Protein–RNA interactions for Protein: A8K010

LINC00473, Putative transcriptional regulator encoded by LINC00473, humanhuman

Predictions only

Length 186 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00473A8K010 TMPRSS9-205ENST00000613480 2568 ntTSL 1 (best) BASIC15.21■□□□□ 0.02
LINC00473A8K010 TTLL12-201ENST00000216129 3385 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.02
LINC00473A8K010 MAPRE3-201ENST00000233121 1892 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
LINC00473A8K010 CD1E-205ENST00000368160 1727 ntAPPRIS ALT2 TSL 1 (best) BASIC15.2■□□□□ 0.02
LINC00473A8K010 PSTK-201ENST00000368887 1705 ntAPPRIS P2 TSL 1 (best) BASIC15.2■□□□□ 0.02
LINC00473A8K010 CADPS2-202ENST00000334010 6045 ntAPPRIS ALT2 TSL 5 BASIC15.2■□□□□ 0.02
LINC00473A8K010 CLN3-206ENST00000360019 1840 ntTSL 2 BASIC15.2■□□□□ 0.02
LINC00473A8K010 PLK3-201ENST00000372201 2492 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
LINC00473A8K010 AC112777.1-201ENST00000540175 1423 ntBASIC15.2■□□□□ 0.02
LINC00473A8K010 KRT17-205ENST00000540235 1438 ntTSL 5 BASIC15.2■□□□□ 0.02
LINC00473A8K010 IFNL4-203ENST00000634680 1421 ntAPPRIS ALT2 TSL 1 (best) BASIC15.2■□□□□ 0.02
LINC00473A8K010 TRABD-201ENST00000303434 2329 ntAPPRIS P3 TSL 1 (best) BASIC15.2■□□□□ 0.02
LINC00473A8K010 SLC12A4-201ENST00000316341 4765 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
LINC00473A8K010 METTL21A-201ENST00000272839 1210 ntTSL 5 BASIC15.2■□□□□ 0.02
LINC00473A8K010 GYG2P1-201ENST00000357871 623 ntTSL 3 BASIC15.2■□□□□ 0.02
LINC00473A8K010 CHPF-202ENST00000373891 1079 ntTSL 2 BASIC15.2■□□□□ 0.02
LINC00473A8K010 B3GAT3P1-201ENST00000471720 806 ntBASIC15.2■□□□□ 0.02
LINC00473A8K010 ASPHD1-203ENST00000483405 1115 ntAPPRIS ALT2 TSL 3 BASIC15.2■□□□□ 0.02
LINC00473A8K010 AC008771.1-201ENST00000508000 1151 ntTSL 2 BASIC15.2■□□□□ 0.02
LINC00473A8K010 NDUFV2-AS1-201ENST00000582375 770 ntTSL 2 BASIC15.2■□□□□ 0.02
LINC00473A8K010 SMAD7-207ENST00000589634 1278 ntAPPRIS ALT1 TSL 4 BASIC15.2■□□□□ 0.02
LINC00473A8K010 FLT3LG-211ENST00000600429 984 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
LINC00473A8K010 AC010531.6-201ENST00000602282 401 ntTSL 2 BASIC15.2■□□□□ 0.02
LINC00473A8K010 MIR6786-201ENST00000616843 113 ntBASIC15.2■□□□□ 0.02
LINC00473A8K010 SLC35A2-213ENST00000635015 1008 ntTSL 2 BASIC15.2■□□□□ 0.02
LINC00473A8K010 ADAMTS16-203ENST00000511368 2682 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
LINC00473A8K010 APP-203ENST00000354192 3167 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
LINC00473A8K010 FPGS-201ENST00000373225 2278 ntTSL 2 BASIC15.2■□□□□ 0.02
LINC00473A8K010 KRT5-201ENST00000252242 2531 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
LINC00473A8K010 GPC2-201ENST00000292377 2532 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
LINC00473A8K010 PANX1-201ENST00000227638 2769 ntAPPRIS P2 TSL 1 (best) BASIC15.2■□□□□ 0.02
LINC00473A8K010 QSOX2-201ENST00000358701 4530 ntAPPRIS P1 TSL 2 BASIC15.2■□□□□ 0.02
