Protein–RNA interactions for Protein: O14521

SDHD, Succinate dehydrogenase [ubiquinone] cytochrome b small subunit, mitochondrial, humanhuman

Predictions only

Length 159 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SDHDO14521 TMEM198-201ENST00000344458 2393 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
SDHDO14521 ACOXL-205ENST00000439055 2373 ntTSL 2 BASIC18.05■□□□□ 0.48
SDHDO14521 RGS20-203ENST00000344277 1667 ntTSL 1 (best) BASIC18.05■□□□□ 0.48
SDHDO14521 AC124066.1-201ENST00000581122 1660 ntTSL 5 BASIC18.05■□□□□ 0.48
SDHDO14521 POR-209ENST00000439269 1858 ntTSL 2 BASIC18.05■□□□□ 0.48
SDHDO14521 WISP2-201ENST00000190983 1403 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
SDHDO14521 MEF2B-204ENST00000424583 1405 ntAPPRIS P1 TSL 5 BASIC18.05■□□□□ 0.48
SDHDO14521 GJA4-201ENST00000342280 1622 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
SDHDO14521 HAUS4-218ENST00000555986 1626 ntTSL 5 BASIC18.05■□□□□ 0.48
SDHDO14521 RILPL2-201ENST00000280571 6141 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
SDHDO14521 SSC5D-201ENST00000389623 4845 ntAPPRIS P3 TSL 1 (best) BASIC18.05■□□□□ 0.48
SDHDO14521 THOC6-209ENST00000575576 1360 ntTSL 5 BASIC18.04■□□□□ 0.48
SDHDO14521 MOAP1-201ENST00000298894 2441 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
SDHDO14521 ZNF22-201ENST00000298299 2551 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
SDHDO14521 UCHL5-202ENST00000367449 1507 ntAPPRIS ALT1 TSL 1 (best) BASIC18.04■□□□□ 0.48
SDHDO14521 PABPC1L-217ENST00000537323 1910 ntTSL 1 (best) BASIC18.04■□□□□ 0.48
SDHDO14521 ZBTB16-201ENST00000335953 2523 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
SDHDO14521 MSANTD1-201ENST00000438480 2922 ntAPPRIS P3 TSL 5 BASIC18.04■□□□□ 0.48
SDHDO14521 NEXN-AS1-201ENST00000421331 2292 ntTSL 2 BASIC18.04■□□□□ 0.48
SDHDO14521 GNAS-203ENST00000306120 1878 ntBASIC18.04■□□□□ 0.48
SDHDO14521 ANXA3-201ENST00000264908 1657 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
SDHDO14521 SETMAR-206ENST00000430981 1671 ntTSL 1 (best) BASIC18.04■□□□□ 0.48
SDHDO14521 PNKP-207ENST00000596014 1665 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
SDHDO14521 TSTD1-201ENST00000318289 626 ntAPPRIS P3 TSL 1 (best) BASIC18.04■□□□□ 0.48
SDHDO14521 HAGH-201ENST00000397353 1257 ntAPPRIS ALT1 TSL 5 BASIC18.04■□□□□ 0.48
SDHDO14521 METTL21A-204ENST00000425132 869 ntTSL 2 BASIC18.04■□□□□ 0.48
SDHDO14521 NME6-209ENST00000442597 757 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
SDHDO14521 LINC01881-205ENST00000456398 1235 ntTSL 5 BASIC18.04■□□□□ 0.48
SDHDO14521 MFSD4A-206ENST00000489709 1136 ntTSL 5 BASIC18.04■□□□□ 0.48
SDHDO14521 SCARA5-203ENST00000518030 1074 ntTSL 1 (best) BASIC18.04■□□□□ 0.48
SDHDO14521 BAALC-AS1-206ENST00000521383 736 ntTSL 3 BASIC18.04■□□□□ 0.48
