Protein–RNA interactions for Protein: O00442

RTCA, RNA 3'-terminal phosphate cyclase, humanhuman

Known RBP Predictions only

Length 366 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RTCAO00442 IGFBP4-201ENST00000269593 2200 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
RTCAO00442 TMPRSS5-205ENST00000538955 1956 ntAPPRIS ALT2 TSL 1 (best) BASIC17.8■□□□□ 0.44
RTCAO00442 YAP1-201ENST00000282441 5386 ntAPPRIS P3 TSL 1 (best) BASIC17.8■□□□□ 0.44
RTCAO00442 NTRK1-206ENST00000524377 2432 ntAPPRIS P3 TSL 1 (best) BASIC17.8■□□□□ 0.44
RTCAO00442 KLC1-217ENST00000554280 2426 ntTSL 5 BASIC17.8■□□□□ 0.44
RTCAO00442 NEFHP1-201ENST00000412845 2629 ntBASIC17.8■□□□□ 0.44
RTCAO00442 GPR75-201ENST00000394705 2115 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
RTCAO00442 CPSF3-201ENST00000238112 2345 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
RTCAO00442 MAFF-206ENST00000538320 2458 ntAPPRIS P1 TSL 4 BASIC17.79■□□□□ 0.44
RTCAO00442 ACSS3-201ENST00000261206 2666 ntAPPRIS ALT1 TSL 1 (best) BASIC17.79■□□□□ 0.44
RTCAO00442 KRT8-217ENST00000619952 2437 ntTSL 2 BASIC17.79■□□□□ 0.44
RTCAO00442 CHPF-203ENST00000535926 2634 ntTSL 2 BASIC17.79■□□□□ 0.44
RTCAO00442 P2RY6-201ENST00000349767 1700 ntAPPRIS P1 TSL 2 BASIC17.79■□□□□ 0.44
RTCAO00442 AC018755.2-202ENST00000429354 1926 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
RTCAO00442 KCNQ2-205ENST00000360480 2775 ntAPPRIS ALT2 TSL 5 BASIC17.79■□□□□ 0.44
RTCAO00442 MPC2-201ENST00000271373 798 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
RTCAO00442 TSPY14P-201ENST00000303979 915 ntBASIC17.79■□□□□ 0.44
RTCAO00442 CCDC34-201ENST00000317945 2109 ntAPPRIS P3 TSL 1 (best) BASIC17.79■□□□□ 0.44
RTCAO00442 LRRC27-203ENST00000368613 2113 ntAPPRIS P3 TSL 1 (best) BASIC17.79■□□□□ 0.44
RTCAO00442 NPM3-201ENST00000370110 877 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
RTCAO00442 TRAPPC3-204ENST00000373166 1265 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
RTCAO00442 FAM182B-202ENST00000376404 456 ntAPPRIS ALT2 BASIC17.79■□□□□ 0.44
RTCAO00442 C7orf50-203ENST00000397100 1264 ntAPPRIS P2 TSL 3 BASIC17.79■□□□□ 0.44
RTCAO00442 ACP1-205ENST00000407983 703 ntTSL 1 (best) BASIC17.79■□□□□ 0.44
RTCAO00442 HYAL3-203ENST00000415204 959 ntTSL 1 (best) BASIC17.79■□□□□ 0.44
RTCAO00442 ELF3-AS1-202ENST00000419190 788 ntTSL 2 BASIC17.79■□□□□ 0.44
RTCAO00442 AC007663.1-201ENST00000438948 1240 ntBASIC17.79■□□□□ 0.44
RTCAO00442 CCR12P-201ENST00000446203 998 ntBASIC17.79■□□□□ 0.44
RTCAO00442 TSPY17P-201ENST00000450329 467 ntBASIC17.79■□□□□ 0.44
RTCAO00442 IGHMBP2-205ENST00000539224 785 ntTSL 3 BASIC17.79■□□□□ 0.44
RTCAO00442 AC116562.4-202ENST00000641738 218 ntBASIC17.79■□□□□ 0.44
RTCAO00442 DISP3-202ENST00000304391 1495 ntTSL 1 (best) BASIC17.79■□□□□ 0.44
RTCAO00442 NPTX2-201ENST00000265634 2700 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
