Protein–RNA interactions for Protein: O00400

SLC33A1, Acetyl-coenzyme A transporter 1, humanhuman

Predicted RBP Predictions only

Length 549 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SLC33A1O00400 LRRC75A-AS1-205ENST00000475953 1201 ntTSL 1 (best) BASIC15.96■□□□□ 0.15
SLC33A1O00400 AL353593.2-202ENST00000602947 550 ntTSL 4 BASIC15.96■□□□□ 0.15
SLC33A1O00400 KRTAP5-11-203ENST00000617152 558 ntAPPRIS ALT2 TSL 5 BASIC15.96■□□□□ 0.15
SLC33A1O00400 GCDH-216ENST00000591470 1867 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.15
SLC33A1O00400 EGFR-202ENST00000342916 2239 ntTSL 1 (best) BASIC15.96■□□□□ 0.15
SLC33A1O00400 ZNF768-202ENST00000562803 1999 ntAPPRIS ALT2 TSL 3 BASIC15.96■□□□□ 0.15
SLC33A1O00400 CSF1-203ENST00000369801 1364 ntTSL 1 (best) BASIC15.96■□□□□ 0.15
SLC33A1O00400 ROPN1-209ENST00000495093 1376 ntTSL 1 (best) BASIC15.96■□□□□ 0.15
SLC33A1O00400 EDA-208ENST00000524573 1381 ntAPPRIS ALT1 TSL 1 (best) BASIC15.96■□□□□ 0.15
SLC33A1O00400 IDH3G-202ENST00000370092 1712 ntTSL 5 BASIC15.96■□□□□ 0.15
SLC33A1O00400 NFKB2-201ENST00000189444 3011 ntAPPRIS ALT1 TSL 1 (best) BASIC15.96■□□□□ 0.15
SLC33A1O00400 BACE2-203ENST00000347667 8764 ntTSL 1 (best) BASIC15.96■□□□□ 0.14
SLC33A1O00400 STOML1-209ENST00000564777 1849 ntTSL 1 (best) BASIC15.96■□□□□ 0.14
SLC33A1O00400 TTBK2-208ENST00000622375 6891 ntAPPRIS ALT2 TSL 1 (best) BASIC15.96■□□□□ 0.14
SLC33A1O00400 CREBBP-201ENST00000262367 10803 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.14
SLC33A1O00400 NKD2-201ENST00000274150 1940 ntAPPRIS ALT2 TSL 1 (best) BASIC15.96■□□□□ 0.14
SLC33A1O00400 TEPSIN-201ENST00000300714 2287 ntAPPRIS P2 TSL 1 (best) BASIC15.96■□□□□ 0.14
SLC33A1O00400 CYP46A1-202ENST00000380228 1597 ntTSL 2 BASIC15.96■□□□□ 0.14
SLC33A1O00400 SOCS3-201ENST00000330871 2734 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.14
SLC33A1O00400 SNAP47-201ENST00000315781 2367 ntAPPRIS P3 TSL 1 (best) BASIC15.95■□□□□ 0.14
SLC33A1O00400 DOLPP1-203ENST00000406974 2037 ntTSL 2 BASIC15.95■□□□□ 0.14
SLC33A1O00400 AK4-207ENST00000545314 6887 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
SLC33A1O00400 KRT13-202ENST00000336861 1673 ntAPPRIS ALT2 TSL 1 (best) BASIC15.95■□□□□ 0.14
SLC33A1O00400 RBFOX1-204ENST00000422070 1684 ntTSL 2 BASIC15.95■□□□□ 0.14
SLC33A1O00400 HTR7P1-201ENST00000538670 1336 ntBASIC15.95■□□□□ 0.14
SLC33A1O00400 AXIN1-201ENST00000262320 3643 ntAPPRIS P4 TSL 1 (best) BASIC15.95■□□□□ 0.14
SLC33A1O00400 PHKA1-205ENST00000541944 5944 ntAPPRIS ALT1 TSL 1 (best) BASIC15.95■□□□□ 0.14
SLC33A1O00400 BEGAIN-211ENST00000637646 2911 ntTSL 5 BASIC15.95■□□□□ 0.14
SLC33A1O00400 CDH23-205ENST00000398809 4533 ntTSL 5 BASIC15.95■□□□□ 0.14
SLC33A1O00400 AL031598.1-201ENST00000561511 1773 ntBASIC15.95■□□□□ 0.14
SLC33A1O00400 BTNL9-210ENST00000515271 1444 ntTSL 2 BASIC15.95■□□□□ 0.14
SLC33A1O00400 IFFO1-204ENST00000396840 2677 ntAPPRIS ALT1 TSL 5 BASIC15.95■□□□□ 0.14
