Protein–RNA interactions for Protein: A0A0B4J235

TRAV13-2, T-cell receptor alpha variable 13-2 (Fragment), humanhuman

Predictions only

Length 113 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRAV13-2A0A0B4J235 EPS8L2-205ENST00000526198 2289 ntAPPRIS ALT2 TSL 1 (best) BASIC12.33□□□□□ -0.44
TRAV13-2A0A0B4J235 RGS14-201ENST00000408923 2415 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
TRAV13-2A0A0B4J235 PCDHA12-202ENST00000613593 2588 ntBASIC12.33□□□□□ -0.44
TRAV13-2A0A0B4J235 PIP4K2C-202ENST00000422156 1558 ntTSL 2 BASIC12.33□□□□□ -0.44
TRAV13-2A0A0B4J235 PSRC1-201ENST00000369903 1710 ntAPPRIS P3 TSL 5 BASIC12.33□□□□□ -0.44
TRAV13-2A0A0B4J235 PSRC1-206ENST00000409267 1730 ntAPPRIS P3 TSL 5 BASIC12.33□□□□□ -0.44
TRAV13-2A0A0B4J235 RHOF-201ENST00000267205 3009 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
TRAV13-2A0A0B4J235 SULT1A1-204ENST00000395609 1871 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
TRAV13-2A0A0B4J235 CYP2U1-201ENST00000332884 4944 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
TRAV13-2A0A0B4J235 NBL1-210ENST00000615215 2160 ntAPPRIS ALT2 TSL 1 (best) BASIC12.33□□□□□ -0.44
TRAV13-2A0A0B4J235 WNT5B-202ENST00000397196 2303 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
TRAV13-2A0A0B4J235 CARNS1-201ENST00000307823 3942 ntTSL 1 (best) BASIC12.33□□□□□ -0.44
TRAV13-2A0A0B4J235 FAM50B-201ENST00000380272 1628 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
TRAV13-2A0A0B4J235 MYC-207ENST00000621592 2366 ntAPPRIS ALT1 TSL 1 (best) BASIC12.33□□□□□ -0.44
TRAV13-2A0A0B4J235 SPOCK2-202ENST00000373109 5445 ntAPPRIS P2 TSL 1 (best) BASIC12.32□□□□□ -0.44
TRAV13-2A0A0B4J235 ABCB9-207ENST00000442833 2587 ntTSL 1 (best) BASIC12.32□□□□□ -0.44
TRAV13-2A0A0B4J235 DTNB-209ENST00000407038 2294 ntTSL 1 (best) BASIC12.32□□□□□ -0.44
TRAV13-2A0A0B4J235 CCDC74A-201ENST00000295171 1543 ntAPPRIS P3 TSL 1 (best) BASIC12.32□□□□□ -0.44
TRAV13-2A0A0B4J235 HEXIM2-201ENST00000307275 1528 ntAPPRIS P1 TSL 2 BASIC12.32□□□□□ -0.44
TRAV13-2A0A0B4J235 CCDC74B-201ENST00000310463 1549 ntAPPRIS P3 TSL 2 BASIC12.32□□□□□ -0.44
TRAV13-2A0A0B4J235 ALKBH6-213ENST00000486389 1525 ntTSL 3 BASIC12.32□□□□□ -0.44
TRAV13-2A0A0B4J235 NFE2-204ENST00000553070 1523 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
TRAV13-2A0A0B4J235 ANKRD6-201ENST00000339746 3073 ntAPPRIS ALT1 TSL 1 (best) BASIC12.32□□□□□ -0.44
TRAV13-2A0A0B4J235 PDZD7-201ENST00000370215 2032 ntTSL 2 BASIC12.32□□□□□ -0.44
TRAV13-2A0A0B4J235 GRAMD2B-218ENST00000542322 2977 ntTSL 2 BASIC12.32□□□□□ -0.44
TRAV13-2A0A0B4J235 RRS1-201ENST00000320270 1706 ntAPPRIS P1 BASIC12.32□□□□□ -0.44
TRAV13-2A0A0B4J235 CXorf49-202ENST00000535490 1715 ntAPPRIS P1 TSL 5 BASIC12.32□□□□□ -0.44
TRAV13-2A0A0B4J235 CXorf49B-202ENST00000542739 1715 ntAPPRIS P1 TSL 5 BASIC12.32□□□□□ -0.44
TRAV13-2A0A0B4J235 TPD52L1-213ENST00000534000 2356 ntAPPRIS P3 TSL 1 (best) BASIC12.32□□□□□ -0.44
TRAV13-2A0A0B4J235 ELP5-214ENST00000574993 2209 ntTSL 1 (best) BASIC12.32□□□□□ -0.44
TRAV13-2A0A0B4J235 PCMTD2-202ENST00000299468 1049 ntTSL 5 BASIC12.32□□□□□ -0.44