RTCAO00442 OSM-201ENST00000215781 1854 ntAPPRIS P3 TSL 1 (best) BASIC17.79■□□□□ 0.44
RTCAO00442 PSTPIP1-203ENST00000558012 1896 ntAPPRIS P2 TSL 1 (best) BASIC17.79■□□□□ 0.44
RTCAO00442 SAMD11-216ENST00000620200 1874 ntTSL 5 BASIC17.79■□□□□ 0.44
RTCAO00442 SPATA6L-207ENST00000475086 1444 ntAPPRIS P1 TSL 2 BASIC17.79■□□□□ 0.44
RTCAO00442 EXOSC3-201ENST00000327304 1806 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
RTCAO00442 SNX17-201ENST00000233575 2044 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
RTCAO00442 NEUROD2-201ENST00000302584 2041 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
RTCAO00442 PCBP3-206ENST00000400314 2202 ntAPPRIS P2 TSL 5 BASIC17.79■□□□□ 0.44
RTCAO00442 ACVR1B-203ENST00000426655 1782 ntTSL 2 BASIC17.79■□□□□ 0.44
RTCAO00442 SLC35A3-224ENST00000640732 1777 ntTSL 5 BASIC17.79■□□□□ 0.44
RTCAO00442 AC036111.1-201ENST00000533973 1582 ntBASIC17.79■□□□□ 0.44
RTCAO00442 TPSB2-203ENST00000612142 1352 ntAPPRIS P5 TSL 1 (best) BASIC17.79■□□□□ 0.44
RTCAO00442 MAPK8IP3-216ENST00000610761 5626 ntAPPRIS ALT1 TSL 1 (best) BASIC17.78■□□□□ 0.44
RTCAO00442 MAN1A1-201ENST00000368468 5014 ntAPPRIS P1 TSL 2 BASIC17.78■□□□□ 0.44
RTCAO00442 SEMA6C-210ENST00000621728 1918 ntTSL 1 (best) BASIC17.78■□□□□ 0.44
RTCAO00442 SH3BP1-201ENST00000357436 2852 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
RTCAO00442 TFCP2-205ENST00000549867 1727 ntTSL 5 BASIC17.78■□□□□ 0.44
RTCAO00442 HOXA9-201ENST00000343483 2060 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
RTCAO00442 ZNF302-206ENST00000505242 2849 ntAPPRIS P3 TSL 1 (best) BASIC17.78■□□□□ 0.44
RTCAO00442 LYPD3-201ENST00000244333 1694 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
RTCAO00442 TSSC4-201ENST00000333256 1686 ntAPPRIS P3 TSL 1 (best) BASIC17.78■□□□□ 0.44
RTCAO00442 TMEM198-202ENST00000373883 2218 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
RTCAO00442 SAMD11-210ENST00000616016 2391 ntTSL 5 BASIC17.78■□□□□ 0.44
RTCAO00442 SAMD11-215ENST00000618779 2368 ntAPPRIS ALT2 TSL 5 BASIC17.78■□□□□ 0.44
RTCAO00442 ATP6V1D-201ENST00000216442 1845 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
RTCAO00442 RABL2A-202ENST00000393165 1118 ntAPPRIS ALT2 TSL 1 (best) BASIC17.78■□□□□ 0.44
RTCAO00442 KRT8P12-201ENST00000468527 998 ntTSL 2 BASIC17.78■□□□□ 0.44
RTCAO00442 RARRES1-204ENST00000479756 839 ntTSL 1 (best) BASIC17.78■□□□□ 0.44
RTCAO00442 SIGLEC15-202ENST00000546268 1054 ntTSL 2 BASIC17.78■□□□□ 0.44
RTCAO00442 SLC39A2-203ENST00000554422 1259 ntTSL 1 (best) BASIC17.78■□□□□ 0.44
RTCAO00442 YPEL3-207ENST00000566134 761 ntTSL 5 BASIC17.78■□□□□ 0.44
RTCAO00442 PRR29-205ENST00000579184 1052 ntAPPRIS ALT2 TSL 2 BASIC17.78■□□□□ 0.44
RTCAO00442 STRN4-202ENST00000391910 3628 ntAPPRIS ALT1 TSL 5 BASIC17.78■□□□□ 0.44
RTCAO00442 CRHR2-207ENST00000471646 2530 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
