Protein–RNA interactions for Protein: A0A0C4DH25

IGKV3D-20, Immunoglobulin kappa variable 3D-20, humanhuman

Predictions only

Length 116 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
IGKV3D-20A0A0C4DH25 IZUMO2-201ENST00000293405 728 ntAPPRIS P2 TSL 1 (best) BASIC13.9□□□□□ -0.18
IGKV3D-20A0A0C4DH25 RAC3-201ENST00000306897 1090 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
IGKV3D-20A0A0C4DH25 MRPS24-201ENST00000317534 707 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
IGKV3D-20A0A0C4DH25 PSEN1-203ENST00000394157 1249 ntTSL 2 BASIC13.9□□□□□ -0.18
IGKV3D-20A0A0C4DH25 FKBP2-202ENST00000394540 1002 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
IGKV3D-20A0A0C4DH25 GUSBP6-202ENST00000438529 1198 ntBASIC13.9□□□□□ -0.18
IGKV3D-20A0A0C4DH25 ARF3-202ENST00000447318 1089 ntTSL 2 BASIC13.9□□□□□ -0.18
IGKV3D-20A0A0C4DH25 CENPS-CORT-202ENST00000465026 494 ntTSL 3 BASIC13.9□□□□□ -0.18
IGKV3D-20A0A0C4DH25 CENPS-CORT-203ENST00000470413 626 ntTSL 2 BASIC13.9□□□□□ -0.18
IGKV3D-20A0A0C4DH25 C1orf52-203ENST00000471115 1219 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
IGKV3D-20A0A0C4DH25 KCNMA1-220ENST00000481070 896 ntTSL 2 BASIC13.9□□□□□ -0.18
IGKV3D-20A0A0C4DH25 ABCC3-217ENST00000515707 656 ntTSL 3 BASIC13.9□□□□□ -0.18
IGKV3D-20A0A0C4DH25 MIR4758-201ENST00000577688 71 ntBASIC13.9□□□□□ -0.18
IGKV3D-20A0A0C4DH25 KLF2-202ENST00000592003 564 ntTSL 3 BASIC13.9□□□□□ -0.18
IGKV3D-20A0A0C4DH25 AC008687.6-201ENST00000596318 630 ntBASIC13.9□□□□□ -0.18
IGKV3D-20A0A0C4DH25 HIST1H2AL-201ENST00000613174 393 ntAPPRIS P1 BASIC13.9□□□□□ -0.18
IGKV3D-20A0A0C4DH25 LGALS9C-209ENST00000581545 1378 ntTSL 5 BASIC13.9□□□□□ -0.18
IGKV3D-20A0A0C4DH25 DTWD1-202ENST00000403028 1584 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
IGKV3D-20A0A0C4DH25 TYMS-203ENST00000323274 1662 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
IGKV3D-20A0A0C4DH25 IVNS1ABP-202ENST00000367498 4199 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
IGKV3D-20A0A0C4DH25 DLC1-203ENST00000358919 4392 ntAPPRIS ALT2 TSL 1 (best) BASIC13.9□□□□□ -0.18
IGKV3D-20A0A0C4DH25 SIN3A-203ENST00000394949 4930 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
IGKV3D-20A0A0C4DH25 NARFL-201ENST00000251588 2112 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
IGKV3D-20A0A0C4DH25 DCLK1-203ENST00000379892 2101 ntTSL 5 BASIC13.9□□□□□ -0.18
IGKV3D-20A0A0C4DH25 FAM49B-214ENST00000519540 2021 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
IGKV3D-20A0A0C4DH25 FN3KRP-201ENST00000269373 1849 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
IGKV3D-20A0A0C4DH25 ZHX3-212ENST00000558993 1528 ntTSL 5 BASIC13.9□□□□□ -0.19
IGKV3D-20A0A0C4DH25 UBQLN4-201ENST00000368309 3576 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
IGKV3D-20A0A0C4DH25 APP-203ENST00000354192 3167 ntTSL 1 (best) BASIC13.89□□□□□ -0.19
IGKV3D-20A0A0C4DH25 EIF3B-201ENST00000360876 3055 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
IGKV3D-20A0A0C4DH25 AFG3L1P-203ENST00000418696 2965 ntTSL 2 BASIC13.89□□□□□ -0.19
IGKV3D-20A0A0C4DH25 TRIM41-202ENST00000351937 2696 ntTSL 1 (best) BASIC13.89□□□□□ -0.19
