Protein–RNA interactions for Protein: A0A576

TCRBV9S1A1T, T-cell receptor beta variable 3-1 (Fragment), humanhuman

Predictions only

Length 114 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TCRBV9S1A1TA0A576 TMEM218-214ENST00000532156 954 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
TCRBV9S1A1TA0A576 AC110285.5-201ENST00000611501 352 ntBASIC18.81■□□□□ 0.6
TCRBV9S1A1TA0A576 NXNL2-202ENST00000375855 1457 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
TCRBV9S1A1TA0A576 TEFM-205ENST00000581216 1891 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
TCRBV9S1A1TA0A576 MAEA-201ENST00000264750 2058 ntTSL 2 BASIC18.81■□□□□ 0.6
TCRBV9S1A1TA0A576 PLCL2-204ENST00000615277 4147 ntAPPRIS ALT2 TSL 1 (best) BASIC18.81■□□□□ 0.6
TCRBV9S1A1TA0A576 TBXA2R-204ENST00000589966 1814 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
TCRBV9S1A1TA0A576 STIM2-212ENST00000639640 2241 ntAPPRIS P3 TSL 1 (best) BASIC18.81■□□□□ 0.6
TCRBV9S1A1TA0A576 AP001476.1-201ENST00000451618 2198 ntTSL 2 BASIC18.81■□□□□ 0.6
TCRBV9S1A1TA0A576 CRYBB2P1-202ENST00000382734 1364 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
TCRBV9S1A1TA0A576 MYH7B-201ENST00000262873 6293 ntAPPRIS P2 TSL 1 (best) BASIC18.81■□□□□ 0.6
TCRBV9S1A1TA0A576 BMP8B-201ENST00000372827 4822 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
TCRBV9S1A1TA0A576 POLR1D-220ENST00000637071 1943 ntTSL 5 BASIC18.8■□□□□ 0.6
TCRBV9S1A1TA0A576 CDC14B-208ENST00000463569 1734 ntAPPRIS ALT2 TSL 5 BASIC18.8■□□□□ 0.6
TCRBV9S1A1TA0A576 RCC2P3-201ENST00000418112 1537 ntBASIC18.8■□□□□ 0.6
TCRBV9S1A1TA0A576 HOXD12-202ENST00000406506 1318 ntAPPRIS P1 TSL 3 BASIC18.8■□□□□ 0.6
TCRBV9S1A1TA0A576 P2RX3-204ENST00000616487 1346 ntTSL 5 BASIC18.8■□□□□ 0.6
TCRBV9S1A1TA0A576 APOA5-201ENST00000227665 1897 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
TCRBV9S1A1TA0A576 FBXO44-201ENST00000251546 1896 ntTSL 2 BASIC18.8■□□□□ 0.6
TCRBV9S1A1TA0A576 C21orf58-203ENST00000397680 2624 ntAPPRIS ALT2 TSL 2 BASIC18.8■□□□□ 0.6
TCRBV9S1A1TA0A576 CTSB-202ENST00000353047 3875 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
TCRBV9S1A1TA0A576 BPIFB3-201ENST00000375494 1454 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
TCRBV9S1A1TA0A576 HSPB6-201ENST00000004982 1457 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
TCRBV9S1A1TA0A576 RIOX2-201ENST00000333396 5347 ntAPPRIS ALT1 TSL 1 (best) BASIC18.8■□□□□ 0.6
TCRBV9S1A1TA0A576 CENPA-201ENST00000233505 1299 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
TCRBV9S1A1TA0A576 RTBDN-202ENST00000393233 1000 ntAPPRIS ALT2 TSL 3 BASIC18.8■□□□□ 0.6
TCRBV9S1A1TA0A576 LINC00595-207ENST00000476909 792 ntTSL 2 BASIC18.8■□□□□ 0.6
TCRBV9S1A1TA0A576 AC073111.3-201ENST00000478789 635 ntAPPRIS P1 TSL 3 BASIC18.8■□□□□ 0.6
TCRBV9S1A1TA0A576 REPIN1-210ENST00000482680 1029 ntTSL 2 BASIC18.8■□□□□ 0.6
TCRBV9S1A1TA0A576 IAH1-215ENST00000497473 1266 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
TCRBV9S1A1TA0A576 AC103746.1-201ENST00000617440 1133 ntTSL 3 BASIC18.8■□□□□ 0.6
TCRBV9S1A1TA0A576 ABBA01031674.1-201ENST00000635145 728 ntBASIC18.8■□□□□ 0.6