RTCAO00442 KANK4-204ENST00000371153 4665 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
RTCAO00442 MCC-208ENST00000514701 2855 ntTSL 2 BASIC17.78■□□□□ 0.44
RTCAO00442 TIMM13-201ENST00000215570 1973 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
RTCAO00442 CCDC50-202ENST00000392456 2454 ntAPPRIS P4 TSL 1 (best) BASIC17.78■□□□□ 0.44
RTCAO00442 NPNT-203ENST00000427316 2481 ntAPPRIS ALT2 TSL 2 BASIC17.78■□□□□ 0.44
RTCAO00442 HOXC10-201ENST00000303460 1936 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
RTCAO00442 TRIM61-201ENST00000329314 1582 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
RTCAO00442 PNPLA2-201ENST00000336615 2428 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
RTCAO00442 RAX2-201ENST00000555633 2414 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
RTCAO00442 CDK5R1-201ENST00000313401 4325 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
RTCAO00442 MVB12A-201ENST00000317040 2223 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
RTCAO00442 NPR3-204ENST00000434067 2715 ntTSL 5 BASIC17.78■□□□□ 0.44
RTCAO00442 CHRM4-201ENST00000433765 1511 ntAPPRIS P1 BASIC17.77■□□□□ 0.44
RTCAO00442 KLHL40-201ENST00000287777 2517 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
RTCAO00442 RPS6KA1-204ENST00000374168 3186 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
RTCAO00442 BAG5-201ENST00000299204 4848 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
RTCAO00442 PDXK-219ENST00000621478 1967 ntTSL 1 (best) BASIC17.77■□□□□ 0.44
RTCAO00442 AC138028.1-201ENST00000333666 2137 ntTSL 2 BASIC17.77■□□□□ 0.44
RTCAO00442 SEMA3B-210ENST00000611067 2292 ntAPPRIS ALT2 TSL 1 (best) BASIC17.77■□□□□ 0.44
RTCAO00442 UMOD-202ENST00000396134 2408 ntAPPRIS ALT2 TSL 2 BASIC17.77■□□□□ 0.44
RTCAO00442 NR1H2-210ENST00000598168 1915 ntAPPRIS ALT2 TSL 5 BASIC17.77■□□□□ 0.44
RTCAO00442 PHOSPHO2-201ENST00000359744 1125 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
RTCAO00442 AIF1L-203ENST00000372298 849 ntTSL 3 BASIC17.77■□□□□ 0.44
RTCAO00442 PLEKHB2-203ENST00000404460 1167 ntTSL 2 BASIC17.77■□□□□ 0.44
RTCAO00442 AC087499.1-201ENST00000418141 1075 ntBASIC17.77■□□□□ 0.44
RTCAO00442 AL451069.1-201ENST00000455414 634 ntTSL 1 (best) BASIC17.77■□□□□ 0.44
RTCAO00442 AL365295.1-202ENST00000456100 562 ntTSL 4 BASIC17.77■□□□□ 0.44
RTCAO00442 ABHD11-207ENST00000458339 890 ntTSL 3 BASIC17.77■□□□□ 0.44
RTCAO00442 EGLN1P1-201ENST00000531623 762 ntBASIC17.77■□□□□ 0.44
RTCAO00442 PSMD9-208ENST00000542602 516 ntTSL 3 BASIC17.77■□□□□ 0.44
RTCAO00442 IRF3-222ENST00000599144 1117 ntTSL 1 (best) BASIC17.77■□□□□ 0.44
RTCAO00442 AL513523.10-201ENST00000623024 1186 ntAPPRIS P1 TSL 5 BASIC17.77■□□□□ 0.44
RTCAO00442 GSTZ1-204ENST00000393734 1424 ntTSL 5 BASIC17.77■□□□□ 0.44
Retrieved 100 of 98,524 protein–RNA pairs in 30.1 ms