LINC00473A8K010 DYNLL1-209ENST00000550845 1376 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
LINC00473A8K010 KIAA1324L-208ENST00000450689 6841 ntAPPRIS ALT2 TSL 5 BASIC15.2■□□□□ 0.02
LINC00473A8K010 TMC5-203ENST00000396229 4917 ntAPPRIS ALT2 TSL 5 BASIC15.2■□□□□ 0.02
LINC00473A8K010 LYSMD4-201ENST00000332728 2847 ntTSL 4 BASIC15.2■□□□□ 0.02
LINC00473A8K010 ZNF419-201ENST00000221735 2309 ntAPPRIS ALT2 TSL 1 (best) BASIC15.2■□□□□ 0.02
LINC00473A8K010 CAPN5-205ENST00000529629 2333 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
LINC00473A8K010 QPCTL-202ENST00000366382 1814 ntTSL 2 BASIC15.2■□□□□ 0.02
LINC00473A8K010 CHTOP-207ENST00000614256 1840 ntTSL 3 BASIC15.2■□□□□ 0.02
LINC00473A8K010 MFSD10-205ENST00000507555 1573 ntTSL 5 BASIC15.19■□□□□ 0.02
LINC00473A8K010 HTATSF1-204ENST00000535601 3019 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
LINC00473A8K010 EVX2-201ENST00000308618 4203 ntAPPRIS P1 TSL 5 BASIC15.19■□□□□ 0.02
LINC00473A8K010 MB21D2-201ENST00000392452 3368 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
LINC00473A8K010 NOV-201ENST00000259526 2522 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
LINC00473A8K010 GSEC-201ENST00000626810 2289 ntTSL 2 BASIC15.19■□□□□ 0.02
LINC00473A8K010 LYPD3-201ENST00000244333 1694 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
LINC00473A8K010 NAA35-201ENST00000361671 2649 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
LINC00473A8K010 TWIST2-202ENST00000612363 1404 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
LINC00473A8K010 CDK10-202ENST00000353379 1798 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
LINC00473A8K010 AC135776.1-201ENST00000319817 2481 ntBASIC15.19■□□□□ 0.02
LINC00473A8K010 SLC25A48-201ENST00000274513 1880 ntTSL 2 BASIC15.19■□□□□ 0.02
LINC00473A8K010 GGT3P-201ENST00000412448 2340 ntTSL 2 BASIC15.19■□□□□ 0.02
LINC00473A8K010 MDK-201ENST00000359803 985 ntAPPRIS P2 TSL 2 BASIC15.19■□□□□ 0.02
LINC00473A8K010 C7orf50-203ENST00000397100 1264 ntAPPRIS P2 TSL 3 BASIC15.19■□□□□ 0.02
LINC00473A8K010 ANKRD54-204ENST00000411961 946 ntTSL 5 BASIC15.19■□□□□ 0.02
LINC00473A8K010 HOTAIRM1-203ENST00000429611 722 ntTSL 1 (best) BASIC15.19■□□□□ 0.02
LINC00473A8K010 AP000697.1-201ENST00000430607 339 ntTSL 5 BASIC15.19■□□□□ 0.02
LINC00473A8K010 TMEM72-203ENST00000544540 1018 ntTSL 1 (best) BASIC15.19■□□□□ 0.02
LINC00473A8K010 ISG20-210ENST00000560741 800 ntAPPRIS P1 TSL 5 BASIC15.19■□□□□ 0.02
LINC00473A8K010 RPS15-203ENST00000586096 570 ntTSL 2 BASIC15.19■□□□□ 0.02
LINC00473A8K010 MYC-208ENST00000641036 567 ntBASIC15.19■□□□□ 0.02
LINC00473A8K010 ZNF114-206ENST00000600687 1742 ntAPPRIS P1 TSL 5 BASIC15.19■□□□□ 0.02
LINC00473A8K010 USP39-201ENST00000323701 2177 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
LINC00473A8K010 HAUS4-217ENST00000555367 1454 ntTSL 5 BASIC15.19■□□□□ 0.02
LINC00473A8K010 SEMA6C-210ENST00000621728 1918 ntTSL 1 (best) BASIC15.19■□□□□ 0.02
LINC00473A8K010 SOD2-206ENST00000452684 2045 ntTSL 1 (best) BASIC15.19■□□□□ 0.02