SDHDO14521 CMTM3-207ENST00000564060 824 ntTSL 2 BASIC18.04■□□□□ 0.48
SDHDO14521 CMTM3-211ENST00000565922 615 ntTSL 1 (best) BASIC18.04■□□□□ 0.48
SDHDO14521 AC018445.1-201ENST00000621571 568 ntTSL 4 BASIC18.04■□□□□ 0.48
SDHDO14521 CORO1B-210ENST00000627576 960 ntTSL 5 BASIC18.04■□□□□ 0.48
SDHDO14521 SLX1B-SULT1A4-201ENST00000344620 2424 ntTSL 2 BASIC18.04■□□□□ 0.48
SDHDO14521 SH2D3C-203ENST00000373277 2750 ntAPPRIS ALT2 TSL 1 (best) BASIC18.04■□□□□ 0.48
SDHDO14521 DNAJC8-201ENST00000263697 1759 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
SDHDO14521 AHRR-209ENST00000512529 1912 ntTSL 5 BASIC18.04■□□□□ 0.48
SDHDO14521 PCDHA8-201ENST00000378123 2616 ntAPPRIS ALT2 BASIC18.03■□□□□ 0.48
SDHDO14521 ATRIP-203ENST00000357105 2403 ntTSL 2 BASIC18.03■□□□□ 0.48
SDHDO14521 FAM53A-207ENST00000489363 2776 ntTSL 2 BASIC18.03■□□□□ 0.48
SDHDO14521 PCCB-208ENST00000468777 1877 ntAPPRIS ALT2 TSL 3 BASIC18.03■□□□□ 0.48
SDHDO14521 DDX31-206ENST00000480876 1333 ntTSL 1 (best) BASIC18.03■□□□□ 0.48
SDHDO14521 SCYL1-202ENST00000279270 1659 ntTSL 5 BASIC18.03■□□□□ 0.48
SDHDO14521 TUBGCP3-202ENST00000375669 2723 ntTSL 1 (best) BASIC18.03■□□□□ 0.48
SDHDO14521 KMT5A-201ENST00000330479 3069 ntAPPRIS ALT2 TSL 1 (best) BASIC18.03■□□□□ 0.48
SDHDO14521 HDAC10-201ENST00000216271 2687 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
SDHDO14521 PTPMT1-202ENST00000326674 768 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
SDHDO14521 SLC25A6P5-201ENST00000435663 894 ntBASIC18.03■□□□□ 0.48
SDHDO14521 THAP6-213ENST00000514480 1161 ntAPPRIS P3 TSL 1 (best) BASIC18.03■□□□□ 0.48
SDHDO14521 B3GAT3-205ENST00000534026 1120 ntTSL 2 BASIC18.03■□□□□ 0.48
SDHDO14521 C14orf28-204ENST00000557112 1097 ntTSL 5 BASIC18.03■□□□□ 0.48
SDHDO14521 AC069544.1-201ENST00000609399 999 ntBASIC18.03■□□□□ 0.48
SDHDO14521 ZSWIM4-201ENST00000254323 4339 ntAPPRIS P1 TSL 2 BASIC18.03■□□□□ 0.48
SDHDO14521 GPR83-202ENST00000539203 1909 ntTSL 5 BASIC18.03■□□□□ 0.48
SDHDO14521 SEMA6C-210ENST00000621728 1918 ntTSL 1 (best) BASIC18.03■□□□□ 0.48
SDHDO14521 GTF2IRD2-207ENST00000625377 1910 ntTSL 5 BASIC18.03■□□□□ 0.48
SDHDO14521 PODN-203ENST00000395871 2744 ntTSL 5 BASIC18.03■□□□□ 0.48
SDHDO14521 SEC61A2-201ENST00000298428 1893 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
SDHDO14521 ISG20-201ENST00000306072 1856 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
SDHDO14521 CSF1-203ENST00000369801 1364 ntTSL 1 (best) BASIC18.03■□□□□ 0.48
SDHDO14521 JAKMIP1-208ENST00000637373 1362 ntTSL 5 BASIC18.03■□□□□ 0.48
SDHDO14521 AP001273.2-201ENST00000638767 2993 ntAPPRIS P1 TSL 5 BASIC18.03■□□□□ 0.48
SDHDO14521 MRPS2-201ENST00000241600 1510 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
SDHDO14521 MYH7B-201ENST00000262873 6293 ntAPPRIS P2 TSL 1 (best) BASIC18.02■□□□□ 0.48
