Protein–RNA interactions for Protein: O15212

PFDN6, Prefoldin subunit 6, humanhuman

Predictions only

Length 129 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PFDN6O15212 PCCB-208ENST00000468777 1877 ntAPPRIS ALT2 TSL 3 BASIC18.71■□□□□ 0.59
PFDN6O15212 ZSWIM8-213ENST00000603114 5919 ntTSL 5 BASIC18.71■□□□□ 0.59
PFDN6O15212 CBFA2T2-201ENST00000342704 2864 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
PFDN6O15212 CYTH1-209ENST00000589296 2159 ntTSL 5 BASIC18.71■□□□□ 0.59
PFDN6O15212 C14orf180-201ENST00000331952 1455 ntAPPRIS ALT2 TSL 2 BASIC18.71■□□□□ 0.59
PFDN6O15212 FAM118A-202ENST00000405673 1612 ntTSL 5 BASIC18.71■□□□□ 0.58
PFDN6O15212 AP2M1-201ENST00000292807 1931 ntAPPRIS P4 TSL 5 BASIC18.7■□□□□ 0.58
PFDN6O15212 KDSR-202ENST00000406396 5447 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
PFDN6O15212 CASKIN2-201ENST00000321617 5015 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
PFDN6O15212 AP5S1-203ENST00000379573 1848 ntTSL 1 (best) BASIC18.7■□□□□ 0.58
PFDN6O15212 TCP11-209ENST00000444780 1841 ntAPPRIS ALT2 TSL 2 BASIC18.7■□□□□ 0.58
PFDN6O15212 PHOSPHO2-201ENST00000359744 1125 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
PFDN6O15212 CCDC74B-204ENST00000409234 871 ntAPPRIS ALT2 TSL 1 (best) BASIC18.7■□□□□ 0.58
PFDN6O15212 MFAP1P1-201ENST00000442257 1255 ntBASIC18.7■□□□□ 0.58
PFDN6O15212 ACAA1-209ENST00000450296 1570 ntTSL 5 BASIC18.7■□□□□ 0.58
PFDN6O15212 CA15P1-201ENST00000481698 905 ntBASIC18.7■□□□□ 0.58
PFDN6O15212 AC008550.1-201ENST00000511500 884 ntBASIC18.7■□□□□ 0.58
PFDN6O15212 AL031600.3-201ENST00000566287 1124 ntTSL 5 BASIC18.7■□□□□ 0.58
PFDN6O15212 TGIF1-222ENST00000577543 729 ntTSL 3 BASIC18.7■□□□□ 0.58
PFDN6O15212 MIR4785-201ENST00000585005 73 ntBASIC18.7■□□□□ 0.58
PFDN6O15212 FGF13-208ENST00000626909 1039 ntTSL 2 BASIC18.7■□□□□ 0.58
PFDN6O15212 AC068587.9-201ENST00000641814 219 ntBASIC18.7■□□□□ 0.58
PFDN6O15212 SYNPO-201ENST00000307662 5374 ntAPPRIS P3 TSL 1 (best) BASIC18.7■□□□□ 0.58
PFDN6O15212 ZNF839-202ENST00000442396 2987 ntAPPRIS P3 TSL 5 BASIC18.7■□□□□ 0.58
PFDN6O15212 CPNE7-201ENST00000268720 2657 ntTSL 1 (best) BASIC18.7■□□□□ 0.58
PFDN6O15212 HBEGF-201ENST00000230990 2386 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
PFDN6O15212 GJA4-201ENST00000342280 1622 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
PFDN6O15212 KLC1-217ENST00000554280 2426 ntTSL 5 BASIC18.7■□□□□ 0.58
PFDN6O15212 KRT8-217ENST00000619952 2437 ntTSL 2 BASIC18.7■□□□□ 0.58
PFDN6O15212 CD8A-202ENST00000352580 1977 ntAPPRIS ALT2 TSL 2 BASIC18.7■□□□□ 0.58
PFDN6O15212 PCDH7-201ENST00000361762 6403 ntAPPRIS P3 TSL 1 (best) BASIC18.7■□□□□ 0.58
PFDN6O15212 C19orf25-203ENST00000585675 1837 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
PFDN6O15212 KRT81-202ENST00000615839 1505 ntAPPRIS ALT2 TSL 5 BASIC18.69■□□□□ 0.58