SLC33A1O00400 NOMO2-211ENST00000621364 3921 ntAPPRIS ALT2 TSL 1 (best) BASIC15.95■□□□□ 0.14
SLC33A1O00400 PODXL2-201ENST00000342480 2186 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
SLC33A1O00400 AC005082.1-201ENST00000413042 2259 ntBASIC15.95■□□□□ 0.14
SLC33A1O00400 MAL-201ENST00000309988 1112 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
SLC33A1O00400 MTFP1-202ENST00000355143 891 ntTSL 2 BASIC15.95■□□□□ 0.14
SLC33A1O00400 CHPF-202ENST00000373891 1079 ntTSL 2 BASIC15.95■□□□□ 0.14
SLC33A1O00400 METTL5-206ENST00000409965 880 ntAPPRIS P2 TSL 1 (best) BASIC15.95■□□□□ 0.14
SLC33A1O00400 NDUFAF3-204ENST00000451378 774 ntTSL 1 (best) BASIC15.95■□□□□ 0.14
SLC33A1O00400 ASH1L-AS1-202ENST00000456633 911 ntTSL 2 BASIC15.95■□□□□ 0.14
SLC33A1O00400 AC073111.3-201ENST00000478789 635 ntAPPRIS P1 TSL 3 BASIC15.95■□□□□ 0.14
SLC33A1O00400 NDUFA13-203ENST00000503283 825 ntTSL 2 BASIC15.95■□□□□ 0.14
SLC33A1O00400 GLRB-205ENST00000512619 728 ntTSL 3 BASIC15.95■□□□□ 0.14
SLC33A1O00400 DENND3-207ENST00000518347 850 ntTSL 2 BASIC15.95■□□□□ 0.14
SLC33A1O00400 CDIPT-204ENST00000563415 1047 ntTSL 3 BASIC15.95■□□□□ 0.14
SLC33A1O00400 AC006504.5-207ENST00000586220 487 ntTSL 2 BASIC15.95■□□□□ 0.14
SLC33A1O00400 ZNF667-AS1-206ENST00000591797 535 ntTSL 5 BASIC15.95■□□□□ 0.14
SLC33A1O00400 MMD2-204ENST00000612910 778 ntTSL 5 BASIC15.95■□□□□ 0.14
SLC33A1O00400 TDRP-201ENST00000324079 3395 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
SLC33A1O00400 MCU-202ENST00000373053 2949 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
SLC33A1O00400 RAB11FIP5-205ENST00000486777 6120 ntTSL 5 BASIC15.95■□□□□ 0.14
SLC33A1O00400 PLIN5-201ENST00000381848 2470 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
SLC33A1O00400 YY1AP1-213ENST00000405763 2011 ntAPPRIS ALT2 TSL 1 (best) BASIC15.95■□□□□ 0.14
SLC33A1O00400 AMDHD2-201ENST00000293971 1459 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
SLC33A1O00400 DDHD1-202ENST00000357758 5603 ntAPPRIS P3 TSL 1 (best) BASIC15.95■□□□□ 0.14
SLC33A1O00400 LRRC27-203ENST00000368613 2113 ntAPPRIS P3 TSL 1 (best) BASIC15.95■□□□□ 0.14
SLC33A1O00400 AIPL1-209ENST00000575265 2111 ntAPPRIS ALT2 TSL 1 (best) BASIC15.95■□□□□ 0.14
SLC33A1O00400 ZAR1L-202ENST00000533490 1564 ntAPPRIS P1 TSL 5 BASIC15.95■□□□□ 0.14
SLC33A1O00400 VOPP1-201ENST00000285279 2962 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
SLC33A1O00400 NR2F1-201ENST00000327111 3732 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
SLC33A1O00400 DEF8-211ENST00000563795 1767 ntTSL 5 BASIC15.95■□□□□ 0.14
SLC33A1O00400 FDXR-217ENST00000582944 1766 ntTSL 2 BASIC15.95■□□□□ 0.14
SLC33A1O00400 DMD-208ENST00000378680 1858 ntTSL 1 (best) BASIC15.95■□□□□ 0.14
SLC33A1O00400 BEGAIN-202ENST00000443071 2744 ntTSL 1 (best) BASIC15.95■□□□□ 0.14
SLC33A1O00400 FBXO28-202ENST00000424254 1334 ntTSL 1 (best) BASIC15.94■□□□□ 0.14