LINC00473A8K010 IDUA-210ENST00000514224 2130 ntTSL 2 BASIC15.19■□□□□ 0.02
LINC00473A8K010 TP53BP2-201ENST00000343537 4651 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
LINC00473A8K010 CD276-203ENST00000537340 2439 ntTSL 2 BASIC15.18■□□□□ 0.02
LINC00473A8K010 ALDOC-201ENST00000226253 1982 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
LINC00473A8K010 TDP2-202ENST00000378198 2071 ntAPPRIS P2 TSL 1 (best) BASIC15.18■□□□□ 0.02
LINC00473A8K010 CTNNBL1-204ENST00000405275 2076 ntTSL 5 BASIC15.18■□□□□ 0.02
LINC00473A8K010 HPS3-202ENST00000460120 2745 ntTSL 2 BASIC15.18■□□□□ 0.02
LINC00473A8K010 AC118553.2-202ENST00000638792 2729 ntAPPRIS ALT2 TSL 5 BASIC15.18■□□□□ 0.02
LINC00473A8K010 PHB2-203ENST00000535923 1515 ntAPPRIS P2 TSL 5 BASIC15.18■□□□□ 0.02
LINC00473A8K010 PLEKHG5-206ENST00000377748 5221 ntAPPRIS ALT2 TSL 2 BASIC15.18■□□□□ 0.02
LINC00473A8K010 ZNF131-206ENST00000505606 3209 ntAPPRIS P1 TSL 5 BASIC15.18■□□□□ 0.02
LINC00473A8K010 ENTPD6-209ENST00000433259 2654 ntTSL 5 BASIC15.18■□□□□ 0.02
LINC00473A8K010 NLGN2-204ENST00000575301 4374 ntAPPRIS P1 TSL 5 BASIC15.18■□□□□ 0.02
LINC00473A8K010 CD70-201ENST00000245903 913 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
LINC00473A8K010 UHRF2-202ENST00000381373 802 ntTSL 3 BASIC15.18■□□□□ 0.02
LINC00473A8K010 DMRT2-206ENST00000412350 1244 ntTSL 1 (best) BASIC15.18■□□□□ 0.02
LINC00473A8K010 PTTG1-205ENST00000520452 895 ntAPPRIS P1 TSL 3 BASIC15.18■□□□□ 0.02
LINC00473A8K010 AP002433.1-201ENST00000525548 964 ntTSL 3 BASIC15.18■□□□□ 0.02
LINC00473A8K010 EFTUD1P1-201ENST00000558187 596 ntTSL 4 BASIC15.18■□□□□ 0.02
LINC00473A8K010 AC091551.1-201ENST00000590722 1228 ntAPPRIS P1 TSL 2 BASIC15.18■□□□□ 0.02
LINC00473A8K010 AL359736.2-201ENST00000621992 437 ntBASIC15.18■□□□□ 0.02
LINC00473A8K010 FAM197Y4-202ENST00000622692 608 ntBASIC15.18■□□□□ 0.02
LINC00473A8K010 PLEKHG5-212ENST00000537245 4794 ntAPPRIS ALT2 TSL 2 BASIC15.18■□□□□ 0.02
LINC00473A8K010 AC008878.3-201ENST00000617428 4964 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
LINC00473A8K010 PRSS50-202ENST00000315170 1372 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
LINC00473A8K010 PDIA5-201ENST00000316218 1799 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
LINC00473A8K010 TMEM104-202ENST00000417024 1781 ntTSL 2 BASIC15.18■□□□□ 0.02
LINC00473A8K010 RUSC2-202ENST00000455600 5636 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
LINC00473A8K010 P2RY6-208ENST00000540124 2351 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
LINC00473A8K010 SMPD1-201ENST00000342245 2452 ntAPPRIS ALT1 TSL 1 (best) BASIC15.18■□□□□ 0.02
LINC00473A8K010 ZSWIM4-201ENST00000254323 4339 ntAPPRIS P1 TSL 2 BASIC15.18■□□□□ 0.02
LINC00473A8K010 IGSF9-206ENST00000611023 2663 ntTSL 1 (best) BASIC15.18■□□□□ 0.02
LINC00473A8K010 HERPUD2-202ENST00000396081 3057 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
Retrieved 100 of 98,524 protein–RNA pairs in 33.7 ms