TCRBV9S1A1TA0A576 SLC35A3-218ENST00000639994 1114 ntTSL 5 BASIC18.8■□□□□ 0.6
TCRBV9S1A1TA0A576 ZNF394-201ENST00000337673 2179 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
TCRBV9S1A1TA0A576 DCBLD2-201ENST00000326840 6122 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
TCRBV9S1A1TA0A576 SHISA3-201ENST00000319234 1971 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
TCRBV9S1A1TA0A576 PAQR6-201ENST00000292291 1908 ntAPPRIS P3 TSL 1 (best) BASIC18.8■□□□□ 0.6
TCRBV9S1A1TA0A576 ZNF74-201ENST00000357502 2788 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
TCRBV9S1A1TA0A576 RAB4B-EGLN2-201ENST00000594136 2554 ntAPPRIS P1 TSL 2 BASIC18.8■□□□□ 0.6
TCRBV9S1A1TA0A576 PPAN-P2RY11-201ENST00000393796 2385 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
TCRBV9S1A1TA0A576 THAP12-201ENST00000260045 3300 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
TCRBV9S1A1TA0A576 LINC00574-201ENST00000420557 2318 ntTSL 2 BASIC18.79■□□□□ 0.6
TCRBV9S1A1TA0A576 SENP6-202ENST00000370010 4644 ntAPPRIS P3 TSL 1 (best) BASIC18.79■□□□□ 0.6
TCRBV9S1A1TA0A576 TRAF4-201ENST00000262395 2923 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
TCRBV9S1A1TA0A576 SNX11-203ENST00000452859 1601 ntTSL 2 BASIC18.79■□□□□ 0.6
TCRBV9S1A1TA0A576 FAM131A-202ENST00000340957 2421 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
TCRBV9S1A1TA0A576 PDZRN3-202ENST00000308537 1136 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
TCRBV9S1A1TA0A576 ISG20-202ENST00000379224 540 ntTSL 3 BASIC18.79■□□□□ 0.6
TCRBV9S1A1TA0A576 PSMG1-202ENST00000380900 907 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
TCRBV9S1A1TA0A576 RPS2P4-201ENST00000476944 856 ntBASIC18.79■□□□□ 0.6
TCRBV9S1A1TA0A576 ADGRD1-AS1-202ENST00000542980 1277 ntTSL 4 BASIC18.79■□□□□ 0.6
TCRBV9S1A1TA0A576 EMC9-206ENST00000560403 872 ntTSL 2 BASIC18.79■□□□□ 0.6
TCRBV9S1A1TA0A576 AC087498.1-201ENST00000572493 945 ntAPPRIS P1 BASIC18.79■□□□□ 0.6
TCRBV9S1A1TA0A576 TYROBP-209ENST00000589517 415 ntAPPRIS ALT1 TSL 1 (best) BASIC18.79■□□□□ 0.6
TCRBV9S1A1TA0A576 AL353708.3-201ENST00000610272 989 ntBASIC18.79■□□□□ 0.6
TCRBV9S1A1TA0A576 PTGER3-209ENST00000460330 1447 ntAPPRIS ALT2 TSL 1 (best) BASIC18.79■□□□□ 0.6
TCRBV9S1A1TA0A576 MSI2-203ENST00000416426 1714 ntTSL 2 BASIC18.79■□□□□ 0.6
TCRBV9S1A1TA0A576 AC087500.1-202ENST00000571689 1715 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
TCRBV9S1A1TA0A576 MST1R-214ENST00000613534 2025 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
TCRBV9S1A1TA0A576 SPC24-206ENST00000592540 2315 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
TCRBV9S1A1TA0A576 ROPN1-209ENST00000495093 1376 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
TCRBV9S1A1TA0A576 ANXA3-201ENST00000264908 1657 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
TCRBV9S1A1TA0A576 POLD3-203ENST00000527458 2122 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
TCRBV9S1A1TA0A576 TRIM8-201ENST00000302424 2831 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
TCRBV9S1A1TA0A576 SEMA6C-210ENST00000621728 1918 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