IGKV3D-20A0A0C4DH25 ADAMTS16-203ENST00000511368 2682 ntTSL 1 (best) BASIC13.89□□□□□ -0.19
IGKV3D-20A0A0C4DH25 ZNF394-201ENST00000337673 2179 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
IGKV3D-20A0A0C4DH25 ACSM2A-201ENST00000219054 1988 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
IGKV3D-20A0A0C4DH25 GLYCTK-202ENST00000436784 1982 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
IGKV3D-20A0A0C4DH25 RXRB-202ENST00000374685 2846 ntAPPRIS ALT1 TSL 1 (best) BASIC13.89□□□□□ -0.19
IGKV3D-20A0A0C4DH25 AC118553.2-202ENST00000638792 2729 ntAPPRIS ALT2 TSL 5 BASIC13.89□□□□□ -0.19
IGKV3D-20A0A0C4DH25 C21orf58-203ENST00000397680 2624 ntAPPRIS ALT2 TSL 2 BASIC13.89□□□□□ -0.19
IGKV3D-20A0A0C4DH25 HLA-G-205ENST00000428701 1578 ntAPPRIS P2 BASIC13.89□□□□□ -0.19
IGKV3D-20A0A0C4DH25 NPIPA8-201ENST00000525596 1565 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
IGKV3D-20A0A0C4DH25 CDH23-205ENST00000398809 4533 ntTSL 5 BASIC13.89□□□□□ -0.19
IGKV3D-20A0A0C4DH25 PTGER3-203ENST00000354608 1470 ntAPPRIS ALT2 TSL 5 BASIC13.89□□□□□ -0.19
IGKV3D-20A0A0C4DH25 TSC22D4-202ENST00000393991 1469 ntTSL 2 BASIC13.89□□□□□ -0.19
IGKV3D-20A0A0C4DH25 VEGFB-201ENST00000309422 1380 ntAPPRIS P3 TSL 1 (best) BASIC13.89□□□□□ -0.19
IGKV3D-20A0A0C4DH25 SP3-203ENST00000418194 3937 ntAPPRIS ALT2 TSL 1 (best) BASIC13.89□□□□□ -0.19
IGKV3D-20A0A0C4DH25 SLC29A4P1-201ENST00000398760 971 ntBASIC13.89□□□□□ -0.19
IGKV3D-20A0A0C4DH25 TSPY6P-201ENST00000448518 926 ntBASIC13.89□□□□□ -0.19
IGKV3D-20A0A0C4DH25 AC006970.2-201ENST00000450065 779 ntBASIC13.89□□□□□ -0.19
IGKV3D-20A0A0C4DH25 TTTY14-205ENST00000454875 544 ntTSL 2 BASIC13.89□□□□□ -0.19
IGKV3D-20A0A0C4DH25 C11orf24-209ENST00000533310 980 ntAPPRIS ALT2 TSL 5 BASIC13.89□□□□□ -0.19
IGKV3D-20A0A0C4DH25 SOX15-202ENST00000538513 1050 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
IGKV3D-20A0A0C4DH25 SOX15-203ENST00000570788 1093 ntBASIC13.89□□□□□ -0.19
IGKV3D-20A0A0C4DH25 HLA-A-209ENST00000638375 975 ntBASIC13.89□□□□□ -0.19
IGKV3D-20A0A0C4DH25 ARNT-212ENST00000515192 2892 ntTSL 1 (best) BASIC13.89□□□□□ -0.19
IGKV3D-20A0A0C4DH25 CIZ1-226ENST00000629610 2855 ntAPPRIS ALT2 TSL 2 BASIC13.89□□□□□ -0.19
IGKV3D-20A0A0C4DH25 ZNF74-201ENST00000357502 2788 ntTSL 1 (best) BASIC13.89□□□□□ -0.19
IGKV3D-20A0A0C4DH25 SLC9A6-208ENST00000636206 4711 ntTSL 1 (best) BASIC13.89□□□□□ -0.19
IGKV3D-20A0A0C4DH25 RUNX2-201ENST00000359524 5390 ntTSL 1 (best) BASIC13.89□□□□□ -0.19
IGKV3D-20A0A0C4DH25 CD1E-205ENST00000368160 1727 ntAPPRIS ALT2 TSL 1 (best) BASIC13.89□□□□□ -0.19
IGKV3D-20A0A0C4DH25 MYC-207ENST00000621592 2366 ntAPPRIS ALT1 TSL 1 (best) BASIC13.89□□□□□ -0.19
IGKV3D-20A0A0C4DH25 FAM83A-205ENST00000522648 1604 ntTSL 1 (best) BASIC13.89□□□□□ -0.19
IGKV3D-20A0A0C4DH25 DMRT3-201ENST00000190165 2183 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
IGKV3D-20A0A0C4DH25 NKD2-202ENST00000296849 2155 ntAPPRIS P3 TSL 1 (best) BASIC13.89□□□□□ -0.19
IGKV3D-20A0A0C4DH25 AL499627.1-201ENST00000569373 2188 ntBASIC13.89□□□□□ -0.19
IGKV3D-20A0A0C4DH25 SCARB1-203ENST00000415380 2731 ntTSL 2 BASIC13.89□□□□□ -0.19
IGKV3D-20A0A0C4DH25 APOLD1-202ENST00000356591 4646 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