TRAV13-2A0A0B4J235 LARP6-202ENST00000344870 527 ntTSL 1 (best) BASIC12.32□□□□□ -0.44
TRAV13-2A0A0B4J235 CALM3-202ENST00000391918 702 ntTSL 2 BASIC12.32□□□□□ -0.44
TRAV13-2A0A0B4J235 GUSBP5-201ENST00000418136 578 ntBASIC12.32□□□□□ -0.44
TRAV13-2A0A0B4J235 TRAPPC5-202ENST00000426877 765 ntAPPRIS P1 TSL 2 BASIC12.32□□□□□ -0.44
TRAV13-2A0A0B4J235 INTS11-205ENST00000429572 1104 ntTSL 2 BASIC12.32□□□□□ -0.44
TRAV13-2A0A0B4J235 CDKN2A-206ENST00000494262 989 ntTSL 3 BASIC12.32□□□□□ -0.44
TRAV13-2A0A0B4J235 ATPIF1-204ENST00000497986 599 ntTSL 2 BASIC12.32□□□□□ -0.44
TRAV13-2A0A0B4J235 AL137779.2-201ENST00000554859 448 ntTSL 2 BASIC12.32□□□□□ -0.44
TRAV13-2A0A0B4J235 AP005205.2-201ENST00000577327 491 ntTSL 2 BASIC12.32□□□□□ -0.44
TRAV13-2A0A0B4J235 MIR663AHG-233ENST00000609248 830 ntTSL 5 BASIC12.32□□□□□ -0.44
TRAV13-2A0A0B4J235 AC092902.2-206ENST00000625484 846 ntTSL 5 BASIC12.32□□□□□ -0.44
TRAV13-2A0A0B4J235 MYC-208ENST00000641036 567 ntBASIC12.32□□□□□ -0.44
TRAV13-2A0A0B4J235 BAG1-212ENST00000641048 1038 ntAPPRIS P3 BASIC12.32□□□□□ -0.44
TRAV13-2A0A0B4J235 CLDN9-201ENST00000445369 2050 ntAPPRIS P1 BASIC12.32□□□□□ -0.44
TRAV13-2A0A0B4J235 ZNF264-202ENST00000536056 2078 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
TRAV13-2A0A0B4J235 EXD3-201ENST00000340951 2872 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
TRAV13-2A0A0B4J235 SLC22A1-202ENST00000366963 1948 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
TRAV13-2A0A0B4J235 TMEM235-203ENST00000550981 1786 ntTSL 2 BASIC12.32□□□□□ -0.44
TRAV13-2A0A0B4J235 CCDC50-201ENST00000392455 8429 ntAPPRIS ALT1 TSL 1 (best) BASIC12.32□□□□□ -0.44
TRAV13-2A0A0B4J235 CCDC88C-203ENST00000389856 1641 ntTSL 1 (best) BASIC12.32□□□□□ -0.44
TRAV13-2A0A0B4J235 FAM208A-201ENST00000355628 5239 ntAPPRIS ALT2 TSL 1 (best) BASIC12.32□□□□□ -0.44
TRAV13-2A0A0B4J235 SH3BP4-203ENST00000409212 5231 ntAPPRIS P1 TSL 5 BASIC12.32□□□□□ -0.44
TRAV13-2A0A0B4J235 TP53INP1-201ENST00000342697 5638 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
TRAV13-2A0A0B4J235 TSG101-201ENST00000251968 1824 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
TRAV13-2A0A0B4J235 ERICH1-201ENST00000262109 1813 ntAPPRIS P2 TSL 1 (best) BASIC12.32□□□□□ -0.44
TRAV13-2A0A0B4J235 GPS1-201ENST00000306823 1842 ntAPPRIS P3 TSL 1 (best) BASIC12.32□□□□□ -0.44
TRAV13-2A0A0B4J235 LINC00574-201ENST00000420557 2318 ntTSL 2 BASIC12.32□□□□□ -0.44
TRAV13-2A0A0B4J235 MVB12B-201ENST00000361171 4819 ntAPPRIS P1 TSL 2 BASIC12.32□□□□□ -0.44
TRAV13-2A0A0B4J235 ALK-201ENST00000389048 6220 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
TRAV13-2A0A0B4J235 SCARF1-205ENST00000571272 2871 ntAPPRIS ALT2 TSL 1 (best) BASIC12.32□□□□□ -0.44
TRAV13-2A0A0B4J235 SOCS2-212ENST00000622746 2881 ntAPPRIS P1 TSL 3 BASIC12.32□□□□□ -0.44
TRAV13-2A0A0B4J235 CIZ1-226ENST00000629610 2855 ntAPPRIS ALT2 TSL 2 BASIC12.32□□□□□ -0.44
TRAV13-2A0A0B4J235 C16orf59-204ENST00000563531 1864 ntAPPRIS ALT2 TSL 5 BASIC12.31□□□□□ -0.44
TRAV13-2A0A0B4J235 AVPR1B-201ENST00000367126 2237 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
TRAV13-2A0A0B4J235 SH2B1-216ENST00000618521 2935 ntTSL 1 (best) BASIC12.31□□□□□ -0.44