TCRBV9S1A1TA0A576 FKBP8-206ENST00000596558 1756 ntAPPRIS ALT1 TSL 2 BASIC18.78■□□□□ 0.6
TCRBV9S1A1TA0A576 SMN1-209ENST00000514951 1308 ntTSL 2 BASIC18.78■□□□□ 0.6
TCRBV9S1A1TA0A576 CCDC157-203ENST00000405659 3052 ntAPPRIS P3 TSL 1 (best) BASIC18.78■□□□□ 0.6
TCRBV9S1A1TA0A576 FOXD4L1-201ENST00000306507 2491 ntAPPRIS P1 BASIC18.78■□□□□ 0.6
TCRBV9S1A1TA0A576 CMPK2-201ENST00000256722 2884 ntAPPRIS P3 TSL 1 (best) BASIC18.78■□□□□ 0.6
TCRBV9S1A1TA0A576 NLE1-201ENST00000360831 1726 ntTSL 5 BASIC18.78■□□□□ 0.6
TCRBV9S1A1TA0A576 ZNF500-202ENST00000545009 2440 ntTSL 2 BASIC18.78■□□□□ 0.6
TCRBV9S1A1TA0A576 TPPP3-204ENST00000562206 1410 ntAPPRIS P1 TSL 2 BASIC18.78■□□□□ 0.6
TCRBV9S1A1TA0A576 ST6GALNAC6-201ENST00000291839 2280 ntAPPRIS P3 TSL 1 (best) BASIC18.78■□□□□ 0.6
TCRBV9S1A1TA0A576 NDUFB10-201ENST00000268668 705 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
TCRBV9S1A1TA0A576 PMAIP1-201ENST00000269518 1262 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
TCRBV9S1A1TA0A576 ALDH4A1-201ENST00000290597 2124 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
TCRBV9S1A1TA0A576 CMTM8-201ENST00000307526 1174 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
TCRBV9S1A1TA0A576 CMTM7-202ENST00000349718 1214 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
TCRBV9S1A1TA0A576 TMEM35B-201ENST00000373337 922 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
TCRBV9S1A1TA0A576 RALGPS1-206ENST00000394011 819 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
TCRBV9S1A1TA0A576 TLCD1-202ENST00000394933 784 ntTSL 2 BASIC18.78■□□□□ 0.6
TCRBV9S1A1TA0A576 HOXA9-202ENST00000396345 797 ntTSL 2 BASIC18.78■□□□□ 0.6
TCRBV9S1A1TA0A576 C7orf50-203ENST00000397100 1264 ntAPPRIS P2 TSL 3 BASIC18.78■□□□□ 0.6
TCRBV9S1A1TA0A576 ESRRAP1-201ENST00000400596 1257 ntBASIC18.78■□□□□ 0.6
TCRBV9S1A1TA0A576 AC004951.3-201ENST00000418645 1148 ntBASIC18.78■□□□□ 0.6
TCRBV9S1A1TA0A576 RN7SL471P-201ENST00000580476 299 ntBASIC18.78■□□□□ 0.6
TCRBV9S1A1TA0A576 LRRC27-201ENST00000344079 1809 ntAPPRIS ALT2 TSL 2 BASIC18.78■□□□□ 0.6
TCRBV9S1A1TA0A576 CHTOP-207ENST00000614256 1840 ntTSL 3 BASIC18.78■□□□□ 0.6
TCRBV9S1A1TA0A576 LTB4R2-202ENST00000528054 3092 ntBASIC18.78■□□□□ 0.6
TCRBV9S1A1TA0A576 ACBD4-215ENST00000592162 1684 ntTSL 5 BASIC18.78■□□□□ 0.6
TCRBV9S1A1TA0A576 PGM5-202ENST00000396396 3338 ntAPPRIS P1 TSL 2 BASIC18.78■□□□□ 0.6
TCRBV9S1A1TA0A576 OBSL1-203ENST00000373876 5503 ntTSL 5 BASIC18.78■□□□□ 0.6
TCRBV9S1A1TA0A576 PARD3-205ENST00000374773 3420 ntTSL 5 BASIC18.78■□□□□ 0.6
TCRBV9S1A1TA0A576 PNMA6E-201ENST00000445091 2192 ntAPPRIS P1 TSL 2 BASIC18.78■□□□□ 0.6
TCRBV9S1A1TA0A576 SMARCC1-201ENST00000254480 6375 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
TCRBV9S1A1TA0A576 IQSEC1-201ENST00000273221 5279 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
TCRBV9S1A1TA0A576 TMEM214-201ENST00000238788 2990 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
TCRBV9S1A1TA0A576 PRODH-205ENST00000420436 2034 ntAPPRIS ALT2 TSL 2 BASIC18.78■□□□□ 0.6
TCRBV9S1A1TA0A576 AL034417.2-201ENST00000445300 2044 ntTSL 2 BASIC18.78■□□□□ 0.6
Retrieved 100 of 98,524 protein–RNA pairs in 34.1 ms