IGKV3D-20A0A0C4DH25 NECTIN3-211ENST00000493615 1876 ntAPPRIS ALT2 TSL 2 BASIC13.89□□□□□ -0.19
IGKV3D-20A0A0C4DH25 GGT3P-201ENST00000412448 2340 ntTSL 2 BASIC13.89□□□□□ -0.19
IGKV3D-20A0A0C4DH25 CAPN5-205ENST00000529629 2333 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
IGKV3D-20A0A0C4DH25 SPC24-206ENST00000592540 2315 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
IGKV3D-20A0A0C4DH25 CCDC120-204ENST00000597275 2752 ntAPPRIS P3 TSL 2 BASIC13.88□□□□□ -0.19
IGKV3D-20A0A0C4DH25 IDUA-210ENST00000514224 2130 ntTSL 2 BASIC13.88□□□□□ -0.19
IGKV3D-20A0A0C4DH25 FOXD4L1-201ENST00000306507 2491 ntAPPRIS P1 BASIC13.88□□□□□ -0.19
IGKV3D-20A0A0C4DH25 TSPAN3-210ENST00000561277 1592 ntTSL 5 BASIC13.88□□□□□ -0.19
IGKV3D-20A0A0C4DH25 RRP7BP-201ENST00000357802 2375 ntTSL 1 (best) BASIC13.88□□□□□ -0.19
IGKV3D-20A0A0C4DH25 LETM2-208ENST00000524874 1459 ntTSL 5 BASIC13.88□□□□□ -0.19
IGKV3D-20A0A0C4DH25 CCDC43-201ENST00000315286 2082 ntAPPRIS P2 TSL 1 (best) BASIC13.88□□□□□ -0.19
IGKV3D-20A0A0C4DH25 SPSB1-203ENST00000377399 1007 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
IGKV3D-20A0A0C4DH25 MRPS26-201ENST00000380325 1127 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
IGKV3D-20A0A0C4DH25 ANKRD39-201ENST00000393537 976 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
IGKV3D-20A0A0C4DH25 DLX3-202ENST00000512495 834 ntTSL 2 BASIC13.88□□□□□ -0.19
IGKV3D-20A0A0C4DH25 FXYD1-204ENST00000588081 645 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
IGKV3D-20A0A0C4DH25 AL137784.2-201ENST00000607332 1000 ntBASIC13.88□□□□□ -0.19
IGKV3D-20A0A0C4DH25 MMP25-204ENST00000612971 1017 ntTSL 5 BASIC13.88□□□□□ -0.19
IGKV3D-20A0A0C4DH25 PTN-201ENST00000348225 1614 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
IGKV3D-20A0A0C4DH25 AHR-201ENST00000242057 6276 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
IGKV3D-20A0A0C4DH25 LURAP1-201ENST00000371980 1854 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
IGKV3D-20A0A0C4DH25 ZNF324-203ENST00000536459 5653 ntAPPRIS P1 TSL 2 BASIC13.88□□□□□ -0.19
IGKV3D-20A0A0C4DH25 KANK1-204ENST00000382293 5249 ntTSL 1 (best) BASIC13.88□□□□□ -0.19
IGKV3D-20A0A0C4DH25 HSPA4-205ENST00000617074 2358 ntTSL 5 BASIC13.88□□□□□ -0.19
IGKV3D-20A0A0C4DH25 XKR4-203ENST00000622811 3907 ntAPPRIS P1 TSL 5 BASIC13.88□□□□□ -0.19
IGKV3D-20A0A0C4DH25 SLC39A5-201ENST00000266980 2031 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
IGKV3D-20A0A0C4DH25 TMEM230-206ENST00000379283 1660 ntAPPRIS P1 TSL 3 BASIC13.88□□□□□ -0.19
IGKV3D-20A0A0C4DH25 AATK-AS1-203ENST00000637878 1306 ntAPPRIS P1 TSL 5 BASIC13.88□□□□□ -0.19
IGKV3D-20A0A0C4DH25 MAFK-201ENST00000343242 3368 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
IGKV3D-20A0A0C4DH25 AK4-207ENST00000545314 6887 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
IGKV3D-20A0A0C4DH25 TDRKH-207ENST00000458431 2768 ntAPPRIS P2 TSL 1 (best) BASIC13.88□□□□□ -0.19
IGKV3D-20A0A0C4DH25 DUS1L-202ENST00000354321 2151 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
IGKV3D-20A0A0C4DH25 RCC2P6-201ENST00000526625 1557 ntBASIC13.88□□□□□ -0.19
Retrieved 100 of 98,524 protein–RNA pairs in 28.1 ms