PFDN6O15212 PODXL2-201ENST00000342480 2186 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
PFDN6O15212 CRYBB2P1-202ENST00000382734 1364 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
PFDN6O15212 DDX42-216ENST00000583590 4148 ntAPPRIS P1 TSL 5 BASIC18.69■□□□□ 0.58
PFDN6O15212 ENOPH1-201ENST00000273920 2025 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
PFDN6O15212 NECTIN3-211ENST00000493615 1876 ntAPPRIS ALT2 TSL 2 BASIC18.69■□□□□ 0.58
PFDN6O15212 AC096719.1-201ENST00000510705 1874 ntTSL 5 BASIC18.69■□□□□ 0.58
PFDN6O15212 CASC2-205ENST00000454781 2216 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
PFDN6O15212 FAM213A-206ENST00000615554 2213 ntAPPRIS P1 TSL 5 BASIC18.69■□□□□ 0.58
PFDN6O15212 TEAD2-202ENST00000377214 2440 ntAPPRIS ALT1 TSL 2 BASIC18.69■□□□□ 0.58
PFDN6O15212 C6orf223-202ENST00000439969 2757 ntTSL 2 BASIC18.69■□□□□ 0.58
PFDN6O15212 SCARB2-223ENST00000640640 4608 ntTSL 5 BASIC18.69■□□□□ 0.58
PFDN6O15212 MINDY2-202ENST00000450403 4820 ntAPPRIS ALT2 TSL 1 (best) BASIC18.69■□□□□ 0.58
PFDN6O15212 EMC6-201ENST00000248378 653 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
PFDN6O15212 RAP1B-203ENST00000378985 1017 ntTSL 2 BASIC18.69■□□□□ 0.58
PFDN6O15212 POMC-202ENST00000380794 1295 ntAPPRIS P1 TSL 2 BASIC18.69■□□□□ 0.58
PFDN6O15212 UBB-203ENST00000395839 1012 ntAPPRIS P1 TSL 2 BASIC18.69■□□□□ 0.58
PFDN6O15212 USP46-AS1-201ENST00000503051 1048 ntTSL 3 BASIC18.69■□□□□ 0.58
PFDN6O15212 COX6C-208ENST00000522940 694 ntAPPRIS P1 TSL 3 BASIC18.69■□□□□ 0.58
PFDN6O15212 RAP1B-221ENST00000540209 1264 ntTSL 2 BASIC18.69■□□□□ 0.58
PFDN6O15212 SIVA1-207ENST00000556195 674 ntTSL 3 BASIC18.69■□□□□ 0.58
PFDN6O15212 TNFRSF19-202ENST00000382258 1625 ntAPPRIS P4 TSL 1 (best) BASIC18.69■□□□□ 0.58
PFDN6O15212 TMPRSS5-205ENST00000538955 1956 ntAPPRIS ALT2 TSL 1 (best) BASIC18.69■□□□□ 0.58
PFDN6O15212 HSDL1-202ENST00000434463 1493 ntTSL 2 BASIC18.69■□□□□ 0.58
PFDN6O15212 TYMS-203ENST00000323274 1662 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
PFDN6O15212 GTF2H4-202ENST00000376316 1673 ntAPPRIS P1 TSL 5 BASIC18.69■□□□□ 0.58
PFDN6O15212 ZNF280D-205ENST00000559000 4726 ntAPPRIS ALT2 TSL 2 BASIC18.69■□□□□ 0.58
PFDN6O15212 KRT24-201ENST00000264651 1881 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
PFDN6O15212 FAM198A-202ENST00000430121 3121 ntAPPRIS P2 TSL 5 BASIC18.69■□□□□ 0.58
PFDN6O15212 ETV4-201ENST00000319349 2429 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
PFDN6O15212 RNF217-211ENST00000560949 5145 ntAPPRIS ALT2 TSL 5 BASIC18.69■□□□□ 0.58
PFDN6O15212 AHSA2-202ENST00000394457 6574 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
PFDN6O15212 RFTN1-201ENST00000334133 2982 ntAPPRIS P2 TSL 1 (best) BASIC18.69■□□□□ 0.58
PFDN6O15212 KLHL23-201ENST00000272797 2087 ntAPPRIS P1 TSL 2 BASIC18.69■□□□□ 0.58
PFDN6O15212 RABEP1-202ENST00000537505 5365 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
