 ntAPPRIS P1 TSL 2 BASIC19.93■□□□□ 0.78
SPTLC1O15269 PFKFB3-219ENST00000640683 2311 ntTSL 5 BASIC19.93■□□□□ 0.78
SPTLC1O15269 RBFOX1-204ENST00000422070 1684 ntTSL 2 BASIC19.93■□□□□ 0.78
SPTLC1O15269 ACBD5-201ENST00000375888 1747 ntAPPRIS ALT2 TSL 5 BASIC19.93■□□□□ 0.78
SPTLC1O15269 PCDHGB3-202ENST00000618934 2445 ntAPPRIS P1 BASIC19.93■□□□□ 0.78
SPTLC1O15269 TAPT1-201ENST00000405303 4591 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
SPTLC1O15269 AIPL1-209ENST00000575265 2111 ntAPPRIS ALT2 TSL 1 (best) BASIC19.93■□□□□ 0.78
SPTLC1O15269 ANKMY1-209ENST00000405523 1827 ntTSL 1 (best) BASIC19.92■□□□□ 0.78
SPTLC1O15269 GHDC-212ENST00000593209 1827 ntTSL 5 BASIC19.92■□□□□ 0.78
SPTLC1O15269 UTP18-201ENST00000225298 1894 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
SPTLC1O15269 RNF135-201ENST00000324689 1905 ntTSL 1 (best) BASIC19.92■□□□□ 0.78
SPTLC1O15269 RIMBP3-201ENST00000619918 6105 ntAPPRIS P1 BASIC19.92■□□□□ 0.78
SPTLC1O15269 SNAI3-AS1-205ENST00000568633 2096 ntBASIC19.92■□□□□ 0.78
SPTLC1O15269 SEPT9-236ENST00000591088 1691 ntAPPRIS ALT2 TSL 2 BASIC19.92■□□□□ 0.78
SPTLC1O15269 ISCA1-202ENST00000326094 1264 ntTSL 3 BASIC19.92■□□□□ 0.78
SPTLC1O15269 GPX4-201ENST00000354171 919 ntAPPRIS P2 TSL 1 (best) BASIC19.92■□□□□ 0.78
SPTLC1O15269 LINC00421-201ENST00000413833 1054 ntTSL 1 (best) BASIC19.92■□□□□ 0.78
SPTLC1O15269 CUTA-210ENST00000488034 769 ntAPPRIS ALT1 TSL 2 BASIC19.92■□□□□ 0.78
SPTLC1O15269 LCN10-205ENST00000497771 723 ntAPPRIS P2 TSL 1 (best) BASIC19.92■□□□□ 0.78
Retrieved 100 of 98,524 protein–RNA pairs in 37.7 ms