SLC33A1O00400 P2RX3-204ENST00000616487 1346 ntTSL 5 BASIC15.94■□□□□ 0.14
SLC33A1O00400 SLC29A2-201ENST00000311161 2262 ntTSL 1 (best) BASIC15.94■□□□□ 0.14
SLC33A1O00400 ZDHHC8-202ENST00000334554 5046 ntAPPRIS P1 TSL 1 (best) BASIC15.94■□□□□ 0.14
SLC33A1O00400 PARVG-206ENST00000444313 3523 ntAPPRIS P1 TSL 1 (best) BASIC15.94■□□□□ 0.14
SLC33A1O00400 TH-202ENST00000333684 1535 ntTSL 1 (best) BASIC15.94■□□□□ 0.14
SLC33A1O00400 KANSL1L-201ENST00000281772 4754 ntAPPRIS P1 TSL 5 BASIC15.94■□□□□ 0.14
SLC33A1O00400 SNX11-203ENST00000452859 1601 ntTSL 2 BASIC15.94■□□□□ 0.14
SLC33A1O00400 TMEM74-201ENST00000297459 1741 ntAPPRIS P1 TSL 1 (best) BASIC15.94■□□□□ 0.14
SLC33A1O00400 DNAJC28-204ENST00000617313 2237 ntAPPRIS P1 TSL 5 BASIC15.94■□□□□ 0.14
SLC33A1O00400 FAM90A1-201ENST00000307435 2342 ntAPPRIS P1 TSL 2 BASIC15.94■□□□□ 0.14
SLC33A1O00400 SIVA1-201ENST00000329967 802 ntAPPRIS P2 TSL 1 (best) BASIC15.94■□□□□ 0.14
SLC33A1O00400 PTPA-216ENST00000432651 857 ntTSL 2 BASIC15.94■□□□□ 0.14
SLC33A1O00400 AP002982.1-201ENST00000492365 877 ntBASIC15.94■□□□□ 0.14
SLC33A1O00400 BAALC-AS1-207ENST00000522856 594 ntTSL 3 BASIC15.94■□□□□ 0.14
SLC33A1O00400 AP003501.2-201ENST00000524433 477 ntTSL 4 BASIC15.94■□□□□ 0.14
SLC33A1O00400 HLX-AS1-201ENST00000552026 563 ntTSL 4 BASIC15.94■□□□□ 0.14
SLC33A1O00400 AL353708.3-201ENST00000610272 989 ntBASIC15.94■□□□□ 0.14
SLC33A1O00400 AC131212.4-201ENST00000623606 975 ntBASIC15.94■□□□□ 0.14
SLC33A1O00400 SHISA6-204ENST00000441885 7575 ntAPPRIS P3 TSL 5 BASIC15.94■□□□□ 0.14
SLC33A1O00400 SERGEF-201ENST00000265965 1566 ntAPPRIS P1 TSL 1 (best) BASIC15.94■□□□□ 0.14
SLC33A1O00400 PSRC1-202ENST00000369904 1584 ntAPPRIS ALT2 TSL 1 (best) BASIC15.94■□□□□ 0.14
SLC33A1O00400 ACTR3B-203ENST00000397282 1692 ntTSL 2 BASIC15.94■□□□□ 0.14
SLC33A1O00400 PNKP-207ENST00000596014 1665 ntAPPRIS P1 TSL 1 (best) BASIC15.94■□□□□ 0.14
SLC33A1O00400 ACVR1B-203ENST00000426655 1782 ntTSL 2 BASIC15.94■□□□□ 0.14
SLC33A1O00400 Z98044.1-201ENST00000632503 1764 ntBASIC15.94■□□□□ 0.14
SLC33A1O00400 TCP11-204ENST00000373979 1882 ntAPPRIS P3 TSL 5 BASIC15.94■□□□□ 0.14
SLC33A1O00400 TH-205ENST00000381175 1898 ntTSL 1 (best) BASIC15.94■□□□□ 0.14
SLC33A1O00400 P2RX5-203ENST00000547178 1998 ntAPPRIS ALT2 TSL 1 (best) BASIC15.94■□□□□ 0.14
SLC33A1O00400 CCDC27-201ENST00000294600 2176 ntAPPRIS P1 TSL 1 (best) BASIC15.94■□□□□ 0.14
SLC33A1O00400 AIRE-201ENST00000291582 2257 ntAPPRIS P1 TSL 1 (best) BASIC15.94■□□□□ 0.14
SLC33A1O00400 RIPK2-201ENST00000220751 2584 ntAPPRIS P1 TSL 1 (best) BASIC15.94■□□□□ 0.14
SLC33A1O00400 AP3D1-201ENST00000345016 4870 ntAPPRIS P3 TSL 1 (best) BASIC15.94■□□□□ 0.14
SLC33A1O00400 KCTD2-201ENST00000322444 3635 ntAPPRIS P1 TSL 1 (best) BASIC15.94■□□□□ 0.14
SLC33A1O00400 CASC2-205ENST00000454781 2216 ntTSL 1 (best) BASIC15.94■□□□□ 0.14
Retrieved 100 of 98,524 protein–RNA pairs in 31.7 ms