PFDN6O15212 APIP-201ENST00000395787 1366 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
PFDN6O15212 CPZ-201ENST00000315782 2136 ntAPPRIS P3 TSL 1 (best) BASIC18.68■□□□□ 0.58
PFDN6O15212 CCDC34-201ENST00000317945 2109 ntAPPRIS P3 TSL 1 (best) BASIC18.68■□□□□ 0.58
PFDN6O15212 C19orf25-201ENST00000427685 1410 ntTSL 2 BASIC18.68■□□□□ 0.58
PFDN6O15212 PTN-201ENST00000348225 1614 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
PFDN6O15212 CASD1-201ENST00000297273 3942 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
PFDN6O15212 POLR2D-202ENST00000409698 806 ntTSL 2 BASIC18.68■□□□□ 0.58
PFDN6O15212 OVCH1-AS1-203ENST00000551108 963 ntTSL 2 BASIC18.68■□□□□ 0.58
PFDN6O15212 AC089999.2-201ENST00000552525 248 ntTSL 3 BASIC18.68■□□□□ 0.58
PFDN6O15212 AC008649.1-201ENST00000589557 516 ntTSL 2 BASIC18.68■□□□□ 0.58
PFDN6O15212 PNMA8A-203ENST00000602246 572 ntAPPRIS ALT2 TSL 4 BASIC18.68■□□□□ 0.58
PFDN6O15212 Z99916.2-201ENST00000604037 246 ntBASIC18.68■□□□□ 0.58
PFDN6O15212 REXO1L10P-201ENST00000615707 1290 ntBASIC18.68■□□□□ 0.58
PFDN6O15212 ADORA1-208ENST00000618295 862 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
PFDN6O15212 REXO1L12P-201ENST00000622156 912 ntBASIC18.68■□□□□ 0.58
PFDN6O15212 STK25-201ENST00000316586 4619 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
PFDN6O15212 MAPT-205ENST00000351559 5811 ntAPPRIS ALT2 TSL 1 (best) BASIC18.68■□□□□ 0.58
PFDN6O15212 RGS3-231ENST00000613049 1726 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
PFDN6O15212 ELF3-201ENST00000359651 4994 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
PFDN6O15212 RBP4-202ENST00000371467 1314 ntAPPRIS P1 TSL 5 BASIC18.68■□□□□ 0.58
PFDN6O15212 CASP16P-202ENST00000575497 2161 ntTSL 2 BASIC18.68■□□□□ 0.58
PFDN6O15212 RAX2-201ENST00000555633 2414 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
PFDN6O15212 ZBTB4-202ENST00000380599 5866 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
PFDN6O15212 GHDC-212ENST00000593209 1827 ntTSL 5 BASIC18.67■□□□□ 0.58
PFDN6O15212 GRK6-201ENST00000355472 2939 ntAPPRIS P3 TSL 1 (best) BASIC18.67■□□□□ 0.58
PFDN6O15212 CNOT9-209ENST00000627282 1621 ntTSL 2 BASIC18.67■□□□□ 0.58
PFDN6O15212 ENPP1-201ENST00000360971 7442 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
PFDN6O15212 ETS1-207ENST00000531611 2134 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
PFDN6O15212 ADPGK-201ENST00000311669 2557 ntAPPRIS P1 TSL 2 BASIC18.67■□□□□ 0.58
PFDN6O15212 GALE-201ENST00000374497 1488 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
PFDN6O15212 SLC6A9-201ENST00000357730 2168 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
PFDN6O15212 UNC93B2-201ENST00000285383 730 ntBASIC18.67■□□□□ 0.58
PFDN6O15212 FUOM-203ENST00000368552 762 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
Retrieved 100 of 98,524 protein–RNA pairs in 28.4 ms