SDHDO14521 BTG3-201ENST00000339775 1485 ntTSL 1 (best) BASIC18.02■□□□□ 0.48
SDHDO14521 AC010173.1-201ENST00000549023 1453 ntTSL 2 BASIC18.02■□□□□ 0.48
SDHDO14521 CIRBP-202ENST00000413636 1606 ntTSL 2 BASIC18.02■□□□□ 0.48
SDHDO14521 RIOX2-201ENST00000333396 5347 ntAPPRIS ALT1 TSL 1 (best) BASIC18.02■□□□□ 0.48
SDHDO14521 ASB13-201ENST00000357700 2699 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
SDHDO14521 ADCY5-202ENST00000462833 7311 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
SDHDO14521 DBN1-201ENST00000292385 3072 ntAPPRIS P4 TSL 1 (best) BASIC18.02■□□□□ 0.48
SDHDO14521 C5orf56-203ENST00000378953 942 ntAPPRIS ALT2 TSL 2 BASIC18.02■□□□□ 0.48
SDHDO14521 TSLP-203ENST00000420978 2621 ntAPPRIS ALT2 TSL 1 (best) BASIC18.02■□□□□ 0.48
SDHDO14521 MROH1-202ENST00000423230 1712 ntTSL 1 (best) BASIC18.02■□□□□ 0.48
SDHDO14521 AC092171.1-201ENST00000455866 753 ntTSL 2 BASIC18.02■□□□□ 0.48
SDHDO14521 FAM163B-202ENST00000496132 811 ntAPPRIS P1 TSL 3 BASIC18.02■□□□□ 0.48
SDHDO14521 C17orf107-202ENST00000521575 1275 ntAPPRIS ALT2 TSL 1 (best) BASIC18.02■□□□□ 0.48
SDHDO14521 TP53I11-215ENST00000531928 1078 ntTSL 3 BASIC18.02■□□□□ 0.48
SDHDO14521 MUS81-215ENST00000533035 2180 ntTSL 5 BASIC18.02■□□□□ 0.48
SDHDO14521 AC233263.1-201ENST00000578059 224 ntBASIC18.02■□□□□ 0.48
SDHDO14521 PSMD8-207ENST00000592035 1581 ntTSL 1 (best) BASIC18.02■□□□□ 0.48
SDHDO14521 AL445675.2-201ENST00000620291 557 ntBASIC18.02■□□□□ 0.48
SDHDO14521 C20orf204-205ENST00000636176 961 ntAPPRIS P5 TSL 5 BASIC18.02■□□□□ 0.48
SDHDO14521 KAZN-209ENST00000636564 1197 ntTSL 5 BASIC18.02■□□□□ 0.48
SDHDO14521 TPD52L1-202ENST00000368388 2147 ntTSL 1 (best) BASIC18.02■□□□□ 0.47
SDHDO14521 SKOR1-204ENST00000554240 3597 ntAPPRIS ALT2 TSL 5 BASIC18.02■□□□□ 0.47
SDHDO14521 PRSS36-201ENST00000268281 2840 ntAPPRIS P3 TSL 1 (best) BASIC18.02■□□□□ 0.47
SDHDO14521 GPBAR1-202ENST00000519574 1382 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.47
SDHDO14521 MXRA8-202ENST00000342753 2231 ntTSL 1 (best) BASIC18.02■□□□□ 0.47
SDHDO14521 RPS6KA5-201ENST00000418736 2249 ntTSL 1 (best) BASIC18.02■□□□□ 0.47
SDHDO14521 PLEKHG5-212ENST00000537245 4794 ntAPPRIS ALT2 TSL 2 BASIC18.02■□□□□ 0.47
SDHDO14521 ZDHHC23-201ENST00000330212 3778 ntAPPRIS P2 TSL 1 (best) BASIC18.02■□□□□ 0.47
SDHDO14521 TMC6-202ENST00000322914 2786 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.47
SDHDO14521 C14orf180-202ENST00000410013 2009 ntAPPRIS P3 TSL 1 (best) BASIC18.01■□□□□ 0.47
SDHDO14521 BACE1-203ENST00000428381 1333 ntTSL 1 (best) BASIC18.01■□□□□ 0.47
SDHDO14521 OLFM1-201ENST00000252854 2591 ntTSL 1 (best) BASIC18.01■□□□□ 0.47
SDHDO14521 TMC5-203ENST00000396229 4917 ntAPPRIS ALT2 TSL 5 BASIC18.01■□□□□ 0.47
SDHDO14521 HOTTIP-202ENST00000472494 2285 ntTSL 2 BASIC18.01■□□□□ 0.47
Retrieved 100 of 98,524 protein–RNA pairs in 27.3 ms