TRAV13-2A0A0B4J235 AC007326.2-201ENST00000624224 7579 ntBASIC12.31□□□□□ -0.44
TRAV13-2A0A0B4J235 DISC1-209ENST00000439617 7059 ntAPPRIS ALT2 TSL 5 BASIC12.31□□□□□ -0.44
TRAV13-2A0A0B4J235 LRRC56-201ENST00000270115 2769 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
TRAV13-2A0A0B4J235 DKK3-201ENST00000326932 2636 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
TRAV13-2A0A0B4J235 TNIP1-211ENST00000521591 2274 ntAPPRIS P3 TSL 1 (best) BASIC12.31□□□□□ -0.44
TRAV13-2A0A0B4J235 AD000671.2-201ENST00000589807 1925 ntAPPRIS P1 TSL 2 BASIC12.31□□□□□ -0.44
TRAV13-2A0A0B4J235 TNRC18P3-201ENST00000441896 2691 ntBASIC12.31□□□□□ -0.44
TRAV13-2A0A0B4J235 GOLGA7-204ENST00000520817 1984 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
TRAV13-2A0A0B4J235 GPC2-201ENST00000292377 2532 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
TRAV13-2A0A0B4J235 GAL3ST4-201ENST00000360039 2537 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
TRAV13-2A0A0B4J235 DNPH1-201ENST00000230431 657 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
TRAV13-2A0A0B4J235 FAM160B1-201ENST00000369246 666 ntTSL 2 BASIC12.31□□□□□ -0.44
TRAV13-2A0A0B4J235 C9orf47-202ENST00000375850 859 ntAPPRIS ALT2 TSL 3 BASIC12.31□□□□□ -0.44
TRAV13-2A0A0B4J235 MCRIP2P1-201ENST00000394346 511 ntBASIC12.31□□□□□ -0.44
TRAV13-2A0A0B4J235 AC093627.4-202ENST00000479592 591 ntTSL 4 BASIC12.31□□□□□ -0.44
TRAV13-2A0A0B4J235 ZNF467-202ENST00000484747 913 ntTSL 2 BASIC12.31□□□□□ -0.44
TRAV13-2A0A0B4J235 LINC01574-201ENST00000512115 560 ntTSL 2 BASIC12.31□□□□□ -0.44
TRAV13-2A0A0B4J235 POLR2E-214ENST00000619917 932 ntTSL 5 BASIC12.31□□□□□ -0.44
TRAV13-2A0A0B4J235 AC105020.6-201ENST00000621523 1217 ntBASIC12.31□□□□□ -0.44
TRAV13-2A0A0B4J235 LBX1-AS1-201ENST00000430651 2553 ntTSL 2 BASIC12.31□□□□□ -0.44
TRAV13-2A0A0B4J235 ZNF589-203ENST00000427617 1677 ntTSL 2 BASIC12.31□□□□□ -0.44
TRAV13-2A0A0B4J235 GOSR2-210ENST00000576910 1891 ntAPPRIS ALT1 TSL 5 BASIC12.31□□□□□ -0.44
TRAV13-2A0A0B4J235 PILRB-208ENST00000452089 2099 ntAPPRIS P2 TSL 2 BASIC12.31□□□□□ -0.44
TRAV13-2A0A0B4J235 SMPD3-211ENST00000568373 2073 ntTSL 1 (best) BASIC12.31□□□□□ -0.44
TRAV13-2A0A0B4J235 SLC30A5-201ENST00000380860 1317 ntTSL 1 (best) BASIC12.31□□□□□ -0.44
TRAV13-2A0A0B4J235 AD000864.1-201ENST00000624076 2295 ntBASIC12.31□□□□□ -0.44
TRAV13-2A0A0B4J235 STXBP3-201ENST00000370008 2478 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
TRAV13-2A0A0B4J235 HDAC10-201ENST00000216271 2687 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
TRAV13-2A0A0B4J235 P2RY6-201ENST00000349767 1700 ntAPPRIS P1 TSL 2 BASIC12.31□□□□□ -0.44
TRAV13-2A0A0B4J235 SATB2-203ENST00000428695 2135 ntTSL 1 (best) BASIC12.31□□□□□ -0.44
TRAV13-2A0A0B4J235 NFAM1-201ENST00000329021 5602 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
TRAV13-2A0A0B4J235 MYRIP-202ENST00000396217 4877 ntTSL 1 (best) BASIC12.31□□□□□ -0.44
TRAV13-2A0A0B4J235 ANKRD2-201ENST00000298808 1350 ntTSL 1 (best) BASIC12.3□□□□□ -0.44
TRAV13-2A0A0B4J235 AC006064.2-201ENST00000501075 2196 ntTSL 2 BASIC12.3□□□□□ -0.44
Retrieved 100 of 98,524 protein–RNA pairs in 31.9 ms